RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 RPGRIP1Q96KN7 1286 aa8.16□□□□□ -1.1
HDAC3-216ENST00000523088 NR1H4Q96RI1 486 aaPredicted RBP8.16□□□□□ -1.1
HDAC3-216ENST00000523088 CDK5RAP2Q96SN8 1893 aa8.16□□□□□ -1.1
HDAC3-216ENST00000523088 KCTD10Q9H3F6 313 aa8.16□□□□□ -1.1
HDAC3-216ENST00000523088 PARVBQ9HBI1 364 aa8.16□□□□□ -1.1
HDAC3-216ENST00000523088 LRP2BPQ9P2M1 347 aa8.16□□□□□ -1.1
HDAC3-216ENST00000523088 FZD1Q9UP38 647 aa8.16□□□□□ -1.1
HDAC3-216ENST00000523088 KCNH4Q9UQ05 1017 aa8.16□□□□□ -1.1
HDAC3-216ENST00000523088 MAFBQ9Y5Q3 323 aaPredicted RBP8.16□□□□□ -1.1
HDAC3-216ENST00000523088 KIAA0100Q14667 2235 aaKnown RBP8.15□□□□□ -1.1
HDAC3-216ENST00000523088 MGAMO43451 1857 aa8.15□□□□□ -1.1
HDAC3-216ENST00000523088 PNMA6EA0A0J9YXQ4 647 aa8.15□□□□□ -1.1
HDAC3-216ENST00000523088 C17orf113A0A1B0GUU1 675 aa8.15□□□□□ -1.1
HDAC3-216ENST00000523088 POTEFA5A3E0 1075 aa8.15□□□□□ -1.1
HDAC3-216ENST00000523088 KRBA1A5PL33 1030 aa8.15□□□□□ -1.1
HDAC3-216ENST00000523088 PALM3A6NDB9 673 aaPredicted RBP8.15□□□□□ -1.1
HDAC3-216ENST00000523088 LRRC72A6NJI9 287 aa8.15□□□□□ -1.1
HDAC3-216ENST00000523088 INO80B-WBP1J3KQ70 363 aa8.15□□□□□ -1.1
HDAC3-216ENST00000523088 ZBTB14O43829 449 aa8.15□□□□□ -1.1
HDAC3-216ENST00000523088 TLR2O60603 784 aa8.15□□□□□ -1.1
HDAC3-216ENST00000523088 CTNND1O60716 968 aaKnown RBP8.15□□□□□ -1.1
HDAC3-216ENST00000523088 SURF6O75683 361 aaKnown RBP8.15□□□□□ -1.1
HDAC3-216ENST00000523088 GJA5P36382 358 aa8.15□□□□□ -1.1
HDAC3-216ENST00000523088 PSMC4P43686 418 aa8.15□□□□□ -1.1
HDAC3-216ENST00000523088 ACADSBP45954 432 aa8.15□□□□□ -1.1
HDAC3-216ENST00000523088 NR2C2P49116 596 aa8.15□□□□□ -1.1
HDAC3-216ENST00000523088 SARSP49591 514 aaKnown RBP8.15□□□□□ -1.1
HDAC3-216ENST00000523088 SCNN1BP51168 640 aa8.15□□□□□ -1.1
HDAC3-216ENST00000523088 MAP3K10Q02779 954 aa8.15□□□□□ -1.1
HDAC3-216ENST00000523088 TCP10Q12799 353 aa8.15□□□□□ -1.1
HDAC3-216ENST00000523088 MSLNQ13421 630 aaPredicted RBP8.15□□□□□ -1.1
HDAC3-216ENST00000523088 KCNB1Q14721 858 aa8.15□□□□□ -1.1
HDAC3-216ENST00000523088 ZBTB41Q5SVQ8 909 aa8.15□□□□□ -1.1
HDAC3-216ENST00000523088 PRPF38BQ5VTL8 546 aaKnown RBP8.15□□□□□ -1.1
HDAC3-216ENST00000523088 CCDC62Q6P9F0 684 aa8.15□□□□□ -1.1
HDAC3-216ENST00000523088 TUBA3EQ6PEY2 450 aa8.15□□□□□ -1.1
HDAC3-216ENST00000523088 TMCO3Q6UWJ1 677 aa8.15□□□□□ -1.1
HDAC3-216ENST00000523088 OTOP1Q7RTM1 612 aa8.15□□□□□ -1.1
HDAC3-216ENST00000523088 LRRTM3Q86VH5 581 aa8.15□□□□□ -1.1
HDAC3-216ENST00000523088 CAND1Q86VP6 1230 aaKnown RBP8.15□□□□□ -1.1
HDAC3-216ENST00000523088 RAVER1Q8IY67 606 aaKnown RBP8.15□□□□□ -1.1
HDAC3-216ENST00000523088 SPICE1Q8N0Z3 855 aa8.15□□□□□ -1.1
HDAC3-216ENST00000523088 TMCO5AQ8N6Q1 288 aa8.15□□□□□ -1.1
HDAC3-216ENST00000523088 DEPTORQ8TB45 409 aa8.15□□□□□ -1.1
HDAC3-216ENST00000523088 FAM200AQ8TCP9 573 aa8.15□□□□□ -1.1
HDAC3-216ENST00000523088 BRI3BPQ8WY22 251 aa8.15□□□□□ -1.1
HDAC3-216ENST00000523088 PARK7Q99497 189 aaKnown RBP8.15□□□□□ -1.1
HDAC3-216ENST00000523088 ACBD3Q9H3P7 528 aa8.15□□□□□ -1.1
HDAC3-216ENST00000523088 POLMQ9NP87 494 aaPredicted RBP8.15□□□□□ -1.1
HDAC3-216ENST00000523088 HMG20BQ9P0W2 317 aa8.15□□□□□ -1.1
HDAC3-216ENST00000523088 SCHIP1Q9P0W5 487 aaPredicted RBP8.15□□□□□ -1.1
HDAC3-216ENST00000523088 FAM198AQ9UFP1 575 aa8.15□□□□□ -1.1
HDAC3-216ENST00000523088 DDX19BQ9UMR2 479 aa8.15□□□□□ -1.1
HDAC3-216ENST00000523088 R3HDM2Q9Y2K5 976 aaKnown RBP8.15□□□□□ -1.1
HDAC3-216ENST00000523088 SH3GLB1Q9Y371 365 aa8.15□□□□□ -1.1
HDAC3-216ENST00000523088 SLC4A4Q9Y6R1 1079 aa8.15□□□□□ -1.1
HDAC3-216ENST00000523088 FPGT-TNNI3KV9GXZ4 949 aa8.15□□□□□ -1.1
HDAC3-216ENST00000523088 PHIPQ8WWQ0 1821 aa8.15□□□□□ -1.11
HDAC3-216ENST00000523088 MYH1P12882 1939 aa8.14□□□□□ -1.11
HDAC3-216ENST00000523088 C9IYK1 514 aa8.14□□□□□ -1.11
HDAC3-216ENST00000523088 TOR1BO14657 336 aa8.14□□□□□ -1.11
HDAC3-216ENST00000523088 ZBTB7BO15156 539 aaPredicted RBP8.14□□□□□ -1.11
HDAC3-216ENST00000523088 DNAJC8O75937 253 aaPredicted RBP8.14□□□□□ -1.11
HDAC3-216ENST00000523088 URI1O94763 535 aaPredicted RBP8.14□□□□□ -1.11
HDAC3-216ENST00000523088 EIF2S1P05198 315 aaKnown RBP8.14□□□□□ -1.11
HDAC3-216ENST00000523088 IL10P22301 178 aa8.14□□□□□ -1.11
HDAC3-216ENST00000523088 SLC8A1P32418 973 aa8.14□□□□□ -1.11
HDAC3-216ENST00000523088 MAPKAPK2P49137 400 aa8.14□□□□□ -1.11
HDAC3-216ENST00000523088 PPM1FP49593 454 aaPredicted RBP8.14□□□□□ -1.11
HDAC3-216ENST00000523088 ATN1P54259 1190 aaPredicted RBP8.14□□□□□ -1.11
HDAC3-216ENST00000523088 SEC13P55735 322 aa8.14□□□□□ -1.11
HDAC3-216ENST00000523088 NFIAQ12857 509 aa8.14□□□□□ -1.11
HDAC3-216ENST00000523088 PPP2R5CQ13362 524 aa8.14□□□□□ -1.11
HDAC3-216ENST00000523088 SLC14A2Q15849 920 aa8.14□□□□□ -1.11
HDAC3-216ENST00000523088 NFE2Q16621 373 aaPredicted RBP8.14□□□□□ -1.11
HDAC3-216ENST00000523088 FAM83BQ5T0W9 1011 aa8.14□□□□□ -1.11
HDAC3-216ENST00000523088 MIS18BP1Q6P0N0 1132 aa8.14□□□□□ -1.11
HDAC3-216ENST00000523088 CABP7Q86V35 215 aa8.14□□□□□ -1.11
HDAC3-216ENST00000523088 NLRP14Q86W24 1093 aa8.14□□□□□ -1.11
HDAC3-216ENST00000523088 CDAN1Q8IWY9 1227 aa8.14□□□□□ -1.11
HDAC3-216ENST00000523088 SMARCC2Q8TAQ2 1214 aa8.14□□□□□ -1.11
HDAC3-216ENST00000523088 SMARCE1Q969G3 411 aa8.14□□□□□ -1.11
HDAC3-216ENST00000523088 NSUN4Q96CB9 384 aaKnown RBP8.14□□□□□ -1.11
HDAC3-216ENST00000523088 HIC2Q96JB3 615 aa8.14□□□□□ -1.11
HDAC3-216ENST00000523088 HNRNPABQ99729 332 aaKnown RBP8.14□□□□□ -1.11
HDAC3-216ENST00000523088 PTPN18Q99952 460 aa8.14□□□□□ -1.11
HDAC3-216ENST00000523088 APOL5Q9BWW9 433 aa8.14□□□□□ -1.11
HDAC3-216ENST00000523088 HOMER2Q9NSB8 354 aa8.14□□□□□ -1.11
HDAC3-216ENST00000523088 TAGLN3Q9UI15 199 aa8.14□□□□□ -1.11
HDAC3-216ENST00000523088 PNMA3Q9UL41 463 aa8.14□□□□□ -1.11
HDAC3-216ENST00000523088 STRIP2Q9ULQ0 834 aa8.14□□□□□ -1.11
HDAC3-216ENST00000523088 PTPN22Q9Y2R2 807 aa8.14□□□□□ -1.11
HDAC3-216ENST00000523088 LOC285556D6RIA3 1793 aa8.14□□□□□ -1.11
HDAC3-216ENST00000523088 MYH7P12883 1935 aa8.13□□□□□ -1.11
HDAC3-216ENST00000523088 MYO5AQ9Y4I1 1855 aaKnown RBP8.13□□□□□ -1.11
HDAC3-216ENST00000523088 HTR3EA5X5Y0 456 aa8.13□□□□□ -1.11
HDAC3-216ENST00000523088 B4DLN1 442 aa8.13□□□□□ -1.11
HDAC3-216ENST00000523088 BTBD19C9JJ37 291 aa8.13□□□□□ -1.11
HDAC3-216ENST00000523088 K7ENM7 598 aa8.13□□□□□ -1.11
HDAC3-216ENST00000523088 HAT1O14929 419 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms