RNA–Protein interactions for RNA: ENST00000522720.1

PABPC1-221, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 4

Gene PABPC1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-221ENST00000522720 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.17■□□□□ 0.5
PABPC1-221ENST00000522720 KCTD17Q8N5Z5 321 aa18.17■□□□□ 0.5
PABPC1-221ENST00000522720 MRPL38Q96DV4 380 aaKnown RBP18.17■□□□□ 0.5
PABPC1-221ENST00000522720 CASD1Q96PB1 797 aa18.17■□□□□ 0.5
PABPC1-221ENST00000522720 C11orf84Q9BUA3 381 aaPredicted RBP18.17■□□□□ 0.5
PABPC1-221ENST00000522720 FAM105AQ9NUU6 356 aa18.17■□□□□ 0.5
PABPC1-221ENST00000522720 UNC80Q8N2C7 3258 aa18.17■□□□□ 0.5
PABPC1-221ENST00000522720 KIAA1671Q9BY89 1806 aa18.16■□□□□ 0.5
PABPC1-221ENST00000522720 REV3LO60673 3130 aa18.16■□□□□ 0.5
PABPC1-221ENST00000522720 E9PMD0 336 aa18.16■□□□□ 0.5
PABPC1-221ENST00000522720 INO80B-WBP1J3KQ70 363 aa18.16■□□□□ 0.5
PABPC1-221ENST00000522720 ERLIN2O94905 339 aa18.16■□□□□ 0.5
PABPC1-221ENST00000522720 AXLP30530 894 aa18.16■□□□□ 0.5
PABPC1-221ENST00000522720 RAB27AP51159 221 aa18.16■□□□□ 0.5
PABPC1-221ENST00000522720 MBTD1Q05BQ5 628 aa18.16■□□□□ 0.5
PABPC1-221ENST00000522720 PTPROQ16827 1216 aa18.16■□□□□ 0.5
PABPC1-221ENST00000522720 NAALADL2Q58DX5 795 aa18.16■□□□□ 0.5
PABPC1-221ENST00000522720 CLLU1OSQ5K130 101 aa18.16■□□□□ 0.5
PABPC1-221ENST00000522720 ABI1Q8IZP0 508 aa18.16■□□□□ 0.5
PABPC1-221ENST00000522720 RNF169Q8NCN4 708 aa18.16■□□□□ 0.5
PABPC1-221ENST00000522720 P2RX5Q93086 422 aa18.16■□□□□ 0.5
PABPC1-221ENST00000522720 PNMA5Q96PV4 448 aa18.16■□□□□ 0.5
PABPC1-221ENST00000522720 ZSCAN16Q9H4T2 348 aaPredicted RBP18.16■□□□□ 0.5
PABPC1-221ENST00000522720 TYW1Q9NV66 732 aaKnown RBP18.16■□□□□ 0.5
PABPC1-221ENST00000522720 BRWD1Q9NSI6 2320 aa18.16■□□□□ 0.5
PABPC1-221ENST00000522720 SLC26A4O43511 780 aa18.15■□□□□ 0.5
PABPC1-221ENST00000522720 TSPAN1O60635 241 aa18.15■□□□□ 0.5
PABPC1-221ENST00000522720 NCBP1Q09161 790 aaKnown RBP18.15■□□□□ 0.5
PABPC1-221ENST00000522720 PTPAQ15257 358 aa18.15■□□□□ 0.5
PABPC1-221ENST00000522720 ZRSR1Q15695 479 aaKnown RBP18.15■□□□□ 0.5
PABPC1-221ENST00000522720 AMHR2Q16671 573 aa18.15■□□□□ 0.5
PABPC1-221ENST00000522720 FAM173BQ6P4H8 233 aa18.15■□□□□ 0.5
PABPC1-221ENST00000522720 KCNK18Q7Z418 384 aa18.15■□□□□ 0.5
PABPC1-221ENST00000522720 KIFAP3Q92845 792 aa18.15■□□□□ 0.5
PABPC1-221ENST00000522720 NT5C3AQ9H0P0 336 aa18.15■□□□□ 0.5
PABPC1-221ENST00000522720 PCDHB2Q9Y5E7 798 aa18.15■□□□□ 0.5
PABPC1-221ENST00000522720 CLIC4Q9Y696 253 aa18.15■□□□□ 0.5
PABPC1-221ENST00000522720 LRRIQ4A6NIV6 560 aa18.14■□□□□ 0.49
PABPC1-221ENST00000522720 GRM6O15303 877 aa18.14■□□□□ 0.49
PABPC1-221ENST00000522720 HSP90AA1P07900 732 aaKnown RBP18.14■□□□□ 0.49
PABPC1-221ENST00000522720 PDIA4P13667 645 aaKnown RBP18.14■□□□□ 0.49
PABPC1-221ENST00000522720 LONP1P36776 959 aaKnown RBP18.14■□□□□ 0.49
PABPC1-221ENST00000522720 NAMPTP43490 491 aa18.14■□□□□ 0.49
PABPC1-221ENST00000522720 GRIN1Q05586 938 aa18.14■□□□□ 0.49
PABPC1-221ENST00000522720 PPP2R5AQ15172 486 aa18.14■□□□□ 0.49
PABPC1-221ENST00000522720 UBXN11Q5T124 520 aa18.14■□□□□ 0.49
PABPC1-221ENST00000522720 SPOUT1Q5T280 376 aaKnown RBP18.14■□□□□ 0.49
PABPC1-221ENST00000522720 CDCA2Q69YH5 1023 aaPredicted RBP18.14■□□□□ 0.49
PABPC1-221ENST00000522720 LRRC55Q6ZSA7 311 aa18.14■□□□□ 0.49
PABPC1-221ENST00000522720 MRPL10Q7Z7H8 261 aaKnown RBP18.14■□□□□ 0.49
PABPC1-221ENST00000522720 CABP7Q86V35 215 aa18.14■□□□□ 0.49
PABPC1-221ENST00000522720 RSPH1Q8WYR4 309 aa18.14■□□□□ 0.49
PABPC1-221ENST00000522720 BSNDQ8WZ55 320 aa18.14■□□□□ 0.49
PABPC1-221ENST00000522720 CCDC51Q96ER9 411 aa18.14■□□□□ 0.49
PABPC1-221ENST00000522720 LMAN2LQ9H0V9 348 aa18.14■□□□□ 0.49
PABPC1-221ENST00000522720 CWH43Q9H720 699 aa18.14■□□□□ 0.49
PABPC1-221ENST00000522720 PRDM6Q9NQX0 595 aa18.14■□□□□ 0.49
PABPC1-221ENST00000522720 AAASQ9NRG9 546 aa18.14■□□□□ 0.49
PABPC1-221ENST00000522720 PLAGL2Q9UPG8 496 aa18.14■□□□□ 0.49
PABPC1-221ENST00000522720 PCDHB12Q9Y5F1 795 aa18.14■□□□□ 0.49
PABPC1-221ENST00000522720 ARF4P18085 180 aaPredicted RBP18.13■□□□□ 0.49
PABPC1-221ENST00000522720 UBA7P41226 1012 aa18.13■□□□□ 0.49
PABPC1-221ENST00000522720 TMEM119Q4V9L6 283 aa18.13■□□□□ 0.49
PABPC1-221ENST00000522720 RINT1Q6NUQ1 792 aa18.13■□□□□ 0.49
PABPC1-221ENST00000522720 NOTUMQ6P988 496 aa18.13■□□□□ 0.49
PABPC1-221ENST00000522720 C1orf186Q6ZWK4 172 aa18.13■□□□□ 0.49
PABPC1-221ENST00000522720 ZBTB8OSQ8IWT0 167 aa18.13■□□□□ 0.49
PABPC1-221ENST00000522720 LRRC43Q8N309 656 aa18.13■□□□□ 0.49
PABPC1-221ENST00000522720 KLHL23Q8NBE8 558 aa18.13■□□□□ 0.49
PABPC1-221ENST00000522720 HELQQ8TDG4 1101 aa18.13■□□□□ 0.49
PABPC1-221ENST00000522720 LPPQ93052 612 aa18.13■□□□□ 0.49
PABPC1-221ENST00000522720 PGBD4Q96DM1 585 aa18.13■□□□□ 0.49
PABPC1-221ENST00000522720 CDK5RAP3Q96JB5 506 aa18.13■□□□□ 0.49
PABPC1-221ENST00000522720 PLIN2Q99541 437 aa18.13■□□□□ 0.49
PABPC1-221ENST00000522720 C2orf40Q9H1Z8 148 aa18.13■□□□□ 0.49
PABPC1-221ENST00000522720 FZD8Q9H461 694 aa18.13■□□□□ 0.49
PABPC1-221ENST00000522720 POLD4Q9HCU8 107 aa18.13■□□□□ 0.49
PABPC1-221ENST00000522720 HCSTQ9UBK5 93 aa18.13■□□□□ 0.49
PABPC1-221ENST00000522720 ITGB1P05556 798 aa18.12■□□□□ 0.49
PABPC1-221ENST00000522720 LAG3P18627 525 aa18.12■□□□□ 0.49
PABPC1-221ENST00000522720 SKIV2LQ15477 1246 aaKnown RBP18.12■□□□□ 0.49
PABPC1-221ENST00000522720 FAM187BQ17R55 369 aa18.12■□□□□ 0.49
PABPC1-221ENST00000522720 LONRF3Q496Y0 759 aa18.12■□□□□ 0.49
PABPC1-221ENST00000522720 PPP4R3CPQ6ZMV5 832 aa18.12■□□□□ 0.49
PABPC1-221ENST00000522720 SYT2Q8N9I0 419 aaPredicted RBP18.12■□□□□ 0.49
PABPC1-221ENST00000522720 CNNM3Q8NE01 707 aa18.12■□□□□ 0.49
PABPC1-221ENST00000522720 SPPL3Q8TCT6 385 aa18.12■□□□□ 0.49
PABPC1-221ENST00000522720 CPB2Q96IY4 423 aa18.12■□□□□ 0.49
PABPC1-221ENST00000522720 IFT74Q96LB3 600 aa18.12■□□□□ 0.49
PABPC1-221ENST00000522720 PRIMPOLQ96LW4 560 aa18.12■□□□□ 0.49
PABPC1-221ENST00000522720 RUSC1Q9BVN2 902 aa18.12■□□□□ 0.49
PABPC1-221ENST00000522720 CSRNP2Q9H175 543 aa18.12■□□□□ 0.49
PABPC1-221ENST00000522720 ALG13Q9NP73 1137 aaKnown RBP18.12■□□□□ 0.49
PABPC1-221ENST00000522720 PRMT7Q9NVM4 692 aaPredicted RBP18.12■□□□□ 0.49
PABPC1-221ENST00000522720 SRPRBQ9Y5M8 271 aaKnown RBP18.12■□□□□ 0.49
PABPC1-221ENST00000522720 A0A1B0GUA9 196 aa18.11■□□□□ 0.49
PABPC1-221ENST00000522720 MEIS3P2A8K0S8 358 aa18.11■□□□□ 0.49
PABPC1-221ENST00000522720 B4GALT5O43286 388 aa18.11■□□□□ 0.49
PABPC1-221ENST00000522720 OFD1O75665 1012 aa18.11■□□□□ 0.49
PABPC1-221ENST00000522720 NCLP19338 710 aaKnown RBP18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms