RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 KIF17Q9P2E2 1029 aa4.6□□□□□ -1.67
SKP1-209ENST00000522552 BACE2Q9Y5Z0 518 aa4.6□□□□□ -1.67
SKP1-209ENST00000522552 C2orf71A6NGG8 1288 aa4.59□□□□□ -1.67
SKP1-209ENST00000522552 KCNK3O14649 394 aa4.59□□□□□ -1.67
SKP1-209ENST00000522552 SLC3A2P08195 630 aaKnown RBP4.59□□□□□ -1.67
SKP1-209ENST00000522552 PLS3P13797 630 aa4.59□□□□□ -1.67
SKP1-209ENST00000522552 ZNF131P52739 623 aa4.59□□□□□ -1.67
SKP1-209ENST00000522552 MANFP55145 182 aaKnown RBP4.59□□□□□ -1.67
SKP1-209ENST00000522552 PCBP4P57723 403 aaKnown RBP4.59□□□□□ -1.67
SKP1-209ENST00000522552 NRG1Q02297 640 aaPredicted RBP4.59□□□□□ -1.67
SKP1-209ENST00000522552 ID3Q02535 119 aa4.59□□□□□ -1.67
SKP1-209ENST00000522552 CREMQ03060 361 aa4.59□□□□□ -1.67
SKP1-209ENST00000522552 KCNAB2Q13303 367 aa4.59□□□□□ -1.67
SKP1-209ENST00000522552 IFI16Q16666 785 aaKnown RBP4.59□□□□□ -1.67
SKP1-209ENST00000522552 UGT8Q16880 541 aa4.59□□□□□ -1.67
SKP1-209ENST00000522552 C3orf36Q3SXR2 165 aa4.59□□□□□ -1.67
SKP1-209ENST00000522552 LIN54Q6MZP7 749 aa4.59□□□□□ -1.67
SKP1-209ENST00000522552 MILR1Q7Z6M3 343 aa4.59□□□□□ -1.67
SKP1-209ENST00000522552 OXR1Q8N573 874 aa4.59□□□□□ -1.67
SKP1-209ENST00000522552 CCDC191Q8NCU4 936 aa4.59□□□□□ -1.67
SKP1-209ENST00000522552 RNF214Q8ND24 703 aa4.59□□□□□ -1.67
SKP1-209ENST00000522552 DNAJB8Q8NHS0 232 aa4.59□□□□□ -1.67
SKP1-209ENST00000522552 MUL1Q969V5 352 aa4.59□□□□□ -1.67
SKP1-209ENST00000522552 DHX36Q9H2U1 1008 aaKnown RBP4.59□□□□□ -1.67
SKP1-209ENST00000522552 GHITMQ9H3K2 345 aa4.59□□□□□ -1.67
SKP1-209ENST00000522552 ARMT1Q9H993 441 aa4.59□□□□□ -1.67
SKP1-209ENST00000522552 ZNF287Q9HBT7 754 aa4.59□□□□□ -1.67
SKP1-209ENST00000522552 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.59□□□□□ -1.67
SKP1-209ENST00000522552 GJB4Q9NTQ9 266 aa4.59□□□□□ -1.67
SKP1-209ENST00000522552 PRR13Q9NZ81 148 aa4.59□□□□□ -1.67
SKP1-209ENST00000522552 CFDP1Q9UEE9 299 aaPredicted RBP4.59□□□□□ -1.67
SKP1-209ENST00000522552 TBC1D29Q9UFV1 150 aa4.59□□□□□ -1.67
SKP1-209ENST00000522552 FEZ2Q9UHY8 353 aaPredicted RBP4.59□□□□□ -1.67
SKP1-209ENST00000522552 OGDHLQ9ULD0 1010 aa4.59□□□□□ -1.67
SKP1-209ENST00000522552 SLC6A14Q9UN76 642 aa4.59□□□□□ -1.67
SKP1-209ENST00000522552 NEURL1BA8MQ27 555 aa4.58□□□□□ -1.68
SKP1-209ENST00000522552 AURKAO14965 403 aa4.58□□□□□ -1.68
SKP1-209ENST00000522552 TMPRSS2O15393 492 aa4.58□□□□□ -1.68
SKP1-209ENST00000522552 ARHGAP6O43182 974 aa4.58□□□□□ -1.68
SKP1-209ENST00000522552 HMMRO75330 724 aa4.58□□□□□ -1.68
SKP1-209ENST00000522552 URI1O94763 535 aaPredicted RBP4.58□□□□□ -1.68
SKP1-209ENST00000522552 DLGAP3O95886 979 aa4.58□□□□□ -1.68
SKP1-209ENST00000522552 AMY2AP04746 511 aa4.58□□□□□ -1.68
SKP1-209ENST00000522552 CD3EP07766 207 aa4.58□□□□□ -1.68
SKP1-209ENST00000522552 TMEM253P0C7T8 217 aa4.58□□□□□ -1.68
SKP1-209ENST00000522552 MTHFD2P13995 350 aa4.58□□□□□ -1.68
SKP1-209ENST00000522552 KRT15P19012 456 aa4.58□□□□□ -1.68
SKP1-209ENST00000522552 AMY2BP19961 511 aa4.58□□□□□ -1.68
SKP1-209ENST00000522552 ACTN2P35609 894 aa4.58□□□□□ -1.68
SKP1-209ENST00000522552 NOP2P46087 812 aaKnown RBP4.58□□□□□ -1.68
SKP1-209ENST00000522552 MAP2K3P46734 347 aa4.58□□□□□ -1.68
SKP1-209ENST00000522552 MAP2K6P52564 334 aa4.58□□□□□ -1.68
SKP1-209ENST00000522552 MRPS9P82933 396 aaKnown RBP4.58□□□□□ -1.68
SKP1-209ENST00000522552 POU4F1Q01851 419 aa4.58□□□□□ -1.68
SKP1-209ENST00000522552 TLE2Q04725 743 aa4.58□□□□□ -1.68
SKP1-209ENST00000522552 CDC16Q13042 620 aa4.58□□□□□ -1.68
SKP1-209ENST00000522552 TRPC3Q13507 836 aa4.58□□□□□ -1.68
SKP1-209ENST00000522552 LRP8Q14114 963 aa4.58□□□□□ -1.68
SKP1-209ENST00000522552 PAN2Q504Q3 1202 aaKnown RBP4.58□□□□□ -1.68
SKP1-209ENST00000522552 FAM182BQ5T319 152 aa4.58□□□□□ -1.68
SKP1-209ENST00000522552 SLC30A6Q6NXT4 461 aa4.58□□□□□ -1.68
SKP1-209ENST00000522552 HHIPL2Q6UWX4 724 aa4.58□□□□□ -1.68
SKP1-209ENST00000522552 C1orf229Q6ZS94 237 aaPredicted RBP4.58□□□□□ -1.68
SKP1-209ENST00000522552 CDC37L1Q7L3B6 337 aa4.58□□□□□ -1.68
SKP1-209ENST00000522552 RTL10Q7L3V2 364 aa4.58□□□□□ -1.68
SKP1-209ENST00000522552 SYT9Q86SS6 491 aa4.58□□□□□ -1.68
SKP1-209ENST00000522552 SESTD1Q86VW0 696 aa4.58□□□□□ -1.68
SKP1-209ENST00000522552 VSIG1Q86XK7 387 aa4.58□□□□□ -1.68
SKP1-209ENST00000522552 ZZZ3Q8IYH5 903 aa4.58□□□□□ -1.68
SKP1-209ENST00000522552 IL31RAQ8NI17 732 aa4.58□□□□□ -1.68
SKP1-209ENST00000522552 RFFLQ8WZ73 363 aa4.58□□□□□ -1.68
SKP1-209ENST00000522552 WNT8BQ93098 351 aa4.58□□□□□ -1.68
SKP1-209ENST00000522552 SLF1Q9BQI6 1058 aa4.58□□□□□ -1.68
SKP1-209ENST00000522552 HEPHQ9BQS7 1158 aa4.58□□□□□ -1.68
SKP1-209ENST00000522552 AGXT2Q9BYV1 514 aa4.58□□□□□ -1.68
SKP1-209ENST00000522552 SEMA4AQ9H3S1 761 aa4.58□□□□□ -1.68
SKP1-209ENST00000522552 PREBQ9HCU5 417 aa4.58□□□□□ -1.68
SKP1-209ENST00000522552 CLEC1BQ9P126 229 aa4.58□□□□□ -1.68
SKP1-209ENST00000522552 ORC3Q9UBD5 711 aaPredicted RBP4.58□□□□□ -1.68
SKP1-209ENST00000522552 STAP2Q9UGK3 403 aa4.58□□□□□ -1.68
SKP1-209ENST00000522552 GGA1Q9UJY5 639 aa4.58□□□□□ -1.68
SKP1-209ENST00000522552 DENND2AQ9ULE3 1009 aa4.58□□□□□ -1.68
SKP1-209ENST00000522552 SLC39A10Q9ULF5 831 aa4.58□□□□□ -1.68
SKP1-209ENST00000522552 PCDHA2Q9Y5H9 948 aa4.58□□□□□ -1.68
SKP1-209ENST00000522552 LOC100289279A0A1B0GTE1 492 aa4.57□□□□□ -1.68
SKP1-209ENST00000522552 AQP12BA6NM10 295 aa4.57□□□□□ -1.68
SKP1-209ENST00000522552 H7C0S8 307 aa4.57□□□□□ -1.68
SKP1-209ENST00000522552 LINC01387J3KSC0 135 aa4.57□□□□□ -1.68
SKP1-209ENST00000522552 DAPK3O43293 454 aa4.57□□□□□ -1.68
SKP1-209ENST00000522552 MAFO75444 373 aaPredicted RBP4.57□□□□□ -1.68
SKP1-209ENST00000522552 STARD3NLO95772 234 aa4.57□□□□□ -1.68
SKP1-209ENST00000522552 FTLP02792 175 aaPredicted RBP4.57□□□□□ -1.68
SKP1-209ENST00000522552 APOA4P06727 396 aa4.57□□□□□ -1.68
SKP1-209ENST00000522552 LPLP06858 475 aa4.57□□□□□ -1.68
SKP1-209ENST00000522552 BCRP11274 1271 aa4.57□□□□□ -1.68
SKP1-209ENST00000522552 ALOX12P18054 663 aa4.57□□□□□ -1.68
SKP1-209ENST00000522552 USP11P51784 963 aa4.57□□□□□ -1.68
SKP1-209ENST00000522552 FMO1Q01740 532 aa4.57□□□□□ -1.68
SKP1-209ENST00000522552 DUSP4Q13115 394 aa4.57□□□□□ -1.68
SKP1-209ENST00000522552 MAPK7Q13164 816 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms