RNA–Protein interactions for RNA: ENST00000522165.5

COL13A1-214, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-214ENST00000522165 RNF10Q8N5U6 811 aaKnown RBP28.17■■■□□ 2.1
COL13A1-214ENST00000522165 STK33Q9BYT3 514 aa28.17■■■□□ 2.1
COL13A1-214ENST00000522165 DAAM1Q9Y4D1 1078 aa28.17■■■□□ 2.1
COL13A1-214ENST00000522165 EMSYQ7Z589 1322 aa28.17■■■□□ 2.1
COL13A1-214ENST00000522165 IGKV6D-21A0A0A0MT36 114 aa28.17■■■□□ 2.1
COL13A1-214ENST00000522165 CTAGE15A4D2H0 777 aa28.17■■■□□ 2.1
COL13A1-214ENST00000522165 CTAGE8P0CG41 777 aa28.17■■■□□ 2.1
COL13A1-214ENST00000522165 ZSCAN20P17040 1043 aaPredicted RBP28.17■■■□□ 2.1
COL13A1-214ENST00000522165 ANXA13P27216 316 aa28.17■■■□□ 2.1
COL13A1-214ENST00000522165 STAT1P42224 750 aa28.17■■■□□ 2.1
COL13A1-214ENST00000522165 MCCD1P59942 119 aaPredicted RBP28.17■■■□□ 2.1
COL13A1-214ENST00000522165 TUBB4BP68371 445 aa28.17■■■□□ 2.1
COL13A1-214ENST00000522165 EAPPQ56P03 285 aaPredicted RBP28.17■■■□□ 2.1
COL13A1-214ENST00000522165 C1orf220Q5T0J3 134 aa28.17■■■□□ 2.1
COL13A1-214ENST00000522165 CTAGE6Q86UF2 777 aa28.17■■■□□ 2.1
COL13A1-214ENST00000522165 CTAGE4Q8IX94 777 aa28.17■■■□□ 2.1
COL13A1-214ENST00000522165 ALS2CR12Q96Q35 445 aa28.17■■■□□ 2.1
COL13A1-214ENST00000522165 TAF1DQ9H5J8 278 aaPredicted RBP28.17■■■□□ 2.1
COL13A1-214ENST00000522165 DNAJC12Q9UKB3 198 aa28.17■■■□□ 2.1
COL13A1-214ENST00000522165 ADGRA3Q8IWK6 1321 aa28.16■■■□□ 2.1
COL13A1-214ENST00000522165 FARP2O94887 1054 aaPredicted RBP28.16■■■□□ 2.1
COL13A1-214ENST00000522165 OATP04181 439 aa28.16■■■□□ 2.1
COL13A1-214ENST00000522165 CNGA1P29973 690 aa28.16■■■□□ 2.1
COL13A1-214ENST00000522165 COPB2P35606 906 aa28.16■■■□□ 2.1
COL13A1-214ENST00000522165 GPAT2Q6NUI2 795 aa28.16■■■□□ 2.1
COL13A1-214ENST00000522165 LMO3Q8TAP4 145 aa28.16■■■□□ 2.1
COL13A1-214ENST00000522165 APEX2Q9UBZ4 518 aa28.16■■■□□ 2.1
COL13A1-214ENST00000522165 P4HA2O15460 535 aa28.15■■■□□ 2.1
COL13A1-214ENST00000522165 N4BP1O75113 896 aaKnown RBP28.15■■■□□ 2.1
COL13A1-214ENST00000522165 FERP16591 822 aa28.15■■■□□ 2.1
COL13A1-214ENST00000522165 OSBPP22059 807 aa28.15■■■□□ 2.1
COL13A1-214ENST00000522165 CLCN6P51797 869 aa28.15■■■□□ 2.1
COL13A1-214ENST00000522165 PPP3CAQ08209 521 aa28.15■■■□□ 2.1
COL13A1-214ENST00000522165 Q3C1V9 767 aa28.15■■■□□ 2.1
COL13A1-214ENST00000522165 PLEKHO2Q8TD55 490 aa28.15■■■□□ 2.1
COL13A1-214ENST00000522165 UBE2Q2Q8WVN8 375 aa28.15■■■□□ 2.1
COL13A1-214ENST00000522165 POLR3FQ9H1D9 316 aaPredicted RBP28.15■■■□□ 2.1
COL13A1-214ENST00000522165 LRRC37A2A6NM11 1700 aa28.15■■■□□ 2.1
COL13A1-214ENST00000522165 F8VZ95 297 aa28.15■■■□□ 2.1
COL13A1-214ENST00000522165 NEDD9Q14511 834 aa28.15■■■□□ 2.1
COL13A1-214ENST00000522165 C10orf76Q5T2E6 689 aa28.15■■■□□ 2.1
COL13A1-214ENST00000522165 LDLRAD1Q5T700 205 aa28.15■■■□□ 2.1
COL13A1-214ENST00000522165 IFT74Q96LB3 600 aa28.15■■■□□ 2.1
COL13A1-214ENST00000522165 NOX5Q96PH1 765 aa28.15■■■□□ 2.1
COL13A1-214ENST00000522165 ARGLU1Q9NWB6 273 aaPredicted RBP28.15■■■□□ 2.1
COL13A1-214ENST00000522165 GSTTP1A0A1W2PQM5 241 aa28.14■■■□□ 2.1
COL13A1-214ENST00000522165 SRGAP2O75044 1071 aa28.14■■■□□ 2.1
COL13A1-214ENST00000522165 ADRB2P07550 413 aa28.14■■■□□ 2.1
COL13A1-214ENST00000522165 TGFB3P10600 412 aa28.14■■■□□ 2.1
COL13A1-214ENST00000522165 SOX5P35711 763 aa28.14■■■□□ 2.1
COL13A1-214ENST00000522165 EMC2Q15006 297 aa28.14■■■□□ 2.1
COL13A1-214ENST00000522165 NAB2Q15742 525 aa28.14■■■□□ 2.1
COL13A1-214ENST00000522165 ARID3AQ99856 593 aa28.14■■■□□ 2.1
COL13A1-214ENST00000522165 GOLGA8IPA6NC78 632 aa28.14■■■□□ 2.09
COL13A1-214ENST00000522165 GOLGA8JA6NMD2 632 aa28.14■■■□□ 2.09
COL13A1-214ENST00000522165 PNMA6AP0CW24 399 aaPredicted RBP28.14■■■□□ 2.09
COL13A1-214ENST00000522165 GJA5P36382 358 aa28.14■■■□□ 2.09
COL13A1-214ENST00000522165 DRAP1Q14919 205 aaPredicted RBP28.14■■■□□ 2.09
COL13A1-214ENST00000522165 SLC39A4Q6P5W5 647 aa28.14■■■□□ 2.09
COL13A1-214ENST00000522165 FGD4Q96M96 766 aa28.14■■■□□ 2.09
COL13A1-214ENST00000522165 ARHGAP28Q9P2N2 729 aa28.14■■■□□ 2.09
COL13A1-214ENST00000522165 ZC3H4Q9UPT8 1303 aaKnown RBP28.13■■■□□ 2.09
COL13A1-214ENST00000522165 GFPT2O94808 682 aa28.13■■■□□ 2.09
COL13A1-214ENST00000522165 POLGP54098 1239 aaPredicted RBP28.13■■■□□ 2.09
COL13A1-214ENST00000522165 CETN1Q12798 172 aa28.13■■■□□ 2.09
COL13A1-214ENST00000522165 SNRNP35Q16560 246 aaKnown RBP28.13■■■□□ 2.09
COL13A1-214ENST00000522165 KIAA0753Q2KHM9 967 aa28.13■■■□□ 2.09
COL13A1-214ENST00000522165 CBWD2Q8IUF1 395 aa28.13■■■□□ 2.09
COL13A1-214ENST00000522165 PCYT2Q99447 389 aa28.13■■■□□ 2.09
COL13A1-214ENST00000522165 PACSIN1Q9BY11 444 aa28.13■■■□□ 2.09
COL13A1-214ENST00000522165 NIFKQ9BYG3 293 aaKnown RBP28.13■■■□□ 2.09
COL13A1-214ENST00000522165 GPR88Q9GZN0 384 aa28.13■■■□□ 2.09
COL13A1-214ENST00000522165 NENFQ9UMX5 172 aa28.13■■■□□ 2.09
COL13A1-214ENST00000522165 MYH10P35580 1976 aa28.12■■■□□ 2.09
COL13A1-214ENST00000522165 PGK2P07205 417 aa28.12■■■□□ 2.09
COL13A1-214ENST00000522165 RFX1P22670 979 aa28.12■■■□□ 2.09
COL13A1-214ENST00000522165 GCLMP48507 274 aa28.12■■■□□ 2.09
COL13A1-214ENST00000522165 PHLDB3Q6NSJ2 640 aa28.12■■■□□ 2.09
COL13A1-214ENST00000522165 PARD6BQ9BYG5 372 aa28.12■■■□□ 2.09
COL13A1-214ENST00000522165 DHX33Q9H6R0 707 aaKnown RBP28.12■■■□□ 2.09
COL13A1-214ENST00000522165 NAGPAQ9UK23 515 aa28.12■■■□□ 2.09
COL13A1-214ENST00000522165 SNX12Q9UMY4 172 aa28.12■■■□□ 2.09
COL13A1-214ENST00000522165 SCN4AP35499 1836 aa28.12■■■□□ 2.09
COL13A1-214ENST00000522165 H0YCG3 227 aa28.12■■■□□ 2.09
COL13A1-214ENST00000522165 SOCS7O14512 581 aa28.12■■■□□ 2.09
COL13A1-214ENST00000522165 PMM2O15305 246 aa28.12■■■□□ 2.09
COL13A1-214ENST00000522165 BUB1O43683 1085 aa28.12■■■□□ 2.09
COL13A1-214ENST00000522165 EVI5O60447 810 aa28.12■■■□□ 2.09
COL13A1-214ENST00000522165 KLRC1P26715 233 aa28.12■■■□□ 2.09
COL13A1-214ENST00000522165 EPC2Q52LR7 807 aa28.12■■■□□ 2.09
COL13A1-214ENST00000522165 TAS1R3Q7RTX0 852 aa28.12■■■□□ 2.09
COL13A1-214ENST00000522165 MPHOSPH6Q99547 160 aaKnown RBP28.12■■■□□ 2.09
COL13A1-214ENST00000522165 ZNF446Q9NWS9 450 aa28.12■■■□□ 2.09
COL13A1-214ENST00000522165 SRCAPQ6ZRS2 3230 aa28.12■■■□□ 2.09
COL13A1-214ENST00000522165 IQCA1LA6NCM1 817 aa28.11■■■□□ 2.09
COL13A1-214ENST00000522165 BRDTQ58F21 947 aaPredicted RBP28.11■■■□□ 2.09
COL13A1-214ENST00000522165 EEPD1Q7L9B9 569 aa28.11■■■□□ 2.09
COL13A1-214ENST00000522165 VPS36Q86VN1 386 aa28.11■■■□□ 2.09
COL13A1-214ENST00000522165 SAAL1Q96ER3 474 aa28.11■■■□□ 2.09
COL13A1-214ENST00000522165 FBXL18Q96ME1 805 aa28.11■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms