RNA–Protein interactions for RNA: ENST00000509277.5

LIMCH1-209, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2 BASIC

Gene LIMCH1, Length 3,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-209ENST00000509277 RNASE9P60153 205 aaKnown RBP9.47□□□□□ -0.89
LIMCH1-209ENST00000509277 ORC2Q13416 577 aaPredicted RBP9.47□□□□□ -0.89
LIMCH1-209ENST00000509277 BRDTQ58F21 947 aaPredicted RBP9.47□□□□□ -0.89
LIMCH1-209ENST00000509277 FAM26FQ5R3K3 315 aa9.47□□□□□ -0.89
LIMCH1-209ENST00000509277 SLC7A3Q8WY07 619 aa9.47□□□□□ -0.89
LIMCH1-209ENST00000509277 TCHPQ9BT92 498 aa9.47□□□□□ -0.89
LIMCH1-209ENST00000509277 FGFBP2Q9BYJ0 223 aa9.47□□□□□ -0.89
LIMCH1-209ENST00000509277 GOLGA6AQ9NYA3 693 aa9.47□□□□□ -0.89
LIMCH1-209ENST00000509277 NOD1Q9Y239 953 aa9.47□□□□□ -0.89
LIMCH1-209ENST00000509277 PTCH2Q9Y6C5 1203 aa9.47□□□□□ -0.89
LIMCH1-209ENST00000509277 CEP290O15078 2479 aa9.47□□□□□ -0.89
LIMCH1-209ENST00000509277 GSTTP1A0A1W2PQM5 241 aa9.46□□□□□ -0.89
LIMCH1-209ENST00000509277 UPP2O95045 317 aa9.46□□□□□ -0.89
LIMCH1-209ENST00000509277 SFNP31947 248 aa9.46□□□□□ -0.89
LIMCH1-209ENST00000509277 PRCPP42785 496 aa9.46□□□□□ -0.89
LIMCH1-209ENST00000509277 COASYQ13057 564 aa9.46□□□□□ -0.89
LIMCH1-209ENST00000509277 ZNF746Q6NUN9 644 aaPredicted RBP9.46□□□□□ -0.89
LIMCH1-209ENST00000509277 RINT1Q6NUQ1 792 aa9.46□□□□□ -0.89
LIMCH1-209ENST00000509277 XRRA1Q6P2D8 792 aa9.46□□□□□ -0.89
LIMCH1-209ENST00000509277 NELFBQ8WX92 580 aa9.46□□□□□ -0.89
LIMCH1-209ENST00000509277 KAT2BQ92831 832 aa9.46□□□□□ -0.89
LIMCH1-209ENST00000509277 MBOAT7Q96N66 472 aa9.46□□□□□ -0.89
LIMCH1-209ENST00000509277 HSD17B14Q9BPX1 270 aa9.46□□□□□ -0.89
LIMCH1-209ENST00000509277 PCIF1Q9H4Z3 704 aa9.46□□□□□ -0.89
LIMCH1-209ENST00000509277 SETD4Q9NVD3 440 aa9.46□□□□□ -0.89
LIMCH1-209ENST00000509277 IRAK4Q9NWZ3 460 aa9.46□□□□□ -0.89
LIMCH1-209ENST00000509277 FAM184BQ9ULE4 1060 aa9.46□□□□□ -0.89
LIMCH1-209ENST00000509277 EYA4O95677 639 aa9.46□□□□□ -0.9
LIMCH1-209ENST00000509277 CHRM1P11229 460 aaPredicted RBP9.46□□□□□ -0.9
LIMCH1-209ENST00000509277 ATN1P54259 1190 aaPredicted RBP9.46□□□□□ -0.9
LIMCH1-209ENST00000509277 DPYDQ12882 1025 aa9.46□□□□□ -0.9
LIMCH1-209ENST00000509277 PDCLQ13371 301 aa9.46□□□□□ -0.9
LIMCH1-209ENST00000509277 TCERG1LQ5VWI1 586 aa9.46□□□□□ -0.9
LIMCH1-209ENST00000509277 ANO5Q75V66 913 aa9.46□□□□□ -0.9
LIMCH1-209ENST00000509277 RHPN2Q8IUC4 686 aa9.46□□□□□ -0.9
LIMCH1-209ENST00000509277 EFCAB13Q8IY85 973 aa9.46□□□□□ -0.9
LIMCH1-209ENST00000509277 FAM76AQ8TAV0 307 aa9.46□□□□□ -0.9
LIMCH1-209ENST00000509277 MICAL1Q8TDZ2 1067 aa9.46□□□□□ -0.9
LIMCH1-209ENST00000509277 CCDC114Q96M63 670 aa9.46□□□□□ -0.9
LIMCH1-209ENST00000509277 RNPEPQ9H4A4 650 aa9.46□□□□□ -0.9
LIMCH1-209ENST00000509277 NRBP2Q9NSY0 501 aa9.46□□□□□ -0.9
LIMCH1-209ENST00000509277 TFR2Q9UP52 801 aa9.46□□□□□ -0.9
LIMCH1-209ENST00000509277 NFE2L3Q9Y4A8 694 aa9.46□□□□□ -0.9
LIMCH1-209ENST00000509277 MYH15Q9Y2K3 1946 aa9.46□□□□□ -0.9
LIMCH1-209ENST00000509277 A0A087WUV0 522 aaPredicted RBP9.46□□□□□ -0.9
LIMCH1-209ENST00000509277 GOLGA6L7A0A1B0GV03 622 aa9.46□□□□□ -0.9
LIMCH1-209ENST00000509277 MAFGO15525 162 aa9.46□□□□□ -0.9
LIMCH1-209ENST00000509277 LGR5O75473 907 aa9.46□□□□□ -0.9
LIMCH1-209ENST00000509277 RARBP10826 455 aa9.46□□□□□ -0.9
LIMCH1-209ENST00000509277 CD44P16070 742 aaKnown RBP9.46□□□□□ -0.9
LIMCH1-209ENST00000509277 LBX1P52954 281 aa9.46□□□□□ -0.9
LIMCH1-209ENST00000509277 CORO7P57737 925 aa9.46□□□□□ -0.9
LIMCH1-209ENST00000509277 MAP2K1Q02750 393 aaPredicted RBP9.46□□□□□ -0.9
LIMCH1-209ENST00000509277 CACNB2Q08289 660 aaPredicted RBP9.46□□□□□ -0.9
LIMCH1-209ENST00000509277 SLC9C1Q4G0N8 1177 aa9.46□□□□□ -0.9
LIMCH1-209ENST00000509277 TAPT1Q6NXT6 567 aa9.46□□□□□ -0.9
LIMCH1-209ENST00000509277 TUFT1Q9NNX1 390 aa9.46□□□□□ -0.9
LIMCH1-209ENST00000509277 VTA1Q9NP79 307 aa9.46□□□□□ -0.9
LIMCH1-209ENST00000509277 RMND1Q9NWS8 449 aa9.46□□□□□ -0.9
LIMCH1-209ENST00000509277 CPSF2Q9P2I0 782 aaKnown RBP9.46□□□□□ -0.9
LIMCH1-209ENST00000509277 H3BRB1 525 aa9.45□□□□□ -0.9
LIMCH1-209ENST00000509277 LGALS2P05162 132 aa9.45□□□□□ -0.9
LIMCH1-209ENST00000509277 CTSHP09668 335 aa9.45□□□□□ -0.9
LIMCH1-209ENST00000509277 MYBP10242 640 aa9.45□□□□□ -0.9
LIMCH1-209ENST00000509277 BMP6P22004 513 aa9.45□□□□□ -0.9
LIMCH1-209ENST00000509277 RARRES1P49788 294 aa9.45□□□□□ -0.9
LIMCH1-209ENST00000509277 CYP2J2P51589 502 aa9.45□□□□□ -0.9
LIMCH1-209ENST00000509277 KCNA1Q09470 495 aa9.45□□□□□ -0.9
LIMCH1-209ENST00000509277 KIAA0753Q2KHM9 967 aa9.45□□□□□ -0.9
LIMCH1-209ENST00000509277 ODF2Q5BJF6 829 aa9.45□□□□□ -0.9
LIMCH1-209ENST00000509277 MORN1Q5T089 497 aa9.45□□□□□ -0.9
LIMCH1-209ENST00000509277 HHIPL1Q96JK4 782 aa9.45□□□□□ -0.9
LIMCH1-209ENST00000509277 GPR20Q99678 358 aa9.45□□□□□ -0.9
LIMCH1-209ENST00000509277 RNF208Q9H0X6 261 aa9.45□□□□□ -0.9
LIMCH1-209ENST00000509277 TUT1Q9H6E5 874 aaKnown RBP9.45□□□□□ -0.9
LIMCH1-209ENST00000509277 L2HGDHQ9H9P8 463 aa9.45□□□□□ -0.9
LIMCH1-209ENST00000509277 SAMSN1Q9NSI8 373 aaKnown RBP9.45□□□□□ -0.9
LIMCH1-209ENST00000509277 SRRDQ9UH36 339 aa9.45□□□□□ -0.9
LIMCH1-209ENST00000509277 BAIAP2L1Q9UHR4 511 aa9.45□□□□□ -0.9
LIMCH1-209ENST00000509277 MYADML2A6NDP7 307 aa9.45□□□□□ -0.9
LIMCH1-209ENST00000509277 PSMA7O14818 248 aa9.45□□□□□ -0.9
LIMCH1-209ENST00000509277 STAM2O75886 525 aa9.45□□□□□ -0.9
LIMCH1-209ENST00000509277 VTNP04004 478 aa9.45□□□□□ -0.9
LIMCH1-209ENST00000509277 OATP04181 439 aa9.45□□□□□ -0.9
LIMCH1-209ENST00000509277 IFT88Q13099 833 aa9.45□□□□□ -0.9
LIMCH1-209ENST00000509277 DRP2Q13474 957 aa9.45□□□□□ -0.9
LIMCH1-209ENST00000509277 LAMC2Q13753 1193 aa9.45□□□□□ -0.9
LIMCH1-209ENST00000509277 NIPA1Q7RTP0 329 aa9.45□□□□□ -0.9
LIMCH1-209ENST00000509277 SAMD3Q8N6K7 520 aa9.45□□□□□ -0.9
LIMCH1-209ENST00000509277 ACRBPQ8NEB7 543 aa9.45□□□□□ -0.9
LIMCH1-209ENST00000509277 POLR3CQ9BUI4 534 aaPredicted RBP9.45□□□□□ -0.9
LIMCH1-209ENST00000509277 XPNPEP3Q9NQH7 507 aa9.45□□□□□ -0.9
LIMCH1-209ENST00000509277 KBTBD4Q9NVX7 518 aa9.45□□□□□ -0.9
LIMCH1-209ENST00000509277 GJD2Q9UKL4 321 aa9.45□□□□□ -0.9
LIMCH1-209ENST00000509277 SYNRGQ9UMZ2 1314 aa9.44□□□□□ -0.9
LIMCH1-209ENST00000509277 INO80B-WBP1J3KQ70 363 aa9.44□□□□□ -0.9
LIMCH1-209ENST00000509277 INHAP05111 366 aa9.44□□□□□ -0.9
LIMCH1-209ENST00000509277 INSRRP14616 1297 aa9.44□□□□□ -0.9
LIMCH1-209ENST00000509277 GRK4P32298 578 aa9.44□□□□□ -0.9
LIMCH1-209ENST00000509277 CASP5P51878 434 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms