RNA–Protein interactions for RNA: ENST00000508071.1

CLDND1-217, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 556 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-217ENST00000508071 SFXN1Q9H9B4 322 aa20.23■□□□□ 0.83
CLDND1-217ENST00000508071 RAB27AP51159 221 aa20.22■□□□□ 0.83
CLDND1-217ENST00000508071 USP11P51784 963 aa20.22■□□□□ 0.83
CLDND1-217ENST00000508071 XKR3Q5GH77 459 aa20.22■□□□□ 0.83
CLDND1-217ENST00000508071 Q6ZUG5 572 aa20.22■□□□□ 0.83
CLDND1-217ENST00000508071 CCDC149Q6ZUS6 474 aa20.22■□□□□ 0.83
CLDND1-217ENST00000508071 OTOP3Q7RTS5 596 aa20.22■□□□□ 0.83
CLDND1-217ENST00000508071 MIER3Q7Z3K6 550 aa20.22■□□□□ 0.83
CLDND1-217ENST00000508071 FRMD5Q7Z6J6 570 aa20.22■□□□□ 0.83
CLDND1-217ENST00000508071 RDM1Q8NG50 284 aa20.22■□□□□ 0.83
CLDND1-217ENST00000508071 BCL7CQ8WUZ0 217 aaPredicted RBP20.22■□□□□ 0.83
CLDND1-217ENST00000508071 PHKBQ93100 1093 aa20.22■□□□□ 0.83
CLDND1-217ENST00000508071 EMILIN2Q9BXX0 1053 aa20.22■□□□□ 0.83
CLDND1-217ENST00000508071 FAM105AQ9NUU6 356 aa20.22■□□□□ 0.83
CLDND1-217ENST00000508071 STK39Q9UEW8 545 aa20.22■□□□□ 0.83
CLDND1-217ENST00000508071 GVINP1Q7Z2Y8 2422 aa20.22■□□□□ 0.83
CLDND1-217ENST00000508071 PTPN14Q15678 1187 aa20.21■□□□□ 0.83
CLDND1-217ENST00000508071 CATSPER4Q7RTX7 472 aa20.21■□□□□ 0.83
CLDND1-217ENST00000508071 GPR149Q86SP6 731 aa20.21■□□□□ 0.83
CLDND1-217ENST00000508071 ZNF410Q86VK4 478 aa20.21■□□□□ 0.83
CLDND1-217ENST00000508071 RHPN2Q8IUC4 686 aa20.21■□□□□ 0.83
CLDND1-217ENST00000508071 BRF1Q92994 677 aa20.21■□□□□ 0.83
CLDND1-217ENST00000508071 GJA10Q969M2 543 aa20.21■□□□□ 0.83
CLDND1-217ENST00000508071 PGBD4Q96DM1 585 aa20.21■□□□□ 0.83
CLDND1-217ENST00000508071 SUCLA2Q9P2R7 463 aaPredicted RBP20.21■□□□□ 0.83
CLDND1-217ENST00000508071 IGKV6-21A0A0C4DH24 114 aa20.2■□□□□ 0.82
CLDND1-217ENST00000508071 TMEM150BA6NC51 233 aa20.2■□□□□ 0.82
CLDND1-217ENST00000508071 ZNF623O75123 536 aa20.2■□□□□ 0.82
CLDND1-217ENST00000508071 OFD1O75665 1012 aa20.2■□□□□ 0.82
CLDND1-217ENST00000508071 CPA1P15085 419 aa20.2■□□□□ 0.82
CLDND1-217ENST00000508071 KLRC2P26717 231 aa20.2■□□□□ 0.82
CLDND1-217ENST00000508071 SLC11A1P49279 550 aa20.2■□□□□ 0.82
CLDND1-217ENST00000508071 TDGQ13569 410 aa20.2■□□□□ 0.82
CLDND1-217ENST00000508071 BMP2KLQ5H9B9 411 aa20.2■□□□□ 0.82
CLDND1-217ENST00000508071 URGCPQ8TCY9 931 aa20.2■□□□□ 0.82
CLDND1-217ENST00000508071 CEP89Q96ST8 783 aa20.2■□□□□ 0.82
CLDND1-217ENST00000508071 SH2D3AQ9BRG2 576 aa20.2■□□□□ 0.82
CLDND1-217ENST00000508071 SLC26A6Q9BXS9 759 aa20.2■□□□□ 0.82
CLDND1-217ENST00000508071 VPS54Q9P1Q0 977 aa20.2■□□□□ 0.82
CLDND1-217ENST00000508071 DNAJB4Q9UDY4 337 aa20.2■□□□□ 0.82
CLDND1-217ENST00000508071 FBXL21Q9UKT6 434 aa20.2■□□□□ 0.82
CLDND1-217ENST00000508071 C2orf16Q68DN1 1984 aa20.2■□□□□ 0.82
CLDND1-217ENST00000508071 NID2Q14112 1375 aa20.2■□□□□ 0.82
CLDND1-217ENST00000508071 MEIS3P2A8K0S8 358 aa20.19■□□□□ 0.82
CLDND1-217ENST00000508071 EDIL3O43854 480 aa20.19■□□□□ 0.82
CLDND1-217ENST00000508071 PSMD10O75832 226 aa20.19■□□□□ 0.82
CLDND1-217ENST00000508071 CWF19L1Q69YN2 538 aaKnown RBP20.19■□□□□ 0.82
CLDND1-217ENST00000508071 NLRP4Q96MN2 994 aa20.19■□□□□ 0.82
CLDND1-217ENST00000508071 KLHL5Q96PQ7 755 aa20.19■□□□□ 0.82
CLDND1-217ENST00000508071 FAM193BQ96PV7 902 aaPredicted RBP20.19■□□□□ 0.82
CLDND1-217ENST00000508071 VN1R3Q9BXE9 311 aa20.19■□□□□ 0.82
CLDND1-217ENST00000508071 RNF26Q9BY78 433 aaPredicted RBP20.19■□□□□ 0.82
CLDND1-217ENST00000508071 DDX11L8A8MPP1 907 aa20.18■□□□□ 0.82
CLDND1-217ENST00000508071 SSBP05455 408 aaKnown RBP eCLIP20.18■□□□□ 0.82
CLDND1-217ENST00000508071 AOC1P19801 751 aa20.18■□□□□ 0.82
CLDND1-217ENST00000508071 CLCN4P51793 760 aa20.18■□□□□ 0.82
CLDND1-217ENST00000508071 Q4G0T1 1027 aa20.18■□□□□ 0.82
CLDND1-217ENST00000508071 ZNF280BQ86YH2 543 aa20.18■□□□□ 0.82
CLDND1-217ENST00000508071 FEZF2Q8TBJ5 459 aa20.18■□□□□ 0.82
CLDND1-217ENST00000508071 TBCKQ8TEA7 893 aa20.18■□□□□ 0.82
CLDND1-217ENST00000508071 JAKMIP1Q96N16 626 aaKnown RBP20.18■□□□□ 0.82
CLDND1-217ENST00000508071 JPH2Q9BR39 696 aaPredicted RBP20.18■□□□□ 0.82
CLDND1-217ENST00000508071 C22orf23Q9BZE7 217 aa20.18■□□□□ 0.82
CLDND1-217ENST00000508071 KCNK12Q9HB15 430 aa20.18■□□□□ 0.82
CLDND1-217ENST00000508071 MRPL17Q9NRX2 175 aaKnown RBP20.18■□□□□ 0.82
CLDND1-217ENST00000508071 DUSP12Q9UNI6 340 aa20.18■□□□□ 0.82
CLDND1-217ENST00000508071 PCDHB2Q9Y5E7 798 aa20.18■□□□□ 0.82
CLDND1-217ENST00000508071 ZNF292O60281 2723 aa20.18■□□□□ 0.82
CLDND1-217ENST00000508071 MAFO75444 373 aaPredicted RBP20.17■□□□□ 0.82
CLDND1-217ENST00000508071 STBD1O95210 358 aa20.17■□□□□ 0.82
CLDND1-217ENST00000508071 CNPP09543 421 aaKnown RBP20.17■□□□□ 0.82
CLDND1-217ENST00000508071 NLRP5P59047 1200 aa20.17■□□□□ 0.82
CLDND1-217ENST00000508071 LETM2Q2VYF4 491 aa20.17■□□□□ 0.82
CLDND1-217ENST00000508071 KSR1Q8IVT5 923 aa20.17■□□□□ 0.82
CLDND1-217ENST00000508071 CCDC105Q8IYK2 499 aa20.17■□□□□ 0.82
CLDND1-217ENST00000508071 ADSSL1Q8N142 457 aa20.17■□□□□ 0.82
CLDND1-217ENST00000508071 RTP3Q9BQQ7 232 aa20.17■□□□□ 0.82
CLDND1-217ENST00000508071 SH3GLB2Q9NR46 395 aa20.17■□□□□ 0.82
CLDND1-217ENST00000508071 PI15O43692 258 aa20.16■□□□□ 0.82
CLDND1-217ENST00000508071 B4GALT3O60512 393 aa20.16■□□□□ 0.82
CLDND1-217ENST00000508071 ALDH2P05091 517 aa20.16■□□□□ 0.82
CLDND1-217ENST00000508071 NPR3P17342 541 aa20.16■□□□□ 0.82
CLDND1-217ENST00000508071 NTRK3Q16288 839 aa20.16■□□□□ 0.82
CLDND1-217ENST00000508071 BLOC1S2Q6QNY1 142 aa20.16■□□□□ 0.82
CLDND1-217ENST00000508071 AGMOQ6ZNB7 445 aa20.16■□□□□ 0.82
CLDND1-217ENST00000508071 C15orf39Q6ZRI6 1047 aa20.16■□□□□ 0.82
CLDND1-217ENST00000508071 SIX5Q8N196 739 aa20.16■□□□□ 0.82
CLDND1-217ENST00000508071 TMEM175Q9BSA9 504 aa20.16■□□□□ 0.82
CLDND1-217ENST00000508071 RSAD1Q9HA92 442 aa20.16■□□□□ 0.82
CLDND1-217ENST00000508071 AGPAT5Q9NUQ2 364 aa20.16■□□□□ 0.82
CLDND1-217ENST00000508071 IGSF9Q9P2J2 1179 aa20.16■□□□□ 0.82
CLDND1-217ENST00000508071 KANSL3Q9P2N6 904 aa20.16■□□□□ 0.82
CLDND1-217ENST00000508071 FAN1Q9Y2M0 1017 aa20.16■□□□□ 0.82
CLDND1-217ENST00000508071 DDHD2O94830 711 aa20.15■□□□□ 0.82
CLDND1-217ENST00000508071 IFNAR1P17181 557 aa20.15■□□□□ 0.82
CLDND1-217ENST00000508071 PSMC5P62195 406 aa20.15■□□□□ 0.82
CLDND1-217ENST00000508071 ANGPT1Q15389 498 aa20.15■□□□□ 0.82
CLDND1-217ENST00000508071 ELMSAN1Q6PJG2 1045 aa20.15■□□□□ 0.82
CLDND1-217ENST00000508071 B3GNT9Q6UX72 402 aa20.15■□□□□ 0.82
CLDND1-217ENST00000508071 DTWD2Q8NBA8 298 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms