RNA–Protein interactions for RNA: ENST00000507326.2

HMGB3P15-201, Transcript of high mobility group box 3 pseudogene 15, humanhuman

BASIC

Gene HMGB3P15, Length 574 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P15-201ENST00000507326 POLG2Q9UHN1 485 aa4.32□□□□□ -1.72
HMGB3P15-201ENST00000507326 INTUQ9ULD6 942 aa4.32□□□□□ -1.72
HMGB3P15-201ENST00000507326 ASAP1Q9ULH1 1129 aa4.32□□□□□ -1.72
HMGB3P15-201ENST00000507326 A0A087X1B8 175 aa4.31□□□□□ -1.72
HMGB3P15-201ENST00000507326 TRBV23-1A0A0A0MS06 115 aa4.31□□□□□ -1.72
HMGB3P15-201ENST00000507326 CCDC85CA6NKD9 419 aa4.31□□□□□ -1.72
HMGB3P15-201ENST00000507326 WNT9AO14904 365 aa4.31□□□□□ -1.72
HMGB3P15-201ENST00000507326 HMMRO75330 724 aa4.31□□□□□ -1.72
HMGB3P15-201ENST00000507326 MPIG6BO95866 241 aa4.31□□□□□ -1.72
HMGB3P15-201ENST00000507326 ADH4P08319 380 aa4.31□□□□□ -1.72
HMGB3P15-201ENST00000507326 ECE1P42892 770 aa4.31□□□□□ -1.72
HMGB3P15-201ENST00000507326 MEOX1P50221 254 aa4.31□□□□□ -1.72
HMGB3P15-201ENST00000507326 DNM2P50570 870 aa4.31□□□□□ -1.72
HMGB3P15-201ENST00000507326 ST5P78524 1137 aa4.31□□□□□ -1.72
HMGB3P15-201ENST00000507326 CD83Q01151 205 aa4.31□□□□□ -1.72
HMGB3P15-201ENST00000507326 TTF1Q15361 905 aaPredicted RBP4.31□□□□□ -1.72
HMGB3P15-201ENST00000507326 STILQ15468 1287 aa4.31□□□□□ -1.72
HMGB3P15-201ENST00000507326 CRY1Q16526 586 aa4.31□□□□□ -1.72
HMGB3P15-201ENST00000507326 GFOD2Q3B7J2 385 aa4.31□□□□□ -1.72
HMGB3P15-201ENST00000507326 INO80DQ53TQ3 878 aaPredicted RBP4.31□□□□□ -1.72
HMGB3P15-201ENST00000507326 BRDTQ58F21 947 aaPredicted RBP4.31□□□□□ -1.72
HMGB3P15-201ENST00000507326 FNDC7Q5VTL7 733 aa4.31□□□□□ -1.72
HMGB3P15-201ENST00000507326 ANO1Q5XXA6 986 aa4.31□□□□□ -1.72
HMGB3P15-201ENST00000507326 SPATC1Q76KD6 591 aa4.31□□□□□ -1.72
HMGB3P15-201ENST00000507326 LCA5Q86VQ0 697 aa4.31□□□□□ -1.72
HMGB3P15-201ENST00000507326 SGMS1Q86VZ5 419 aa4.31□□□□□ -1.72
HMGB3P15-201ENST00000507326 GPR135Q8IZ08 494 aa4.31□□□□□ -1.72
HMGB3P15-201ENST00000507326 D2HGDHQ8N465 521 aa4.31□□□□□ -1.72
HMGB3P15-201ENST00000507326 PPHLN1Q8NEY8 458 aaKnown RBP4.31□□□□□ -1.72
HMGB3P15-201ENST00000507326 WDR48Q8TAF3 677 aa4.31□□□□□ -1.72
HMGB3P15-201ENST00000507326 RPGRQ92834 1020 aaKnown RBP4.31□□□□□ -1.72
HMGB3P15-201ENST00000507326 PTPRN2Q92932 1015 aa4.31□□□□□ -1.72
HMGB3P15-201ENST00000507326 E2F7Q96AV8 911 aa4.31□□□□□ -1.72
HMGB3P15-201ENST00000507326 TMEM176AQ96HP8 235 aa4.31□□□□□ -1.72
HMGB3P15-201ENST00000507326 NEUROD6Q96NK8 337 aa4.31□□□□□ -1.72
HMGB3P15-201ENST00000507326 CDC6Q99741 560 aa4.31□□□□□ -1.72
HMGB3P15-201ENST00000507326 BTBD2Q9BX70 525 aa4.31□□□□□ -1.72
HMGB3P15-201ENST00000507326 AMNQ9BXJ7 453 aa4.31□□□□□ -1.72
HMGB3P15-201ENST00000507326 CCDC113Q9H0I3 377 aa4.31□□□□□ -1.72
HMGB3P15-201ENST00000507326 OR10A2Q9H208 303 aa4.31□□□□□ -1.72
HMGB3P15-201ENST00000507326 PPCSQ9HAB8 311 aa4.31□□□□□ -1.72
HMGB3P15-201ENST00000507326 UCKL1Q9NWZ5 548 aa4.31□□□□□ -1.72
HMGB3P15-201ENST00000507326 FAM184BQ9ULE4 1060 aa4.31□□□□□ -1.72
HMGB3P15-201ENST00000507326 MRPS23Q9Y3D9 190 aaKnown RBP4.31□□□□□ -1.72
HMGB3P15-201ENST00000507326 A0A0G2JNJ9 132 aa4.3□□□□□ -1.72
HMGB3P15-201ENST00000507326 ZNF561-AS1K7EIQ3 104 aa4.3□□□□□ -1.72
HMGB3P15-201ENST00000507326 ARVCFO00192 962 aa4.3□□□□□ -1.72
HMGB3P15-201ENST00000507326 SLC26A4O43511 780 aa4.3□□□□□ -1.72
HMGB3P15-201ENST00000507326 HIP1RO75146 1068 aa4.3□□□□□ -1.72
HMGB3P15-201ENST00000507326 MMEP08473 750 aa4.3□□□□□ -1.72
HMGB3P15-201ENST00000507326 TGM1P22735 817 aa4.3□□□□□ -1.72
HMGB3P15-201ENST00000507326 ATICP31939 592 aa4.3□□□□□ -1.72
HMGB3P15-201ENST00000507326 ANP32AP39687 249 aaKnown RBP4.3□□□□□ -1.72
HMGB3P15-201ENST00000507326 STAT5BP51692 787 aa4.3□□□□□ -1.72
HMGB3P15-201ENST00000507326 INHBCP55103 352 aa4.3□□□□□ -1.72
HMGB3P15-201ENST00000507326 HERVK_113P62684 666 aa4.3□□□□□ -1.72
HMGB3P15-201ENST00000507326 PURAQ00577 322 aaKnown RBP4.3□□□□□ -1.72
HMGB3P15-201ENST00000507326 HHEXQ03014 270 aa4.3□□□□□ -1.72
HMGB3P15-201ENST00000507326 GRM7Q14831 915 aa4.3□□□□□ -1.72
HMGB3P15-201ENST00000507326 PUM3Q15397 648 aaKnown RBP4.3□□□□□ -1.72
HMGB3P15-201ENST00000507326 FAM209AQ5JX71 171 aa4.3□□□□□ -1.72
HMGB3P15-201ENST00000507326 C10orf62Q5T681 223 aaPredicted RBP4.3□□□□□ -1.72
HMGB3P15-201ENST00000507326 KANK2Q63ZY3 851 aa4.3□□□□□ -1.72
HMGB3P15-201ENST00000507326 TMEM200BQ69YZ2 307 aa4.3□□□□□ -1.72
HMGB3P15-201ENST00000507326 TRIM68Q6AZZ1 485 aa4.3□□□□□ -1.72
HMGB3P15-201ENST00000507326 C16orf59Q7L2K0 433 aa4.3□□□□□ -1.72
HMGB3P15-201ENST00000507326 ZSCAN30Q86W11 494 aa4.3□□□□□ -1.72
HMGB3P15-201ENST00000507326 SCUBE1Q8IWY4 988 aa4.3□□□□□ -1.72
HMGB3P15-201ENST00000507326 ANKRD42Q8N9B4 389 aa4.3□□□□□ -1.72
HMGB3P15-201ENST00000507326 SHCBP1Q8NEM2 672 aa4.3□□□□□ -1.72
HMGB3P15-201ENST00000507326 ZNF483Q8TF39 744 aaPredicted RBP4.3□□□□□ -1.72
HMGB3P15-201ENST00000507326 TSR2Q969E8 191 aaKnown RBP4.3□□□□□ -1.72
HMGB3P15-201ENST00000507326 CDK5RAP3Q96JB5 506 aa4.3□□□□□ -1.72
HMGB3P15-201ENST00000507326 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.3□□□□□ -1.72
HMGB3P15-201ENST00000507326 SMURF1Q9HCE7 757 aa4.3□□□□□ -1.72
HMGB3P15-201ENST00000507326 MSL2Q9HCI7 577 aa4.3□□□□□ -1.72
HMGB3P15-201ENST00000507326 TMEM260Q9NX78 707 aa4.3□□□□□ -1.72
HMGB3P15-201ENST00000507326 CWC25Q9NXE8 425 aaPredicted RBP4.3□□□□□ -1.72
HMGB3P15-201ENST00000507326 Q9UFV3 132 aa4.3□□□□□ -1.72
HMGB3P15-201ENST00000507326 ISY1Q9ULR0 285 aaKnown RBP4.3□□□□□ -1.72
HMGB3P15-201ENST00000507326 PCDHA9Q9Y5H5 950 aa4.3□□□□□ -1.72
HMGB3P15-201ENST00000507326 PPP2R3BQ9Y5P8 575 aa4.3□□□□□ -1.72
HMGB3P15-201ENST00000507326 DYTNA2CJ06 578 aa4.29□□□□□ -1.72
HMGB3P15-201ENST00000507326 CCDC66A2RUB6 948 aa4.29□□□□□ -1.72
HMGB3P15-201ENST00000507326 CAPN14A8MX76 684 aa4.29□□□□□ -1.72
HMGB3P15-201ENST00000507326 FIBPO43427 364 aa4.29□□□□□ -1.72
HMGB3P15-201ENST00000507326 ADCY3O60266 1144 aa4.29□□□□□ -1.72
HMGB3P15-201ENST00000507326 CLASP2O75122 1294 aaKnown RBP4.29□□□□□ -1.72
HMGB3P15-201ENST00000507326 RNASEH2AO75792 299 aaKnown RBP4.29□□□□□ -1.72
HMGB3P15-201ENST00000507326 C6orf222P0C671 652 aaPredicted RBP4.29□□□□□ -1.72
HMGB3P15-201ENST00000507326 TERF1P54274 439 aa4.29□□□□□ -1.72
HMGB3P15-201ENST00000507326 SUMO1P63165 101 aaKnown RBP4.29□□□□□ -1.72
HMGB3P15-201ENST00000507326 BIRC3Q13489 604 aa4.29□□□□□ -1.72
HMGB3P15-201ENST00000507326 MOGSQ13724 837 aa4.29□□□□□ -1.72
HMGB3P15-201ENST00000507326 SEC23AQ15436 765 aa4.29□□□□□ -1.72
HMGB3P15-201ENST00000507326 CCDC96Q2M329 555 aa4.29□□□□□ -1.72
HMGB3P15-201ENST00000507326 FAM47CQ5HY64 1035 aa4.29□□□□□ -1.72
HMGB3P15-201ENST00000507326 FOXB2Q5VYV0 432 aa4.29□□□□□ -1.72
HMGB3P15-201ENST00000507326 KRT77Q7Z794 578 aa4.29□□□□□ -1.72
HMGB3P15-201ENST00000507326 LDLRAD3Q86YD5 345 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms