RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 RFX1P22670 979 aa17.27■□□□□ 0.36
HMGXB3-202ENST00000503427 EPHA7Q15375 998 aa17.27■□□□□ 0.36
HMGXB3-202ENST00000503427 Q3C1V9 767 aa17.27■□□□□ 0.36
HMGXB3-202ENST00000503427 BZW1Q7L1Q6 419 aaKnown RBP17.27■□□□□ 0.36
HMGXB3-202ENST00000503427 C7orf31Q8N865 590 aa17.27■□□□□ 0.36
HMGXB3-202ENST00000503427 NOP53Q9NZM5 478 aaKnown RBP17.27■□□□□ 0.36
HMGXB3-202ENST00000503427 TTC36A6NLP5 189 aa17.27■□□□□ 0.36
HMGXB3-202ENST00000503427 PP2D1A8MPX8 630 aa17.27■□□□□ 0.36
HMGXB3-202ENST00000503427 ATP1A1P05023 1023 aaKnown RBP17.27■□□□□ 0.36
HMGXB3-202ENST00000503427 PSMA2P25787 234 aa17.27■□□□□ 0.36
HMGXB3-202ENST00000503427 OSTNP61366 133 aa17.27■□□□□ 0.36
HMGXB3-202ENST00000503427 TTLL4Q14679 1199 aa17.27■□□□□ 0.36
HMGXB3-202ENST00000503427 ARMCX2Q7L311 632 aa17.27■□□□□ 0.36
HMGXB3-202ENST00000503427 TTC25Q96NG3 672 aa17.27■□□□□ 0.36
HMGXB3-202ENST00000503427 ZNF302Q9NR11 478 aa17.27■□□□□ 0.36
HMGXB3-202ENST00000503427 POTEFA5A3E0 1075 aa17.27■□□□□ 0.36
HMGXB3-202ENST00000503427 CHUKO15111 745 aa17.27■□□□□ 0.36
HMGXB3-202ENST00000503427 WDR46O15213 610 aaKnown RBP17.27■□□□□ 0.36
HMGXB3-202ENST00000503427 POTEIP0CG38 1075 aa17.27■□□□□ 0.36
HMGXB3-202ENST00000503427 PHKA2P46019 1235 aa17.27■□□□□ 0.36
HMGXB3-202ENST00000503427 GCLMP48507 274 aa17.27■□□□□ 0.36
HMGXB3-202ENST00000503427 CEP55Q53EZ4 464 aa17.27■□□□□ 0.36
HMGXB3-202ENST00000503427 PDXDC1Q6P996 788 aa17.27■□□□□ 0.36
HMGXB3-202ENST00000503427 POTEGQ6S5H5 508 aa17.27■□□□□ 0.36
HMGXB3-202ENST00000503427 POTEEQ6S8J3 1075 aa17.27■□□□□ 0.36
HMGXB3-202ENST00000503427 RSRC2Q7L4I2 434 aaKnown RBP17.27■□□□□ 0.36
HMGXB3-202ENST00000503427 CATSPER4Q7RTX7 472 aa17.27■□□□□ 0.36
HMGXB3-202ENST00000503427 TMEM35BQ8NCS4 154 aa17.27■□□□□ 0.36
HMGXB3-202ENST00000503427 PSPC1Q8WXF1 523 aaKnown RBP17.27■□□□□ 0.36
HMGXB3-202ENST00000503427 CFAP36Q96G28 342 aa17.27■□□□□ 0.36
HMGXB3-202ENST00000503427 LRRC4Q9HBW1 653 aa17.27■□□□□ 0.36
HMGXB3-202ENST00000503427 FAF1Q9UNN5 650 aaPredicted RBP17.27■□□□□ 0.36
HMGXB3-202ENST00000503427 IQCA1LA6NCM1 817 aa17.27■□□□□ 0.35
HMGXB3-202ENST00000503427 PDE1CQ14123 709 aaPredicted RBP17.27■□□□□ 0.35
HMGXB3-202ENST00000503427 HEXIM2Q96MH2 286 aaKnown RBP17.27■□□□□ 0.35
HMGXB3-202ENST00000503427 LRFN2Q9ULH4 789 aa17.27■□□□□ 0.35
HMGXB3-202ENST00000503427 ATP8B3O60423 1300 aa17.27■□□□□ 0.35
HMGXB3-202ENST00000503427 RASA4BC9J798 803 aa17.27■□□□□ 0.35
HMGXB3-202ENST00000503427 RASA4O43374 803 aa17.27■□□□□ 0.35
HMGXB3-202ENST00000503427 SMARCA1P28370 1054 aa17.27■□□□□ 0.35
HMGXB3-202ENST00000503427 ATP6V1G3Q96LB4 118 aa17.27■□□□□ 0.35
HMGXB3-202ENST00000503427 TRIM55Q9BYV6 548 aa17.27■□□□□ 0.35
HMGXB3-202ENST00000503427 C2orf40Q9H1Z8 148 aa17.27■□□□□ 0.35
HMGXB3-202ENST00000503427 MST1RQ04912 1400 aa17.26■□□□□ 0.35
HMGXB3-202ENST00000503427 MROH2AA6NES4 1674 aa17.26■□□□□ 0.35
HMGXB3-202ENST00000503427 GPR75-ASB3A0A0A6YYF3 556 aa17.26■□□□□ 0.35
HMGXB3-202ENST00000503427 SPDYE16A6NNV3 312 aaPredicted RBP17.26■□□□□ 0.35
HMGXB3-202ENST00000503427 MTF1Q14872 753 aa17.26■□□□□ 0.35
HMGXB3-202ENST00000503427 SPDYE2Q495Y8 402 aa17.26■□□□□ 0.35
HMGXB3-202ENST00000503427 ZNF667Q5HYK9 610 aa17.26■□□□□ 0.35
HMGXB3-202ENST00000503427 KRT39Q6A163 491 aa17.26■□□□□ 0.35
HMGXB3-202ENST00000503427 RSBN1LQ6PCB5 846 aaPredicted RBP17.26■□□□□ 0.35
HMGXB3-202ENST00000503427 FASTKD5Q7L8L6 764 aaKnown RBP17.26■□□□□ 0.35
HMGXB3-202ENST00000503427 MCUQ8NE86 351 aa17.26■□□□□ 0.35
HMGXB3-202ENST00000503427 PDZD8Q8NEN9 1154 aa17.26■□□□□ 0.35
HMGXB3-202ENST00000503427 RBM46Q8TBY0 533 aaKnown RBP17.26■□□□□ 0.35
HMGXB3-202ENST00000503427 DEPDC1BQ8WUY9 529 aa17.26■□□□□ 0.35
HMGXB3-202ENST00000503427 PPWD1Q96BP3 646 aaKnown RBP17.26■□□□□ 0.35
HMGXB3-202ENST00000503427 NCAPGQ9BPX3 1015 aa17.26■□□□□ 0.35
HMGXB3-202ENST00000503427 DDX47Q9H0S4 455 aaKnown RBP17.26■□□□□ 0.35
HMGXB3-202ENST00000503427 CACYBPQ9HB71 228 aaKnown RBP17.26■□□□□ 0.35
HMGXB3-202ENST00000503427 ITIH6Q6UXX5 1313 aa17.26■□□□□ 0.35
HMGXB3-202ENST00000503427 MEGF6O75095 1541 aa17.26■□□□□ 0.35
HMGXB3-202ENST00000503427 SLC26A4O43511 780 aa17.26■□□□□ 0.35
HMGXB3-202ENST00000503427 RASA1P20936 1047 aa17.26■□□□□ 0.35
HMGXB3-202ENST00000503427 SPATA4Q8NEY3 305 aa17.26■□□□□ 0.35
HMGXB3-202ENST00000503427 FAM151AQ8WW52 585 aa17.26■□□□□ 0.35
HMGXB3-202ENST00000503427 LXNQ9BS40 222 aa17.26■□□□□ 0.35
HMGXB3-202ENST00000503427 RPAP3Q9H6T3 665 aaPredicted RBP17.26■□□□□ 0.35
HMGXB3-202ENST00000503427 TUBE1Q9UJT0 475 aa17.26■□□□□ 0.35
HMGXB3-202ENST00000503427 LMNAP02545 664 aaKnown RBP17.26■□□□□ 0.35
HMGXB3-202ENST00000503427 ANTXR2P58335 489 aa17.26■□□□□ 0.35
HMGXB3-202ENST00000503427 DRAP1Q14919 205 aaPredicted RBP17.26■□□□□ 0.35
HMGXB3-202ENST00000503427 SLC10A5Q5PT55 438 aa17.26■□□□□ 0.35
HMGXB3-202ENST00000503427 MTRQ99707 1265 aa17.26■□□□□ 0.35
HMGXB3-202ENST00000503427 EIF2AK1Q9BQI3 630 aaKnown RBP17.26■□□□□ 0.35
HMGXB3-202ENST00000503427 TUFT1Q9NNX1 390 aa17.26■□□□□ 0.35
HMGXB3-202ENST00000503427 ESYT3A0FGR9 886 aa17.26■□□□□ 0.35
HMGXB3-202ENST00000503427 THOC5Q13769 683 aaKnown RBP17.26■□□□□ 0.35
HMGXB3-202ENST00000503427 SYT2Q8N9I0 419 aaPredicted RBP17.26■□□□□ 0.35
HMGXB3-202ENST00000503427 SLC16A10Q8TF71 515 aa17.26■□□□□ 0.35
HMGXB3-202ENST00000503427 SERPINI1Q99574 410 aa17.26■□□□□ 0.35
HMGXB3-202ENST00000503427 A0A0G2JLW4 131 aa17.25■□□□□ 0.35
HMGXB3-202ENST00000503427 NDUFB10O96000 172 aa17.25■□□□□ 0.35
HMGXB3-202ENST00000503427 S100BP04271 92 aaPredicted RBP17.25■□□□□ 0.35
HMGXB3-202ENST00000503427 PPP4CP60510 307 aa17.25■□□□□ 0.35
HMGXB3-202ENST00000503427 E2F4Q16254 413 aa17.25■□□□□ 0.35
HMGXB3-202ENST00000503427 SCARA5Q6ZMJ2 495 aa17.25■□□□□ 0.35
HMGXB3-202ENST00000503427 MAML1Q92585 1016 aa17.25■□□□□ 0.35
HMGXB3-202ENST00000503427 ZWILCHQ9H900 591 aa17.25■□□□□ 0.35
HMGXB3-202ENST00000503427 TOPORSQ9NS56 1045 aaPredicted RBP17.25■□□□□ 0.35
HMGXB3-202ENST00000503427 GABBR1Q9UBS5 961 aa17.25■□□□□ 0.35
HMGXB3-202ENST00000503427 PFASO15067 1338 aa17.25■□□□□ 0.35
HMGXB3-202ENST00000503427 TFDP2Q14188 446 aa17.25■□□□□ 0.35
HMGXB3-202ENST00000503427 MICALL2Q8IY33 904 aa17.25■□□□□ 0.35
HMGXB3-202ENST00000503427 ZNF564Q8TBZ8 553 aaPredicted RBP17.25■□□□□ 0.35
HMGXB3-202ENST00000503427 SPDL1Q96EA4 605 aa17.25■□□□□ 0.35
HMGXB3-202ENST00000503427 KLC2Q9H0B6 622 aa17.25■□□□□ 0.35
HMGXB3-202ENST00000503427 ANKRD65E5RJM6 399 aa17.25■□□□□ 0.35
HMGXB3-202ENST00000503427 SETSIPP0DME0 302 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms