RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 TBC1D13Q9NVG8 400 aa16.03■□□□□ 0.16
VARS-228ENST00000495010 SSBP05455 408 aaKnown RBP eCLIP16.02■□□□□ 0.16
VARS-228ENST00000495010 DRP2Q13474 957 aa16.02■□□□□ 0.16
VARS-228ENST00000495010 TDGQ13569 410 aa16.02■□□□□ 0.16
VARS-228ENST00000495010 TARBP2Q15633 366 aaKnown RBP16.02■□□□□ 0.16
VARS-228ENST00000495010 Q6ZUG5 572 aa16.02■□□□□ 0.16
VARS-228ENST00000495010 GPR149Q86SP6 731 aa16.02■□□□□ 0.16
VARS-228ENST00000495010 ZNF410Q86VK4 478 aa16.02■□□□□ 0.16
VARS-228ENST00000495010 RDM1Q8NG50 284 aa16.02■□□□□ 0.16
VARS-228ENST00000495010 SLC5A5Q92911 643 aa16.02■□□□□ 0.16
VARS-228ENST00000495010 PHKBQ93100 1093 aa16.02■□□□□ 0.16
VARS-228ENST00000495010 NIFKQ9BYG3 293 aaKnown RBP16.02■□□□□ 0.16
VARS-228ENST00000495010 SUCLA2Q9P2R7 463 aaPredicted RBP16.02■□□□□ 0.16
VARS-228ENST00000495010 CACNA1HO95180 2353 aa16.02■□□□□ 0.15
VARS-228ENST00000495010 DDX11L8A8MPP1 907 aa16.01■□□□□ 0.15
VARS-228ENST00000495010 STK25O00506 426 aa16.01■□□□□ 0.15
VARS-228ENST00000495010 OFD1O75665 1012 aa16.01■□□□□ 0.15
VARS-228ENST00000495010 RFX1P22670 979 aa16.01■□□□□ 0.15
VARS-228ENST00000495010 SLC11A1P49279 550 aa16.01■□□□□ 0.15
VARS-228ENST00000495010 NLRP5P59047 1200 aa16.01■□□□□ 0.15
VARS-228ENST00000495010 PTPN14Q15678 1187 aa16.01■□□□□ 0.15
VARS-228ENST00000495010 ELMSAN1Q6PJG2 1045 aa16.01■□□□□ 0.15
VARS-228ENST00000495010 ADSSL1Q8N142 457 aa16.01■□□□□ 0.15
VARS-228ENST00000495010 BRF1Q92994 677 aa16.01■□□□□ 0.15
VARS-228ENST00000495010 NLRP4Q96MN2 994 aa16.01■□□□□ 0.15
VARS-228ENST00000495010 RTP3Q9BQQ7 232 aa16.01■□□□□ 0.15
VARS-228ENST00000495010 JPH2Q9BR39 696 aaPredicted RBP16.01■□□□□ 0.15
VARS-228ENST00000495010 SLC26A6Q9BXS9 759 aa16.01■□□□□ 0.15
VARS-228ENST00000495010 C22orf23Q9BZE7 217 aa16.01■□□□□ 0.15
VARS-228ENST00000495010 DNAJB4Q9UDY4 337 aa16.01■□□□□ 0.15
VARS-228ENST00000495010 ZNF623O75123 536 aa16■□□□□ 0.15
VARS-228ENST00000495010 ALDH2P05091 517 aa16■□□□□ 0.15
VARS-228ENST00000495010 AOC1P19801 751 aa16■□□□□ 0.15
VARS-228ENST00000495010 BCL7CQ8WUZ0 217 aaPredicted RBP16■□□□□ 0.15
VARS-228ENST00000495010 GJA10Q969M2 543 aa16■□□□□ 0.15
VARS-228ENST00000495010 KLHL5Q96PQ7 755 aa16■□□□□ 0.15
VARS-228ENST00000495010 SH2D3AQ9BRG2 576 aa16■□□□□ 0.15
VARS-228ENST00000495010 RNF26Q9BY78 433 aaPredicted RBP16■□□□□ 0.15
VARS-228ENST00000495010 MRPL17Q9NRX2 175 aaKnown RBP16■□□□□ 0.15
VARS-228ENST00000495010 VPS54Q9P1Q0 977 aa16■□□□□ 0.15
VARS-228ENST00000495010 FAN1Q9Y2M0 1017 aa16■□□□□ 0.15
VARS-228ENST00000495010 WDR81Q562E7 1941 aa16■□□□□ 0.15
VARS-228ENST00000495010 USP34Q70CQ2 3546 aa15.99■□□□□ 0.15
VARS-228ENST00000495010 IGKV6-21A0A0C4DH24 114 aa15.99■□□□□ 0.15
VARS-228ENST00000495010 TMEM150BA6NC51 233 aa15.99■□□□□ 0.15
VARS-228ENST00000495010 CPA1P15085 419 aa15.99■□□□□ 0.15
VARS-228ENST00000495010 ID4P47928 161 aa15.99■□□□□ 0.15
VARS-228ENST00000495010 CLCN4P51793 760 aa15.99■□□□□ 0.15
VARS-228ENST00000495010 NONOQ15233 471 aaKnown RBP eCLIP15.99■□□□□ 0.15
VARS-228ENST00000495010 LETM2Q2VYF4 491 aa15.99■□□□□ 0.15
VARS-228ENST00000495010 Q4G0T1 1027 aa15.99■□□□□ 0.15
VARS-228ENST00000495010 BMP2KLQ5H9B9 411 aa15.99■□□□□ 0.15
VARS-228ENST00000495010 CWF19L1Q69YN2 538 aaKnown RBP15.99■□□□□ 0.15
VARS-228ENST00000495010 SIX5Q8N196 739 aa15.99■□□□□ 0.15
VARS-228ENST00000495010 TBCKQ8TEA7 893 aa15.99■□□□□ 0.15
VARS-228ENST00000495010 RSAD1Q9HA92 442 aa15.99■□□□□ 0.15
VARS-228ENST00000495010 KCNK12Q9HB15 430 aa15.99■□□□□ 0.15
VARS-228ENST00000495010 IGSF9Q9P2J2 1179 aa15.99■□□□□ 0.15
VARS-228ENST00000495010 KANSL3Q9P2N6 904 aa15.99■□□□□ 0.15
VARS-228ENST00000495010 DPP7Q9UHL4 492 aa15.99■□□□□ 0.15
VARS-228ENST00000495010 DUSP12Q9UNI6 340 aa15.99■□□□□ 0.15
VARS-228ENST00000495010 SSX2IPQ9Y2D8 614 aa15.99■□□□□ 0.15
VARS-228ENST00000495010 PCDHB2Q9Y5E7 798 aa15.99■□□□□ 0.15
VARS-228ENST00000495010 MEIS3P2A8K0S8 358 aa15.98■□□□□ 0.15
VARS-228ENST00000495010 PI15O43692 258 aa15.98■□□□□ 0.15
VARS-228ENST00000495010 MAFO75444 373 aaPredicted RBP15.98■□□□□ 0.15
VARS-228ENST00000495010 PSMD10O75832 226 aa15.98■□□□□ 0.15
VARS-228ENST00000495010 URODP06132 367 aa15.98■□□□□ 0.15
VARS-228ENST00000495010 CNPP09543 421 aaKnown RBP15.98■□□□□ 0.15
VARS-228ENST00000495010 GBP2P32456 591 aaPredicted RBP15.98■□□□□ 0.15
VARS-228ENST00000495010 ANGPT1Q15389 498 aa15.98■□□□□ 0.15
VARS-228ENST00000495010 BLOC1S2Q6QNY1 142 aa15.98■□□□□ 0.15
VARS-228ENST00000495010 C15orf39Q6ZRI6 1047 aa15.98■□□□□ 0.15
VARS-228ENST00000495010 ERMP1Q7Z2K6 904 aa15.98■□□□□ 0.15
VARS-228ENST00000495010 ZNF280BQ86YH2 543 aa15.98■□□□□ 0.15
VARS-228ENST00000495010 KSR1Q8IVT5 923 aa15.98■□□□□ 0.15
VARS-228ENST00000495010 CCDC105Q8IYK2 499 aa15.98■□□□□ 0.15
VARS-228ENST00000495010 KCNG4Q8TDN1 519 aa15.98■□□□□ 0.15
VARS-228ENST00000495010 STAMQ92783 540 aa15.98■□□□□ 0.15
VARS-228ENST00000495010 JAKMIP1Q96N16 626 aaKnown RBP15.98■□□□□ 0.15
VARS-228ENST00000495010 TMEM175Q9BSA9 504 aa15.98■□□□□ 0.15
VARS-228ENST00000495010 SH3GLB2Q9NR46 395 aa15.98■□□□□ 0.15
VARS-228ENST00000495010 PTPRZ1P23471 2315 aaPredicted RBP15.97■□□□□ 0.15
VARS-228ENST00000495010 CNTNAP2Q9UHC6 1331 aa15.97■□□□□ 0.15
VARS-228ENST00000495010 C2CD2LO14523 706 aa15.97■□□□□ 0.15
VARS-228ENST00000495010 NPR3P17342 541 aa15.97■□□□□ 0.15
VARS-228ENST00000495010 AK2P54819 239 aa15.97■□□□□ 0.15
VARS-228ENST00000495010 PSMC5P62195 406 aa15.97■□□□□ 0.15
VARS-228ENST00000495010 EXOC8Q8IYI6 725 aa15.97■□□□□ 0.15
VARS-228ENST00000495010 TRIM22Q8IYM9 498 aa15.97■□□□□ 0.15
VARS-228ENST00000495010 DTWD2Q8NBA8 298 aa15.97■□□□□ 0.15
VARS-228ENST00000495010 SLC7A3Q8WY07 619 aa15.97■□□□□ 0.15
VARS-228ENST00000495010 VN1R3Q9BXE9 311 aa15.97■□□□□ 0.15
VARS-228ENST00000495010 MAN1C1Q9NR34 630 aa15.97■□□□□ 0.15
VARS-228ENST00000495010 AGPAT5Q9NUQ2 364 aa15.97■□□□□ 0.15
VARS-228ENST00000495010 COL4A3BPQ9Y5P4 624 aa15.97■□□□□ 0.15
VARS-228ENST00000495010 NRP1O14786 923 aa15.96■□□□□ 0.15
VARS-228ENST00000495010 DKC1O60832 514 aaKnown RBP eCLIP15.96■□□□□ 0.15
VARS-228ENST00000495010 CDC45O75419 566 aa15.96■□□□□ 0.15
VARS-228ENST00000495010 DDHD2O94830 711 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms