RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 GDPD2Q9HCC8 539 aa14.98□□□□□ -0.01
COL1A1-208ENST00000494334 C1orf112Q9NSG2 853 aa14.98□□□□□ -0.01
COL1A1-208ENST00000494334 LOXHD1Q8IVV2 1947 aa14.98□□□□□ -0.01
COL1A1-208ENST00000494334 HOXA11P31270 313 aaPredicted RBP14.97□□□□□ -0.01
COL1A1-208ENST00000494334 STAT6P42226 847 aa14.97□□□□□ -0.01
COL1A1-208ENST00000494334 NPTX2P47972 431 aa14.97□□□□□ -0.01
COL1A1-208ENST00000494334 SARSP49591 514 aaKnown RBP14.97□□□□□ -0.01
COL1A1-208ENST00000494334 PEX3P56589 373 aa14.97□□□□□ -0.01
COL1A1-208ENST00000494334 HTRA4P83105 476 aaPredicted RBP14.97□□□□□ -0.01
COL1A1-208ENST00000494334 GIT2Q14161 759 aa14.97□□□□□ -0.01
COL1A1-208ENST00000494334 PCBP1Q15365 356 aaKnown RBP eCLIP14.97□□□□□ -0.01
COL1A1-208ENST00000494334 E2F4Q16254 413 aa14.97□□□□□ -0.01
COL1A1-208ENST00000494334 AMHR2Q16671 573 aa14.97□□□□□ -0.01
COL1A1-208ENST00000494334 SV2BQ7L1I2 683 aa14.97□□□□□ -0.01
COL1A1-208ENST00000494334 ZBTB8OSQ8IWT0 167 aa14.97□□□□□ -0.01
COL1A1-208ENST00000494334 TIFAQ96CG3 184 aa14.97□□□□□ -0.01
COL1A1-208ENST00000494334 RAD9AQ99638 391 aa14.97□□□□□ -0.01
COL1A1-208ENST00000494334 REEP2Q9BRK0 252 aa14.97□□□□□ -0.01
COL1A1-208ENST00000494334 KIFC3Q9BVG8 833 aa14.97□□□□□ -0.01
COL1A1-208ENST00000494334 C2orf40Q9H1Z8 148 aa14.97□□□□□ -0.01
COL1A1-208ENST00000494334 NKX2-4Q9H2Z4 354 aa14.97□□□□□ -0.01
COL1A1-208ENST00000494334 FZD8Q9H461 694 aa14.97□□□□□ -0.01
COL1A1-208ENST00000494334 C17orf75Q9HAS0 396 aa14.97□□□□□ -0.01
COL1A1-208ENST00000494334 AGPAT5Q9NUQ2 364 aa14.97□□□□□ -0.01
COL1A1-208ENST00000494334 FAM13BQ9NYF5 915 aa14.97□□□□□ -0.01
COL1A1-208ENST00000494334 PIN4Q9Y237 131 aaKnown RBP14.97□□□□□ -0.01
COL1A1-208ENST00000494334 MICAL3Q7RTP6 2002 aa14.97□□□□□ -0.01
COL1A1-208ENST00000494334 ADGRA3Q8IWK6 1321 aa14.96□□□□□ -0.01
COL1A1-208ENST00000494334 A0A0U1RQF3 1178 aa14.96□□□□□ -0.01
COL1A1-208ENST00000494334 CCDC169A6NNP5 214 aa14.96□□□□□ -0.01
COL1A1-208ENST00000494334 TSPAN1O60635 241 aa14.96□□□□□ -0.01
COL1A1-208ENST00000494334 ERLIN2O94905 339 aa14.96□□□□□ -0.01
COL1A1-208ENST00000494334 CA3P07451 260 aa14.96□□□□□ -0.01
COL1A1-208ENST00000494334 PLS3P13797 630 aa14.96□□□□□ -0.01
COL1A1-208ENST00000494334 IBSPP21815 317 aaPredicted RBP14.96□□□□□ -0.01
COL1A1-208ENST00000494334 DMP1Q13316 513 aaPredicted RBP14.96□□□□□ -0.01
COL1A1-208ENST00000494334 NPAS4Q8IUM7 802 aa14.96□□□□□ -0.01
COL1A1-208ENST00000494334 DEPTORQ8TB45 409 aa14.96□□□□□ -0.01
COL1A1-208ENST00000494334 NTPCRQ9BSD7 190 aaKnown RBP14.96□□□□□ -0.01
COL1A1-208ENST00000494334 DACT1Q9NYF0 836 aa14.96□□□□□ -0.01
COL1A1-208ENST00000494334 CHMP5Q9NZZ3 219 aa14.96□□□□□ -0.01
COL1A1-208ENST00000494334 ODF2LQ9ULJ1 636 aa14.96□□□□□ -0.01
COL1A1-208ENST00000494334 INSL6Q9Y581 213 aa14.96□□□□□ -0.01
COL1A1-208ENST00000494334 PCDHB7Q9Y5E2 793 aa14.96□□□□□ -0.01
COL1A1-208ENST00000494334 LCHNA4D1U4 455 aa14.95□□□□□ -0.02
COL1A1-208ENST00000494334 MYMKA6NI61 221 aa14.95□□□□□ -0.02
COL1A1-208ENST00000494334 POLR2DO15514 142 aaKnown RBP14.95□□□□□ -0.02
COL1A1-208ENST00000494334 B4GALT5O43286 388 aa14.95□□□□□ -0.02
COL1A1-208ENST00000494334 DGKIO75912 1065 aa14.95□□□□□ -0.02
COL1A1-208ENST00000494334 ARHGEF15O94989 841 aa14.95□□□□□ -0.02
COL1A1-208ENST00000494334 KRT18P05783 430 aaKnown RBP14.95□□□□□ -0.02
COL1A1-208ENST00000494334 STAG3L1P0CL83 205 aa14.95□□□□□ -0.02
COL1A1-208ENST00000494334 CMA1P23946 247 aa14.95□□□□□ -0.02
COL1A1-208ENST00000494334 AXLP30530 894 aa14.95□□□□□ -0.02
COL1A1-208ENST00000494334 FAM187BQ17R55 369 aa14.95□□□□□ -0.02
COL1A1-208ENST00000494334 TWF2Q6IBS0 349 aaKnown RBP14.95□□□□□ -0.02
COL1A1-208ENST00000494334 PPP4R3CPQ6ZMV5 832 aa14.95□□□□□ -0.02
COL1A1-208ENST00000494334 ECHDC2Q86YB7 292 aa14.95□□□□□ -0.02
COL1A1-208ENST00000494334 IQUBQ8NA54 791 aa14.95□□□□□ -0.02
COL1A1-208ENST00000494334 SPIRE2Q8WWL2 714 aa14.95□□□□□ -0.02
COL1A1-208ENST00000494334 DDX12PQ92771 950 aa14.95□□□□□ -0.02
COL1A1-208ENST00000494334 DHX58Q96C10 678 aa14.95□□□□□ -0.02
COL1A1-208ENST00000494334 ZNF689Q96CS4 500 aaPredicted RBP14.95□□□□□ -0.02
COL1A1-208ENST00000494334 CPB2Q96IY4 423 aa14.95□□□□□ -0.02
COL1A1-208ENST00000494334 PRIMPOLQ96LW4 560 aa14.95□□□□□ -0.02
COL1A1-208ENST00000494334 YME1L1Q96TA2 773 aa14.95□□□□□ -0.02
COL1A1-208ENST00000494334 TRAIPQ9BWF2 469 aa14.95□□□□□ -0.02
COL1A1-208ENST00000494334 CCDC113Q9H0I3 377 aa14.95□□□□□ -0.02
COL1A1-208ENST00000494334 TTYH1Q9H313 450 aaPredicted RBP14.95□□□□□ -0.02
COL1A1-208ENST00000494334 ELAC1Q9H777 363 aaKnown RBP14.95□□□□□ -0.02
COL1A1-208ENST00000494334 SLC28A3Q9HAS3 691 aa14.95□□□□□ -0.02
COL1A1-208ENST00000494334 RC3H2Q9HBD1 1191 aaKnown RBP14.95□□□□□ -0.02
COL1A1-208ENST00000494334 KMT5AQ9NQR1 393 aa14.95□□□□□ -0.02
COL1A1-208ENST00000494334 PRMT7Q9NVM4 692 aaPredicted RBP14.95□□□□□ -0.02
COL1A1-208ENST00000494334 TMEM161AQ9NX61 479 aa14.95□□□□□ -0.02
COL1A1-208ENST00000494334 LRFN2Q9ULH4 789 aa14.95□□□□□ -0.02
COL1A1-208ENST00000494334 PTPRSQ13332 1948 aa14.94□□□□□ -0.02
COL1A1-208ENST00000494334 TTC3P53804 2025 aa14.94□□□□□ -0.02
COL1A1-208ENST00000494334 TMEM265A0A087WTH1 108 aa14.94□□□□□ -0.02
COL1A1-208ENST00000494334 A0A1B0GVL5 298 aa14.94□□□□□ -0.02
COL1A1-208ENST00000494334 TTLL13PA6NNM8 815 aa14.94□□□□□ -0.02
COL1A1-208ENST00000494334 SLC16A4O15374 487 aa14.94□□□□□ -0.02
COL1A1-208ENST00000494334 EDN1P05305 212 aa14.94□□□□□ -0.02
COL1A1-208ENST00000494334 ARF4P18085 180 aaPredicted RBP14.94□□□□□ -0.02
COL1A1-208ENST00000494334 ZNF131P52739 623 aa14.94□□□□□ -0.02
COL1A1-208ENST00000494334 EFNA5P52803 228 aa14.94□□□□□ -0.02
COL1A1-208ENST00000494334 NCBP1Q09161 790 aaKnown RBP14.94□□□□□ -0.02
COL1A1-208ENST00000494334 MAPK6Q16659 721 aa14.94□□□□□ -0.02
COL1A1-208ENST00000494334 UBXN11Q5T124 520 aa14.94□□□□□ -0.02
COL1A1-208ENST00000494334 ZNF697Q5TEC3 545 aa14.94□□□□□ -0.02
COL1A1-208ENST00000494334 Q7L0L9 218 aa14.94□□□□□ -0.02
COL1A1-208ENST00000494334 DYMQ7RTS9 669 aa14.94□□□□□ -0.02
COL1A1-208ENST00000494334 ZNF598Q86UK7 904 aaKnown RBP14.94□□□□□ -0.02
COL1A1-208ENST00000494334 SP7Q8TDD2 431 aaPredicted RBP14.94□□□□□ -0.02
COL1A1-208ENST00000494334 SEMA6BQ9H3T3 888 aa14.94□□□□□ -0.02
COL1A1-208ENST00000494334 CUEDC2Q9H467 287 aa14.94□□□□□ -0.02
COL1A1-208ENST00000494334 ZNF576Q9H609 170 aa14.94□□□□□ -0.02
COL1A1-208ENST00000494334 TMEM134Q9H6X4 195 aa14.94□□□□□ -0.02
COL1A1-208ENST00000494334 FAM105AQ9NUU6 356 aa14.94□□□□□ -0.02
COL1A1-208ENST00000494334 LARSQ9P2J5 1176 aaKnown RBP14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms