RNA–Protein interactions for RNA: ENST00000492485.5

TRIOBP-211, Transcript of TRIO and F-actin binding protein, humanhuman

TSL 1 (best)

Gene TRIOBP, Length 3,948 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOBP-211ENST00000492485 ZBED8Q8IZ13 594 aa13.26□□□□□ -0.29
TRIOBP-211ENST00000492485 ZNF34Q8IZ26 560 aa13.26□□□□□ -0.29
TRIOBP-211ENST00000492485 ZNF564Q8TBZ8 553 aaPredicted RBP13.26□□□□□ -0.29
TRIOBP-211ENST00000492485 ATXN7L3BQ96GX2 97 aa13.26□□□□□ -0.29
TRIOBP-211ENST00000492485 NT5C1BQ96P26 610 aa13.26□□□□□ -0.29
TRIOBP-211ENST00000492485 NUDCD1Q96RS6 583 aa13.26□□□□□ -0.29
TRIOBP-211ENST00000492485 C10orf88Q9H8K7 445 aa13.26□□□□□ -0.29
TRIOBP-211ENST00000492485 SEPT10Q9P0V9 454 aa13.26□□□□□ -0.29
TRIOBP-211ENST00000492485 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.26□□□□□ -0.29
TRIOBP-211ENST00000492485 PPFIA2O75334 1257 aa13.25□□□□□ -0.29
TRIOBP-211ENST00000492485 SERPINB2P05120 415 aa13.25□□□□□ -0.29
TRIOBP-211ENST00000492485 NPEPPSP55786 919 aa13.25□□□□□ -0.29
TRIOBP-211ENST00000492485 MTERF2Q49AM1 385 aa13.25□□□□□ -0.29
TRIOBP-211ENST00000492485 NT5DC1Q5TFE4 455 aa13.25□□□□□ -0.29
TRIOBP-211ENST00000492485 LIN9Q5TKA1 542 aa13.25□□□□□ -0.29
TRIOBP-211ENST00000492485 SLFN12Q8IYM2 578 aa13.25□□□□□ -0.29
TRIOBP-211ENST00000492485 ARHGEF1Q92888 912 aaKnown RBP13.25□□□□□ -0.29
TRIOBP-211ENST00000492485 FAM213AQ9BRX8 229 aa13.25□□□□□ -0.29
TRIOBP-211ENST00000492485 PAGR1Q9BTK6 254 aa13.25□□□□□ -0.29
TRIOBP-211ENST00000492485 NPHS2Q9NP85 383 aa13.25□□□□□ -0.29
TRIOBP-211ENST00000492485 RNF14Q9UBS8 474 aa13.25□□□□□ -0.29
TRIOBP-211ENST00000492485 MROH1Q8NDA8 1641 aa13.25□□□□□ -0.29
TRIOBP-211ENST00000492485 TULP2O00295 520 aa13.25□□□□□ -0.29
TRIOBP-211ENST00000492485 GJB6O95452 261 aa13.25□□□□□ -0.29
TRIOBP-211ENST00000492485 TROVE2P10155 538 aaKnown RBP eCLIP13.25□□□□□ -0.29
TRIOBP-211ENST00000492485 MARK3P27448 753 aa13.25□□□□□ -0.29
TRIOBP-211ENST00000492485 SOX11P35716 441 aa13.25□□□□□ -0.29
TRIOBP-211ENST00000492485 MARCKSL1P49006 195 aa13.25□□□□□ -0.29
TRIOBP-211ENST00000492485 TFAMQ00059 246 aaKnown RBP13.25□□□□□ -0.29
TRIOBP-211ENST00000492485 RNASELQ05823 741 aaKnown RBP13.25□□□□□ -0.29
TRIOBP-211ENST00000492485 PDE1CQ14123 709 aaPredicted RBP13.25□□□□□ -0.29
TRIOBP-211ENST00000492485 AP1ARQ63HQ0 302 aa13.25□□□□□ -0.29
TRIOBP-211ENST00000492485 TMEM270Q6UE05 265 aa13.25□□□□□ -0.29
TRIOBP-211ENST00000492485 PTF1AQ7RTS3 328 aa13.25□□□□□ -0.29
TRIOBP-211ENST00000492485 CATSPER3Q86XQ3 398 aa13.25□□□□□ -0.29
TRIOBP-211ENST00000492485 DHX38Q92620 1227 aaKnown RBP13.25□□□□□ -0.29
TRIOBP-211ENST00000492485 KAT5Q92993 513 aa13.25□□□□□ -0.29
TRIOBP-211ENST00000492485 CEP170P1Q96L14 293 aa13.25□□□□□ -0.29
TRIOBP-211ENST00000492485 C7orf25Q9BPX7 421 aa13.25□□□□□ -0.29
TRIOBP-211ENST00000492485 MKNK1Q9BUB5 465 aa13.25□□□□□ -0.29
TRIOBP-211ENST00000492485 INTS2Q9H0H0 1204 aaKnown RBP13.25□□□□□ -0.29
TRIOBP-211ENST00000492485 TAS2R14Q9NYV8 317 aa13.25□□□□□ -0.29
TRIOBP-211ENST00000492485 SUGT1Q9Y2Z0 365 aa13.25□□□□□ -0.29
TRIOBP-211ENST00000492485 H7C0C1 242 aa13.25□□□□□ -0.29
TRIOBP-211ENST00000492485 KRT1P04264 644 aa13.25□□□□□ -0.29
TRIOBP-211ENST00000492485 ATP5OP48047 213 aa13.25□□□□□ -0.29
TRIOBP-211ENST00000492485 GPSM2P81274 684 aa13.25□□□□□ -0.29
TRIOBP-211ENST00000492485 EPM2AIP1Q7L775 607 aaPredicted RBP13.25□□□□□ -0.29
TRIOBP-211ENST00000492485 USP37Q86T82 979 aa13.25□□□□□ -0.29
TRIOBP-211ENST00000492485 SPATS2Q86XZ4 545 aaKnown RBP13.25□□□□□ -0.29
TRIOBP-211ENST00000492485 SULF1Q8IWU6 871 aa13.25□□□□□ -0.29
TRIOBP-211ENST00000492485 PIP4K2CQ8TBX8 421 aa13.25□□□□□ -0.29
TRIOBP-211ENST00000492485 AENQ8WTP8 325 aaKnown RBP13.25□□□□□ -0.29
TRIOBP-211ENST00000492485 EIF2AK1Q9BQI3 630 aaKnown RBP13.25□□□□□ -0.29
TRIOBP-211ENST00000492485 ACTR5Q9H9F9 607 aaPredicted RBP13.25□□□□□ -0.29
TRIOBP-211ENST00000492485 SPATS2LQ9NUQ6 558 aaKnown RBP13.25□□□□□ -0.29
TRIOBP-211ENST00000492485 LEMD3Q9Y2U8 911 aa13.25□□□□□ -0.29
TRIOBP-211ENST00000492485 CCDC188H7C350 402 aa13.24□□□□□ -0.29
TRIOBP-211ENST00000492485 BMP3P12645 472 aa13.24□□□□□ -0.29
TRIOBP-211ENST00000492485 RWDD2BP57060 319 aa13.24□□□□□ -0.29
TRIOBP-211ENST00000492485 KDSRQ06136 332 aa13.24□□□□□ -0.29
TRIOBP-211ENST00000492485 EML3Q32P44 896 aa13.24□□□□□ -0.29
TRIOBP-211ENST00000492485 GLE1Q53GS7 698 aaKnown RBP13.24□□□□□ -0.29
TRIOBP-211ENST00000492485 CAPRIN2Q6IMN6 1127 aaKnown RBP13.24□□□□□ -0.29
TRIOBP-211ENST00000492485 TRPM8Q7Z2W7 1104 aa13.24□□□□□ -0.29
TRIOBP-211ENST00000492485 GSDMBQ8TAX9 411 aa13.24□□□□□ -0.29
TRIOBP-211ENST00000492485 SCFD1Q8WVM8 642 aa13.24□□□□□ -0.29
TRIOBP-211ENST00000492485 CFAP36Q96G28 342 aa13.24□□□□□ -0.29
TRIOBP-211ENST00000492485 SGSM3Q96HU1 749 aa13.24□□□□□ -0.29
TRIOBP-211ENST00000492485 FBXO28Q9NVF7 368 aa13.24□□□□□ -0.29
TRIOBP-211ENST00000492485 RAB20Q9NX57 234 aa13.24□□□□□ -0.29
TRIOBP-211ENST00000492485 NR2E1Q9Y466 385 aa13.24□□□□□ -0.29
TRIOBP-211ENST00000492485 MYH10P35580 1976 aa13.24□□□□□ -0.29
TRIOBP-211ENST00000492485 CFLARO15519 480 aa13.24□□□□□ -0.29
TRIOBP-211ENST00000492485 CAMTA2O94983 1202 aa13.24□□□□□ -0.29
TRIOBP-211ENST00000492485 MYL1P05976 194 aa13.24□□□□□ -0.29
TRIOBP-211ENST00000492485 PIK3CAP42336 1068 aa13.24□□□□□ -0.29
TRIOBP-211ENST00000492485 ZNF844Q08AG5 666 aa13.24□□□□□ -0.29
TRIOBP-211ENST00000492485 GPS1Q13098 491 aa13.24□□□□□ -0.29
TRIOBP-211ENST00000492485 SMTNL2Q2TAL5 461 aa13.24□□□□□ -0.29
TRIOBP-211ENST00000492485 C6orf118Q5T5N4 469 aa13.24□□□□□ -0.29
TRIOBP-211ENST00000492485 NXNQ6DKJ4 435 aa13.24□□□□□ -0.29
TRIOBP-211ENST00000492485 RCSD1Q6JBY9 416 aa13.24□□□□□ -0.29
TRIOBP-211ENST00000492485 KRT35Q92764 455 aa13.24□□□□□ -0.29
TRIOBP-211ENST00000492485 MAGEF1Q9HAY2 307 aa13.24□□□□□ -0.29
TRIOBP-211ENST00000492485 ABCF3Q9NUQ8 709 aa13.24□□□□□ -0.29
TRIOBP-211ENST00000492485 SEPT9Q9UHD8 586 aaPredicted RBP13.24□□□□□ -0.29
TRIOBP-211ENST00000492485 ABCA9Q8IUA7 1624 aa13.24□□□□□ -0.29
TRIOBP-211ENST00000492485 ORC4O43929 436 aa13.24□□□□□ -0.29
TRIOBP-211ENST00000492485 ANP32DO95626 131 aa13.24□□□□□ -0.29
TRIOBP-211ENST00000492485 SH3RF1Q7Z6J0 888 aa13.24□□□□□ -0.29
TRIOBP-211ENST00000492485 TPCN2Q8NHX9 752 aa13.24□□□□□ -0.29
TRIOBP-211ENST00000492485 JMJD4Q9H9V9 463 aa13.24□□□□□ -0.29
TRIOBP-211ENST00000492485 KIF9Q9HAQ2 790 aa13.24□□□□□ -0.29
TRIOBP-211ENST00000492485 PPARGC1AQ9UBK2 798 aaKnown RBP13.24□□□□□ -0.29
TRIOBP-211ENST00000492485 HAO1Q9UJM8 370 aa13.24□□□□□ -0.29
TRIOBP-211ENST00000492485 CIB2O75838 187 aa13.23□□□□□ -0.29
TRIOBP-211ENST00000492485 KRT10P13645 584 aa13.23□□□□□ -0.29
TRIOBP-211ENST00000492485 FGFR2P21802 821 aa13.23□□□□□ -0.29
TRIOBP-211ENST00000492485 PPATQ06203 517 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 1046.2 ms