RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 RTN4RL1Q86UN2 441 aaPredicted RBP12.25□□□□□ -0.45
CPSF7-212ENST00000489728 GPBP1Q86WP2 473 aa12.25□□□□□ -0.45
CPSF7-212ENST00000489728 DAW1Q8N136 415 aa12.25□□□□□ -0.45
CPSF7-212ENST00000489728 DEPTORQ8TB45 409 aa12.25□□□□□ -0.45
CPSF7-212ENST00000489728 LEO1Q8WVC0 666 aaPredicted RBP12.25□□□□□ -0.45
CPSF7-212ENST00000489728 SPIRE2Q8WWL2 714 aa12.25□□□□□ -0.45
CPSF7-212ENST00000489728 TIFAQ96CG3 184 aa12.25□□□□□ -0.45
CPSF7-212ENST00000489728 LRCH3Q96II8 777 aa12.25□□□□□ -0.45
CPSF7-212ENST00000489728 NTPCRQ9BSD7 190 aaKnown RBP12.25□□□□□ -0.45
CPSF7-212ENST00000489728 ZBED2Q9BTP6 218 aa12.25□□□□□ -0.45
CPSF7-212ENST00000489728 LRRC27Q9C0I9 530 aa12.25□□□□□ -0.45
CPSF7-212ENST00000489728 PRMT7Q9NVM4 692 aaPredicted RBP12.25□□□□□ -0.45
CPSF7-212ENST00000489728 TMEM161AQ9NX61 479 aa12.25□□□□□ -0.45
CPSF7-212ENST00000489728 FAM13BQ9NYF5 915 aa12.25□□□□□ -0.45
CPSF7-212ENST00000489728 LARSQ9P2J5 1176 aaKnown RBP12.25□□□□□ -0.45
CPSF7-212ENST00000489728 PCDHA7Q9UN72 937 aa12.25□□□□□ -0.45
CPSF7-212ENST00000489728 RBM19Q9Y4C8 960 aaKnown RBP12.25□□□□□ -0.45
CPSF7-212ENST00000489728 A0A0U1RQF3 1178 aa12.24□□□□□ -0.45
CPSF7-212ENST00000489728 GRXCR1A8MXD5 290 aa12.24□□□□□ -0.45
CPSF7-212ENST00000489728 H0YCG3 227 aa12.24□□□□□ -0.45
CPSF7-212ENST00000489728 INO80B-WBP1J3KQ70 363 aa12.24□□□□□ -0.45
CPSF7-212ENST00000489728 MGEA5O60502 916 aa12.24□□□□□ -0.45
CPSF7-212ENST00000489728 EOMESO95936 686 aa12.24□□□□□ -0.45
CPSF7-212ENST00000489728 SSBP05455 408 aaKnown RBP eCLIP12.24□□□□□ -0.45
CPSF7-212ENST00000489728 PLS3P13797 630 aa12.24□□□□□ -0.45
CPSF7-212ENST00000489728 NCLP19338 710 aaKnown RBP12.24□□□□□ -0.45
CPSF7-212ENST00000489728 ZNF131P52739 623 aa12.24□□□□□ -0.45
CPSF7-212ENST00000489728 FOXD4L6Q3SYB3 417 aaPredicted RBP12.24□□□□□ -0.45
CPSF7-212ENST00000489728 NAALADL2Q58DX5 795 aa12.24□□□□□ -0.45
CPSF7-212ENST00000489728 ZNF697Q5TEC3 545 aa12.24□□□□□ -0.45
CPSF7-212ENST00000489728 RESP18Q5W5W9 173 aa12.24□□□□□ -0.45
CPSF7-212ENST00000489728 ADALQ6DHV7 355 aa12.24□□□□□ -0.45
CPSF7-212ENST00000489728 NOTUMQ6P988 496 aa12.24□□□□□ -0.45
CPSF7-212ENST00000489728 SHC4Q6S5L8 630 aa12.24□□□□□ -0.45
CPSF7-212ENST00000489728 FOXD4L3Q6VB84 417 aaPredicted RBP12.24□□□□□ -0.45
CPSF7-212ENST00000489728 SV2BQ7L1I2 683 aa12.24□□□□□ -0.45
CPSF7-212ENST00000489728 MAEAQ7L5Y9 396 aa12.24□□□□□ -0.45
CPSF7-212ENST00000489728 IQUBQ8NA54 791 aa12.24□□□□□ -0.45
CPSF7-212ENST00000489728 ZNF668Q96K58 619 aaPredicted RBP12.24□□□□□ -0.45
CPSF7-212ENST00000489728 YME1L1Q96TA2 773 aa12.24□□□□□ -0.45
CPSF7-212ENST00000489728 PLIN2Q99541 437 aa12.24□□□□□ -0.45
CPSF7-212ENST00000489728 CCDC113Q9H0I3 377 aa12.24□□□□□ -0.45
CPSF7-212ENST00000489728 FZD8Q9H461 694 aa12.24□□□□□ -0.45
CPSF7-212ENST00000489728 MINDY3Q9H8M7 445 aa12.24□□□□□ -0.45
CPSF7-212ENST00000489728 SLC28A3Q9HAS3 691 aa12.24□□□□□ -0.45
CPSF7-212ENST00000489728 CNTNAP2Q9UHC6 1331 aa12.24□□□□□ -0.45
CPSF7-212ENST00000489728 PIN4Q9Y237 131 aaKnown RBP12.24□□□□□ -0.45
CPSF7-212ENST00000489728 ZMYM2Q9UBW7 1377 aa12.23□□□□□ -0.45
CPSF7-212ENST00000489728 ADGRA3Q8IWK6 1321 aa12.23□□□□□ -0.45
CPSF7-212ENST00000489728 TSPAN1O60635 241 aa12.23□□□□□ -0.45
CPSF7-212ENST00000489728 ZNF623O75123 536 aa12.23□□□□□ -0.45
CPSF7-212ENST00000489728 DGKIO75912 1065 aa12.23□□□□□ -0.45
CPSF7-212ENST00000489728 CMA1P23946 247 aa12.23□□□□□ -0.45
CPSF7-212ENST00000489728 HOXA11P31270 313 aaPredicted RBP12.23□□□□□ -0.45
CPSF7-212ENST00000489728 NPTX2P47972 431 aa12.23□□□□□ -0.45
CPSF7-212ENST00000489728 SMTNP53814 917 aa12.23□□□□□ -0.45
CPSF7-212ENST00000489728 MCM6Q14566 821 aa12.23□□□□□ -0.45
CPSF7-212ENST00000489728 E2F4Q16254 413 aa12.23□□□□□ -0.45
CPSF7-212ENST00000489728 MAPK6Q16659 721 aa12.23□□□□□ -0.45
CPSF7-212ENST00000489728 AMHR2Q16671 573 aa12.23□□□□□ -0.45
CPSF7-212ENST00000489728 ARSHQ5FYA8 562 aa12.23□□□□□ -0.45
CPSF7-212ENST00000489728 ECHDC2Q86YB7 292 aa12.23□□□□□ -0.45
CPSF7-212ENST00000489728 CMTR2Q8IYT2 770 aaKnown RBP12.23□□□□□ -0.45
CPSF7-212ENST00000489728 SLC17A8Q8NDX2 589 aa12.23□□□□□ -0.45
CPSF7-212ENST00000489728 CNNM3Q8NE01 707 aa12.23□□□□□ -0.45
CPSF7-212ENST00000489728 LRRC15Q8TF66 581 aa12.23□□□□□ -0.45
CPSF7-212ENST00000489728 BSNDQ8WZ55 320 aa12.23□□□□□ -0.45
CPSF7-212ENST00000489728 ZNF689Q96CS4 500 aaPredicted RBP12.23□□□□□ -0.45
CPSF7-212ENST00000489728 SAMD11Q96NU1 681 aa12.23□□□□□ -0.45
CPSF7-212ENST00000489728 REEP2Q9BRK0 252 aa12.23□□□□□ -0.45
CPSF7-212ENST00000489728 TNMDQ9H2S6 317 aa12.23□□□□□ -0.45
CPSF7-212ENST00000489728 TMEM134Q9H6X4 195 aa12.23□□□□□ -0.45
CPSF7-212ENST00000489728 RC3H2Q9HBD1 1191 aaKnown RBP12.23□□□□□ -0.45
CPSF7-212ENST00000489728 PARVGQ9HBI0 331 aa12.23□□□□□ -0.45
CPSF7-212ENST00000489728 CHMP5Q9NZZ3 219 aa12.23□□□□□ -0.45
CPSF7-212ENST00000489728 ARHGAP28Q9P2N2 729 aa12.23□□□□□ -0.45
CPSF7-212ENST00000489728 SEL1LQ9UBV2 794 aa12.23□□□□□ -0.45
CPSF7-212ENST00000489728 USP25Q9UHP3 1055 aa12.23□□□□□ -0.45
CPSF7-212ENST00000489728 LRFN2Q9ULH4 789 aa12.23□□□□□ -0.45
CPSF7-212ENST00000489728 YBX2Q9Y2T7 364 aaKnown RBP12.23□□□□□ -0.45
CPSF7-212ENST00000489728 PCDHB7Q9Y5E2 793 aa12.23□□□□□ -0.45
CPSF7-212ENST00000489728 MYH11P35749 1972 aa12.22□□□□□ -0.45
CPSF7-212ENST00000489728 A0A087X0B3 334 aa12.22□□□□□ -0.45
CPSF7-212ENST00000489728 FAM237AA0A1B0GTK4 181 aa12.22□□□□□ -0.45
CPSF7-212ENST00000489728 A0A1W2PQ27 194 aa12.22□□□□□ -0.45
CPSF7-212ENST00000489728 A0A1W2PQ64 194 aa12.22□□□□□ -0.45
CPSF7-212ENST00000489728 A0A1W2PQD8 194 aa12.22□□□□□ -0.45
CPSF7-212ENST00000489728 ACKR2O00590 384 aa12.22□□□□□ -0.45
CPSF7-212ENST00000489728 TBCAO75347 108 aaKnown RBP12.22□□□□□ -0.45
CPSF7-212ENST00000489728 CSDE1O75534 798 aaKnown RBP12.22□□□□□ -0.45
CPSF7-212ENST00000489728 KRT18P05783 430 aaKnown RBP12.22□□□□□ -0.45
CPSF7-212ENST00000489728 CA3P07451 260 aa12.22□□□□□ -0.45
CPSF7-212ENST00000489728 FGFR4P22455 802 aa12.22□□□□□ -0.45
CPSF7-212ENST00000489728 PBX2P40425 430 aa12.22□□□□□ -0.45
CPSF7-212ENST00000489728 RABGGTBP53611 331 aa12.22□□□□□ -0.45
CPSF7-212ENST00000489728 PEX3P56589 373 aa12.22□□□□□ -0.45
CPSF7-212ENST00000489728 AMPD3Q01432 767 aa12.22□□□□□ -0.45
CPSF7-212ENST00000489728 PPP2R2DQ66LE6 453 aa12.22□□□□□ -0.45
CPSF7-212ENST00000489728 TWF2Q6IBS0 349 aaKnown RBP12.22□□□□□ -0.45
CPSF7-212ENST00000489728 CNNM4Q6P4Q7 775 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms