RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 KRT17Q04695 432 aa13.31□□□□□ -0.28
CCHCR1-215ENST00000488920 ZNF174Q15697 407 aa13.31□□□□□ -0.28
CCHCR1-215ENST00000488920 PLPP4Q5VZY2 271 aa13.31□□□□□ -0.28
CCHCR1-215ENST00000488920 PDE12Q6L8Q7 609 aaKnown RBP13.31□□□□□ -0.28
CCHCR1-215ENST00000488920 SRGAP1Q7Z6B7 1085 aa13.31□□□□□ -0.28
CCHCR1-215ENST00000488920 FERMT3Q86UX7 667 aa13.31□□□□□ -0.28
CCHCR1-215ENST00000488920 RNF149Q8NC42 400 aa13.31□□□□□ -0.28
CCHCR1-215ENST00000488920 PIGOQ8TEQ8 1089 aa13.31□□□□□ -0.28
CCHCR1-215ENST00000488920 MSLNLQ96KJ4 702 aa13.31□□□□□ -0.28
CCHCR1-215ENST00000488920 MTRQ99707 1265 aa13.31□□□□□ -0.28
CCHCR1-215ENST00000488920 TCF25Q9BQ70 676 aa13.31□□□□□ -0.28
CCHCR1-215ENST00000488920 XPNPEP1Q9NQW7 623 aa13.31□□□□□ -0.28
CCHCR1-215ENST00000488920 ANKEF1Q9NU02 776 aa13.31□□□□□ -0.28
CCHCR1-215ENST00000488920 AGPAT5Q9NUQ2 364 aa13.31□□□□□ -0.28
CCHCR1-215ENST00000488920 FAM105AQ9NUU6 356 aa13.31□□□□□ -0.28
CCHCR1-215ENST00000488920 RAPGEFL1Q9UHV5 662 aa13.31□□□□□ -0.28
CCHCR1-215ENST00000488920 BARX2Q9UMQ3 279 aaPredicted RBP13.31□□□□□ -0.28
CCHCR1-215ENST00000488920 LZTS1Q9Y250 596 aa13.31□□□□□ -0.28
CCHCR1-215ENST00000488920 INPP5FQ9Y2H2 1132 aa13.31□□□□□ -0.28
CCHCR1-215ENST00000488920 PCDHB2Q9Y5E7 798 aa13.31□□□□□ -0.28
CCHCR1-215ENST00000488920 NCOR1O75376 2440 aa13.31□□□□□ -0.28
CCHCR1-215ENST00000488920 POTEMA6NI47 508 aa13.3□□□□□ -0.28
CCHCR1-215ENST00000488920 NT5C1B-RDH14C9J2C7 533 aa13.3□□□□□ -0.28
CCHCR1-215ENST00000488920 PI4K2BG5E9Z4 385 aa13.3□□□□□ -0.28
CCHCR1-215ENST00000488920 GAS2O43903 313 aaKnown RBP13.3□□□□□ -0.28
CCHCR1-215ENST00000488920 ZNF623O75123 536 aa13.3□□□□□ -0.28
CCHCR1-215ENST00000488920 OFD1O75665 1012 aa13.3□□□□□ -0.28
CCHCR1-215ENST00000488920 LYPLA2O95372 231 aa13.3□□□□□ -0.28
CCHCR1-215ENST00000488920 GLP2RO95838 553 aa13.3□□□□□ -0.28
CCHCR1-215ENST00000488920 HOXA11P31270 313 aaPredicted RBP13.3□□□□□ -0.28
CCHCR1-215ENST00000488920 PPM1AP35813 382 aa13.3□□□□□ -0.28
CCHCR1-215ENST00000488920 ALDH7A1P49419 539 aaKnown RBP13.3□□□□□ -0.28
CCHCR1-215ENST00000488920 BCAR1P56945 870 aa13.3□□□□□ -0.28
CCHCR1-215ENST00000488920 ZP2Q05996 745 aa13.3□□□□□ -0.28
CCHCR1-215ENST00000488920 SMAD4Q13485 552 aaKnown RBP13.3□□□□□ -0.28
CCHCR1-215ENST00000488920 SMAD2Q15796 467 aaKnown RBP13.3□□□□□ -0.28
CCHCR1-215ENST00000488920 GLB1LQ6UWU2 654 aa13.3□□□□□ -0.28
CCHCR1-215ENST00000488920 TMC7Q7Z402 723 aa13.3□□□□□ -0.28
CCHCR1-215ENST00000488920 ADHFE1Q8IWW8 467 aa13.3□□□□□ -0.28
CCHCR1-215ENST00000488920 SLC39A11Q8N1S5 342 aa13.3□□□□□ -0.28
CCHCR1-215ENST00000488920 FAM184AQ8NB25 1140 aa13.3□□□□□ -0.28
CCHCR1-215ENST00000488920 FBXO18Q8NFZ0 1043 aa13.3□□□□□ -0.28
CCHCR1-215ENST00000488920 VN1R2Q8NFZ6 395 aa13.3□□□□□ -0.28
CCHCR1-215ENST00000488920 MRPL9Q9BYD2 267 aaKnown RBP13.3□□□□□ -0.28
CCHCR1-215ENST00000488920 ENTPD7Q9NQZ7 604 aa13.3□□□□□ -0.28
CCHCR1-215ENST00000488920 SH2B1Q9NRF2 756 aaPredicted RBP13.3□□□□□ -0.28
CCHCR1-215ENST00000488920 PRKAG3Q9UGI9 489 aa13.3□□□□□ -0.28
CCHCR1-215ENST00000488920 FAM86C2PA6NEL3 165 aa13.29□□□□□ -0.28
CCHCR1-215ENST00000488920 HIDE1A8MVS5 230 aa13.29□□□□□ -0.28
CCHCR1-215ENST00000488920 ZC3H11AO75152 810 aaKnown RBP eCLIP13.29□□□□□ -0.28
CCHCR1-215ENST00000488920 SPATA31C1P0DKV0 1188 aa13.29□□□□□ -0.28
CCHCR1-215ENST00000488920 TECP42680 631 aa13.29□□□□□ -0.28
CCHCR1-215ENST00000488920 RBM25P49756 843 aaKnown RBP13.29□□□□□ -0.28
CCHCR1-215ENST00000488920 RARRES1P49788 294 aa13.29□□□□□ -0.28
CCHCR1-215ENST00000488920 RAB27AP51159 221 aa13.29□□□□□ -0.28
CCHCR1-215ENST00000488920 HMGN5P82970 282 aaKnown RBP13.29□□□□□ -0.28
CCHCR1-215ENST00000488920 GNL2Q13823 731 aaKnown RBP13.29□□□□□ -0.28
CCHCR1-215ENST00000488920 MXD4Q14582 209 aaPredicted RBP13.29□□□□□ -0.28
CCHCR1-215ENST00000488920 DUSP6Q16828 381 aa13.29□□□□□ -0.28
CCHCR1-215ENST00000488920 NOMO2Q5JPE7 1267 aa13.29□□□□□ -0.28
CCHCR1-215ENST00000488920 UBXN11Q5T124 520 aa13.29□□□□□ -0.28
CCHCR1-215ENST00000488920 ASAP3Q8TDY4 903 aa13.29□□□□□ -0.28
CCHCR1-215ENST00000488920 PGBD4Q96DM1 585 aa13.29□□□□□ -0.28
CCHCR1-215ENST00000488920 CCDC43Q96MW1 224 aaKnown RBP13.29□□□□□ -0.28
CCHCR1-215ENST00000488920 FOXP1Q9H334 677 aaPredicted RBP13.29□□□□□ -0.28
CCHCR1-215ENST00000488920 NGRNQ9NPE2 291 aaKnown RBP13.29□□□□□ -0.28
CCHCR1-215ENST00000488920 WDR81Q562E7 1941 aa13.29□□□□□ -0.28
CCHCR1-215ENST00000488920 FNDC1Q4ZHG4 1894 aaPredicted RBP13.28□□□□□ -0.28
CCHCR1-215ENST00000488920 C19orf67A6NJJ6 358 aa13.28□□□□□ -0.28
CCHCR1-215ENST00000488920 MED24O75448 989 aa13.28□□□□□ -0.28
CCHCR1-215ENST00000488920 DGAT1O75907 488 aa13.28□□□□□ -0.28
CCHCR1-215ENST00000488920 ERLIN2O94905 339 aa13.28□□□□□ -0.28
CCHCR1-215ENST00000488920 EYA4O95677 639 aa13.28□□□□□ -0.28
CCHCR1-215ENST00000488920 XRCC6P12956 609 aaKnown RBP eCLIP13.28□□□□□ -0.28
CCHCR1-215ENST00000488920 ARL2P36404 184 aa13.28□□□□□ -0.28
CCHCR1-215ENST00000488920 AFF1P51825 1210 aaKnown RBP13.28□□□□□ -0.28
CCHCR1-215ENST00000488920 PTENP60484 403 aa13.28□□□□□ -0.28
CCHCR1-215ENST00000488920 RNASELQ05823 741 aaKnown RBP13.28□□□□□ -0.28
CCHCR1-215ENST00000488920 COASYQ13057 564 aa13.28□□□□□ -0.28
CCHCR1-215ENST00000488920 TFDP1Q14186 410 aa13.28□□□□□ -0.28
CCHCR1-215ENST00000488920 TMEM31Q5JXX7 168 aa13.28□□□□□ -0.28
CCHCR1-215ENST00000488920 LLGL2Q6P1M3 1020 aa13.28□□□□□ -0.28
CCHCR1-215ENST00000488920 AGMOQ6ZNB7 445 aa13.28□□□□□ -0.28
CCHCR1-215ENST00000488920 MAEAQ7L5Y9 396 aa13.28□□□□□ -0.28
CCHCR1-215ENST00000488920 MRPL10Q7Z7H8 261 aaKnown RBP13.28□□□□□ -0.28
CCHCR1-215ENST00000488920 CATSPER3Q86XQ3 398 aa13.28□□□□□ -0.28
CCHCR1-215ENST00000488920 NOSTRINQ8IVI9 506 aa13.28□□□□□ -0.28
CCHCR1-215ENST00000488920 CDCA3Q99618 268 aaPredicted RBP13.28□□□□□ -0.28
CCHCR1-215ENST00000488920 LRFN3Q9BTN0 628 aa13.28□□□□□ -0.28
CCHCR1-215ENST00000488920 GBP3Q9H0R5 595 aa13.28□□□□□ -0.28
CCHCR1-215ENST00000488920 NRDE2Q9H7Z3 1164 aa13.28□□□□□ -0.28
CCHCR1-215ENST00000488920 TBC1D13Q9NVG8 400 aa13.28□□□□□ -0.28
CCHCR1-215ENST00000488920 KIAA1671Q9BY89 1806 aa13.27□□□□□ -0.28
CCHCR1-215ENST00000488920 INO80B-WBP1J3KQ70 363 aa13.27□□□□□ -0.29
CCHCR1-215ENST00000488920 TSPAN1O60635 241 aa13.27□□□□□ -0.29
CCHCR1-215ENST00000488920 USO1O60763 962 aaKnown RBP13.27□□□□□ -0.29
CCHCR1-215ENST00000488920 CXCL14O95715 111 aa13.27□□□□□ -0.29
CCHCR1-215ENST00000488920 GALTP07902 379 aa13.27□□□□□ -0.29
CCHCR1-215ENST00000488920 OR52Z1P0C646 297 aa13.27□□□□□ -0.29
CCHCR1-215ENST00000488920 GLRA2P23416 452 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms