RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 SPATA6Q9NWH7 488 aaPredicted RBP8.66□□□□□ -1.02
PDPN-205ENST00000487038 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.66□□□□□ -1.02
PDPN-205ENST00000487038 DLGAP2Q9P1A6 1054 aa8.66□□□□□ -1.02
PDPN-205ENST00000487038 GMEB2Q9UKD1 530 aa8.66□□□□□ -1.02
PDPN-205ENST00000487038 INPP5FQ9Y2H2 1132 aa8.66□□□□□ -1.02
PDPN-205ENST00000487038 MAFBQ9Y5Q3 323 aaPredicted RBP8.66□□□□□ -1.02
PDPN-205ENST00000487038 IGF2RP11717 2491 aa8.66□□□□□ -1.02
PDPN-205ENST00000487038 RALGAPA1Q6GYQ0 2036 aa8.66□□□□□ -1.02
PDPN-205ENST00000487038 ZZEF1O43149 2961 aa8.66□□□□□ -1.02
PDPN-205ENST00000487038 CCDC195A0A1B0GUA6 201 aa8.65□□□□□ -1.02
PDPN-205ENST00000487038 hCG_1984214I3L0E3 225 aa8.65□□□□□ -1.02
PDPN-205ENST00000487038 MEIS1O00470 390 aa8.65□□□□□ -1.02
PDPN-205ENST00000487038 CCNE2O96020 404 aa8.65□□□□□ -1.02
PDPN-205ENST00000487038 SSBP05455 408 aaKnown RBP eCLIP8.65□□□□□ -1.02
PDPN-205ENST00000487038 GALTP07902 379 aa8.65□□□□□ -1.02
PDPN-205ENST00000487038 CNPP09543 421 aaKnown RBP8.65□□□□□ -1.02
PDPN-205ENST00000487038 DARSP14868 501 aaKnown RBP8.65□□□□□ -1.02
PDPN-205ENST00000487038 SREBF1P36956 1147 aa8.65□□□□□ -1.02
PDPN-205ENST00000487038 ADCY7P51828 1080 aa8.65□□□□□ -1.02
PDPN-205ENST00000487038 NOMO2Q5JPE7 1267 aa8.65□□□□□ -1.02
PDPN-205ENST00000487038 ZNF746Q6NUN9 644 aaPredicted RBP8.65□□□□□ -1.02
PDPN-205ENST00000487038 GET4Q7L5D6 327 aaPredicted RBP8.65□□□□□ -1.02
PDPN-205ENST00000487038 TRMT1LQ7Z2T5 733 aaKnown RBP8.65□□□□□ -1.02
PDPN-205ENST00000487038 LRRC71Q8N4P6 559 aa8.65□□□□□ -1.02
PDPN-205ENST00000487038 SRBD1Q8N5C6 995 aaKnown RBP8.65□□□□□ -1.02
PDPN-205ENST00000487038 ZNF713Q8N859 430 aaPredicted RBP8.65□□□□□ -1.02
PDPN-205ENST00000487038 IGDCC4Q8TDY8 1250 aa8.65□□□□□ -1.02
PDPN-205ENST00000487038 SMG7Q92540 1137 aaKnown RBP8.65□□□□□ -1.02
PDPN-205ENST00000487038 PGBD4Q96DM1 585 aa8.65□□□□□ -1.02
PDPN-205ENST00000487038 PGBD1Q96JS3 809 aa8.65□□□□□ -1.02
PDPN-205ENST00000487038 FAM193BQ96PV7 902 aaPredicted RBP8.65□□□□□ -1.02
PDPN-205ENST00000487038 TMEM175Q9BSA9 504 aa8.65□□□□□ -1.02
PDPN-205ENST00000487038 TRAIPQ9BWF2 469 aa8.65□□□□□ -1.02
PDPN-205ENST00000487038 GCOM2Q9BZD3 368 aaPredicted RBP8.65□□□□□ -1.02
PDPN-205ENST00000487038 INO80BQ9C086 356 aaPredicted RBP8.65□□□□□ -1.02
PDPN-205ENST00000487038 ADAMTS10Q9H324 1103 aa8.65□□□□□ -1.02
PDPN-205ENST00000487038 NRDE2Q9H7Z3 1164 aa8.65□□□□□ -1.02
PDPN-205ENST00000487038 RIC8AQ9NPQ8 531 aa8.65□□□□□ -1.02
PDPN-205ENST00000487038 USP18Q9UMW8 372 aa8.65□□□□□ -1.02
PDPN-205ENST00000487038 SMG5Q9UPR3 1016 aaKnown RBP8.65□□□□□ -1.02
PDPN-205ENST00000487038 PIN4Q9Y237 131 aaKnown RBP8.65□□□□□ -1.02
PDPN-205ENST00000487038 SAMM50Q9Y512 469 aa8.65□□□□□ -1.02
PDPN-205ENST00000487038 ZFP37Q9Y6Q3 630 aaPredicted RBP8.65□□□□□ -1.02
PDPN-205ENST00000487038 SETXQ7Z333 2677 aaKnown RBP8.65□□□□□ -1.03
PDPN-205ENST00000487038 FRYQ5TBA9 3013 aa8.64□□□□□ -1.03
PDPN-205ENST00000487038 PDCD11Q14690 1871 aaKnown RBP8.64□□□□□ -1.03
PDPN-205ENST00000487038 ARID2Q68CP9 1835 aa8.64□□□□□ -1.03
PDPN-205ENST00000487038 KANSL1LA0AUZ9 987 aa8.64□□□□□ -1.03
PDPN-205ENST00000487038 IPO5O00410 1097 aaKnown RBP8.64□□□□□ -1.03
PDPN-205ENST00000487038 C2CD2LO14523 706 aa8.64□□□□□ -1.03
PDPN-205ENST00000487038 N4BP1O75113 896 aaKnown RBP8.64□□□□□ -1.03
PDPN-205ENST00000487038 SOD2P04179 222 aa8.64□□□□□ -1.03
PDPN-205ENST00000487038 ATP4AP20648 1035 aa8.64□□□□□ -1.03
PDPN-205ENST00000487038 SLC11A1P49279 550 aa8.64□□□□□ -1.03
PDPN-205ENST00000487038 AK2P54819 239 aa8.64□□□□□ -1.03
PDPN-205ENST00000487038 STARD6P59095 220 aa8.64□□□□□ -1.03
PDPN-205ENST00000487038 PRKCQQ04759 706 aa8.64□□□□□ -1.03
PDPN-205ENST00000487038 B4GALNT3Q6L9W6 998 aa8.64□□□□□ -1.03
PDPN-205ENST00000487038 CHD1LQ86WJ1 897 aa8.64□□□□□ -1.03
PDPN-205ENST00000487038 PLA2G4DQ86XP0 818 aa8.64□□□□□ -1.03
PDPN-205ENST00000487038 PLEKHM2Q8IWE5 1019 aa8.64□□□□□ -1.03
PDPN-205ENST00000487038 MB21D2Q8IYB1 491 aaPredicted RBP8.64□□□□□ -1.03
PDPN-205ENST00000487038 CMTR1Q8N1G2 835 aaKnown RBP8.64□□□□□ -1.03
PDPN-205ENST00000487038 LINC01465Q8N7H1 131 aa8.64□□□□□ -1.03
PDPN-205ENST00000487038 HDAC7Q8WUI4 952 aa8.64□□□□□ -1.03
PDPN-205ENST00000487038 TMEM87BQ96K49 555 aa8.64□□□□□ -1.03
PDPN-205ENST00000487038 ZNF577Q9BSK1 485 aa8.64□□□□□ -1.03
PDPN-205ENST00000487038 HERC2P3Q9BVR0 1158 aa8.64□□□□□ -1.03
PDPN-205ENST00000487038 FOXQ1Q9C009 403 aa8.64□□□□□ -1.03
PDPN-205ENST00000487038 EPC1Q9H2F5 836 aa8.64□□□□□ -1.03
PDPN-205ENST00000487038 NRBP2Q9NSY0 501 aa8.64□□□□□ -1.03
PDPN-205ENST00000487038 FAM105AQ9NUU6 356 aa8.64□□□□□ -1.03
PDPN-205ENST00000487038 KANSL3Q9P2N6 904 aa8.64□□□□□ -1.03
PDPN-205ENST00000487038 GABBR1Q9UBS5 961 aa8.64□□□□□ -1.03
PDPN-205ENST00000487038 DNAJB4Q9UDY4 337 aa8.64□□□□□ -1.03
PDPN-205ENST00000487038 PCDHA10Q9Y5I2 948 aa8.64□□□□□ -1.03
PDPN-205ENST00000487038 SLC12A7Q9Y666 1083 aa8.64□□□□□ -1.03
PDPN-205ENST00000487038 CNTNAP2Q9UHC6 1331 aa8.63□□□□□ -1.03
PDPN-205ENST00000487038 hCG_1642624A0A1W2PR95 340 aa8.63□□□□□ -1.03
PDPN-205ENST00000487038 POTEMA6NI47 508 aa8.63□□□□□ -1.03
PDPN-205ENST00000487038 WDR64B1ANS9 1081 aa8.63□□□□□ -1.03
PDPN-205ENST00000487038 NCAM2O15394 837 aa8.63□□□□□ -1.03
PDPN-205ENST00000487038 PRC1O43663 620 aa8.63□□□□□ -1.03
PDPN-205ENST00000487038 TBC1D4O60343 1298 aa8.63□□□□□ -1.03
PDPN-205ENST00000487038 OATP04181 439 aa8.63□□□□□ -1.03
PDPN-205ENST00000487038 ALDH2P05091 517 aa8.63□□□□□ -1.03
PDPN-205ENST00000487038 LAMP2P13473 410 aa8.63□□□□□ -1.03
PDPN-205ENST00000487038 RXRAP19793 462 aa8.63□□□□□ -1.03
PDPN-205ENST00000487038 FGFR4P22455 802 aa8.63□□□□□ -1.03
PDPN-205ENST00000487038 MCM5P33992 734 aa8.63□□□□□ -1.03
PDPN-205ENST00000487038 GLUD2P49448 558 aa8.63□□□□□ -1.03
PDPN-205ENST00000487038 DNM2P50570 870 aa8.63□□□□□ -1.03
PDPN-205ENST00000487038 ANTXR2P58335 489 aa8.63□□□□□ -1.03
PDPN-205ENST00000487038 PFKPQ01813 784 aa8.63□□□□□ -1.03
PDPN-205ENST00000487038 CREMQ03060 361 aa8.63□□□□□ -1.03
PDPN-205ENST00000487038 CSTF1Q05048 431 aaKnown RBP8.63□□□□□ -1.03
PDPN-205ENST00000487038 DMWDQ09019 674 aa8.63□□□□□ -1.03
PDPN-205ENST00000487038 HTR4Q13639 388 aa8.63□□□□□ -1.03
PDPN-205ENST00000487038 UBXN2BQ14CS0 331 aa8.63□□□□□ -1.03
PDPN-205ENST00000487038 WWC2Q6AWC2 1192 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms