RNA–Protein interactions for RNA: ENST00000479199.1

GCA-208, Transcript of grancalcin, humanhuman

TSL 2

Gene GCA, Length 597 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCA-208ENST00000479199 KSR1Q8IVT5 923 aa13.49□□□□□ -0.25
GCA-208ENST00000479199 TMEM105Q8N8V8 129 aa13.49□□□□□ -0.25
GCA-208ENST00000479199 RDM1Q8NG50 284 aa13.49□□□□□ -0.25
GCA-208ENST00000479199 IGSF21Q96ID5 467 aa13.49□□□□□ -0.25
GCA-208ENST00000479199 NLRP4Q96MN2 994 aa13.49□□□□□ -0.25
GCA-208ENST00000479199 GBP3Q9H0R5 595 aa13.49□□□□□ -0.25
GCA-208ENST00000479199 NRDE2Q9H7Z3 1164 aa13.49□□□□□ -0.25
GCA-208ENST00000479199 CHST12Q9NRB3 414 aa13.49□□□□□ -0.25
GCA-208ENST00000479199 FAM105AQ9NUU6 356 aa13.49□□□□□ -0.25
GCA-208ENST00000479199 DZANK1Q9NVP4 752 aa13.49□□□□□ -0.25
GCA-208ENST00000479199 DNAJB4Q9UDY4 337 aa13.49□□□□□ -0.25
GCA-208ENST00000479199 PDIA3P30101 505 aaKnown RBP13.48□□□□□ -0.25
GCA-208ENST00000479199 SLC11A1P49279 550 aa13.48□□□□□ -0.25
GCA-208ENST00000479199 PTPN14Q15678 1187 aa13.48□□□□□ -0.25
GCA-208ENST00000479199 NOMO2Q5JPE7 1267 aa13.48□□□□□ -0.25
GCA-208ENST00000479199 GLB1LQ6UWU2 654 aa13.48□□□□□ -0.25
GCA-208ENST00000479199 CATSPER4Q7RTX7 472 aa13.48□□□□□ -0.25
GCA-208ENST00000479199 DDX53Q86TM3 631 aaKnown RBP13.48□□□□□ -0.25
GCA-208ENST00000479199 ZNF410Q86VK4 478 aa13.48□□□□□ -0.25
GCA-208ENST00000479199 UBALD2Q8IYN6 164 aa13.48□□□□□ -0.25
GCA-208ENST00000479199 FBXL16Q8N461 479 aa13.48□□□□□ -0.25
GCA-208ENST00000479199 ETNPPLQ8TBG4 499 aa13.48□□□□□ -0.25
GCA-208ENST00000479199 SLC22A17Q8WUG5 538 aa13.48□□□□□ -0.25
GCA-208ENST00000479199 AIFM3Q96NN9 605 aa13.48□□□□□ -0.25
GCA-208ENST00000479199 TRAIPQ9BWF2 469 aa13.48□□□□□ -0.25
GCA-208ENST00000479199 SH3GLB2Q9NR46 395 aa13.48□□□□□ -0.25
GCA-208ENST00000479199 SUCLA2Q9P2R7 463 aaPredicted RBP13.48□□□□□ -0.25
GCA-208ENST00000479199 DBR1Q9UK59 544 aaKnown RBP13.48□□□□□ -0.25
GCA-208ENST00000479199 PCDHA4Q9UN74 947 aa13.48□□□□□ -0.25
GCA-208ENST00000479199 DDX11L8A8MPP1 907 aa13.47□□□□□ -0.25
GCA-208ENST00000479199 GALR2O43603 387 aaPredicted RBP13.47□□□□□ -0.25
GCA-208ENST00000479199 SLC37A4O43826 429 aa13.47□□□□□ -0.25
GCA-208ENST00000479199 MAFO75444 373 aaPredicted RBP13.47□□□□□ -0.25
GCA-208ENST00000479199 SSBP05455 408 aaKnown RBP eCLIP13.47□□□□□ -0.25
GCA-208ENST00000479199 GALTP07902 379 aa13.47□□□□□ -0.25
GCA-208ENST00000479199 DNM2P50570 870 aa13.47□□□□□ -0.25
GCA-208ENST00000479199 POLGP54098 1239 aaPredicted RBP13.47□□□□□ -0.25
GCA-208ENST00000479199 RNASELQ05823 741 aaKnown RBP13.47□□□□□ -0.25
GCA-208ENST00000479199 TOB2Q14106 344 aaPredicted RBP13.47□□□□□ -0.25
GCA-208ENST00000479199 BMS1Q14692 1282 aaKnown RBP13.47□□□□□ -0.25
GCA-208ENST00000479199 NPY5RQ15761 445 aa13.47□□□□□ -0.25
GCA-208ENST00000479199 TMC5Q6UXY8 1006 aa13.47□□□□□ -0.25
GCA-208ENST00000479199 ANO5Q75V66 913 aa13.47□□□□□ -0.25
GCA-208ENST00000479199 TRIM22Q8IYM9 498 aa13.47□□□□□ -0.25
GCA-208ENST00000479199 TMEM87AQ8NBN3 555 aa13.47□□□□□ -0.25
GCA-208ENST00000479199 BMP2KQ9NSY1 1161 aaPredicted RBP13.47□□□□□ -0.25
GCA-208ENST00000479199 AGPAT5Q9NUQ2 364 aa13.47□□□□□ -0.25
GCA-208ENST00000479199 LIMD1Q9UGP4 676 aa13.47□□□□□ -0.25
GCA-208ENST00000479199 IRAK3Q9Y616 596 aa13.47□□□□□ -0.25
GCA-208ENST00000479199 CYP3A7-CYP3A51PA0A087WV96 503 aa13.46□□□□□ -0.25
GCA-208ENST00000479199 M0R2N6 131 aa13.46□□□□□ -0.25
GCA-208ENST00000479199 EML1O00423 815 aa13.46□□□□□ -0.25
GCA-208ENST00000479199 OFD1O75665 1012 aa13.46□□□□□ -0.25
GCA-208ENST00000479199 SKIP12755 728 aa13.46□□□□□ -0.25
GCA-208ENST00000479199 CYP3A7P24462 503 aa13.46□□□□□ -0.25
GCA-208ENST00000479199 RAB27AP51159 221 aa13.46□□□□□ -0.25
GCA-208ENST00000479199 AFF1P51825 1210 aaKnown RBP13.46□□□□□ -0.25
GCA-208ENST00000479199 EVCP57679 992 aa13.46□□□□□ -0.25
GCA-208ENST00000479199 ATAT1Q5SQI0 421 aa13.46□□□□□ -0.25
GCA-208ENST00000479199 CABP7Q86V35 215 aa13.46□□□□□ -0.25
GCA-208ENST00000479199 ZNF280BQ86YH2 543 aa13.46□□□□□ -0.25
GCA-208ENST00000479199 ZDHHC14Q8IZN3 488 aa13.46□□□□□ -0.25
GCA-208ENST00000479199 BLIDQ8IZY5 108 aa13.46□□□□□ -0.25
GCA-208ENST00000479199 RSPH1Q8WYR4 309 aa13.46□□□□□ -0.25
GCA-208ENST00000479199 MBOAT7Q96N66 472 aa13.46□□□□□ -0.25
GCA-208ENST00000479199 LARP6Q9BRS8 491 aaKnown RBP13.46□□□□□ -0.25
GCA-208ENST00000479199 SFXN1Q9H9B4 322 aa13.46□□□□□ -0.25
GCA-208ENST00000479199 IFT122Q9HBG6 1241 aa13.46□□□□□ -0.25
GCA-208ENST00000479199 PCDHB2Q9Y5E7 798 aa13.46□□□□□ -0.25
GCA-208ENST00000479199 MYH15Q9Y2K3 1946 aa13.46□□□□□ -0.25
GCA-208ENST00000479199 VPS13AQ96RL7 3174 aa13.46□□□□□ -0.26
GCA-208ENST00000479199 MYO15AQ9UKN7 3530 aa13.45□□□□□ -0.26
GCA-208ENST00000479199 SPDYE4A6NLX3 237 aa13.45□□□□□ -0.26
GCA-208ENST00000479199 ZNF623O75123 536 aa13.45□□□□□ -0.26
GCA-208ENST00000479199 DEXIO95424 95 aa13.45□□□□□ -0.26
GCA-208ENST00000479199 NPEPPSP55786 919 aa13.45□□□□□ -0.26
GCA-208ENST00000479199 PSMC5P62195 406 aa13.45□□□□□ -0.26
GCA-208ENST00000479199 CDC42EP1Q00587 391 aa13.45□□□□□ -0.26
GCA-208ENST00000479199 SSRP1Q08945 709 aaKnown RBP13.45□□□□□ -0.26
GCA-208ENST00000479199 GIT2Q14161 759 aa13.45□□□□□ -0.26
GCA-208ENST00000479199 INF2Q27J81 1249 aa13.45□□□□□ -0.26
GCA-208ENST00000479199 MOXD1Q6UVY6 613 aa13.45□□□□□ -0.26
GCA-208ENST00000479199 AGMOQ6ZNB7 445 aa13.45□□□□□ -0.26
GCA-208ENST00000479199 ZNF579Q8NAF0 562 aaKnown RBP13.45□□□□□ -0.26
GCA-208ENST00000479199 DAGLBQ8NCG7 672 aa13.45□□□□□ -0.26
GCA-208ENST00000479199 URGCPQ8TCY9 931 aa13.45□□□□□ -0.26
GCA-208ENST00000479199 SNX27Q96L92 541 aa13.45□□□□□ -0.26
GCA-208ENST00000479199 C22orf23Q9BZE7 217 aa13.45□□□□□ -0.26
GCA-208ENST00000479199 INO80BQ9C086 356 aaPredicted RBP13.45□□□□□ -0.26
GCA-208ENST00000479199 IRF2BPLQ9H1B7 796 aa13.45□□□□□ -0.26
GCA-208ENST00000479199 MINDY3Q9H8M7 445 aa13.45□□□□□ -0.26
GCA-208ENST00000479199 CYP26B1Q9NR63 512 aa13.45□□□□□ -0.26
GCA-208ENST00000479199 WRAP73Q9P2S5 460 aaPredicted RBP13.45□□□□□ -0.26
GCA-208ENST00000479199 DDX25Q9UHL0 483 aaKnown RBP13.45□□□□□ -0.26
GCA-208ENST00000479199 VAV3Q9UKW4 847 aa13.45□□□□□ -0.26
GCA-208ENST00000479199 COL4A3BPQ9Y5P4 624 aa13.45□□□□□ -0.26
GCA-208ENST00000479199 GVINP1Q7Z2Y8 2422 aa13.44□□□□□ -0.26
GCA-208ENST00000479199 DDHD2O94830 711 aa13.44□□□□□ -0.26
GCA-208ENST00000479199 CNPP09543 421 aaKnown RBP13.44□□□□□ -0.26
GCA-208ENST00000479199 PSMA5P28066 241 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms