RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 KLHL18O94889 574 aa7.7□□□□□ -1.18
VPS50-212ENST00000476413 SLC16A1P53985 500 aa7.7□□□□□ -1.18
VPS50-212ENST00000476413 DLG4P78352 724 aa7.7□□□□□ -1.18
VPS50-212ENST00000476413 MAP3K12Q12852 859 aa7.7□□□□□ -1.18
VPS50-212ENST00000476413 UBE4AQ14139 1066 aa7.7□□□□□ -1.18
VPS50-212ENST00000476413 MUM1L1Q5H9M0 696 aa7.7□□□□□ -1.18
VPS50-212ENST00000476413 TMEM132EQ6IEE7 984 aa7.7□□□□□ -1.18
VPS50-212ENST00000476413 WDR48Q8TAF3 677 aa7.7□□□□□ -1.18
VPS50-212ENST00000476413 MVB12AQ96EY5 273 aa7.7□□□□□ -1.18
VPS50-212ENST00000476413 PCGF6Q9BYE7 350 aa7.7□□□□□ -1.18
VPS50-212ENST00000476413 GREM2Q9H772 168 aa7.7□□□□□ -1.18
VPS50-212ENST00000476413 C1orf112Q9NSG2 853 aa7.7□□□□□ -1.18
VPS50-212ENST00000476413 Q9UFV3 132 aa7.7□□□□□ -1.18
VPS50-212ENST00000476413 SAP30BPQ9UHR5 308 aaKnown RBP7.7□□□□□ -1.18
VPS50-212ENST00000476413 DNAI1Q9UI46 699 aa7.7□□□□□ -1.18
VPS50-212ENST00000476413 RCAN3Q9UKA8 241 aa7.7□□□□□ -1.18
VPS50-212ENST00000476413 SYNPO2Q9UMS6 1093 aa7.7□□□□□ -1.18
VPS50-212ENST00000476413 A0A1W2PR48 441 aa7.69□□□□□ -1.18
VPS50-212ENST00000476413 H0Y858 1186 aa7.69□□□□□ -1.18
VPS50-212ENST00000476413 NRP2O60462 931 aa7.69□□□□□ -1.18
VPS50-212ENST00000476413 PEX14O75381 377 aa7.69□□□□□ -1.18
VPS50-212ENST00000476413 MYBP10242 640 aa7.69□□□□□ -1.18
VPS50-212ENST00000476413 TRIM27P14373 513 aa7.69□□□□□ -1.18
VPS50-212ENST00000476413 USP14P54578 494 aa7.69□□□□□ -1.18
VPS50-212ENST00000476413 RHBDL3P58872 404 aa7.69□□□□□ -1.18
VPS50-212ENST00000476413 CD69Q07108 199 aa7.69□□□□□ -1.18
VPS50-212ENST00000476413 MGAT5Q09328 741 aa7.69□□□□□ -1.18
VPS50-212ENST00000476413 TOP3AQ13472 1001 aaPredicted RBP7.69□□□□□ -1.18
VPS50-212ENST00000476413 EIF4HQ15056 248 aaKnown RBP7.69□□□□□ -1.18
VPS50-212ENST00000476413 KSR2Q6VAB6 950 aa7.69□□□□□ -1.18
VPS50-212ENST00000476413 CHST15Q7LFX5 561 aaPredicted RBP7.69□□□□□ -1.18
VPS50-212ENST00000476413 OVCH2Q7RTZ1 564 aa7.69□□□□□ -1.18
VPS50-212ENST00000476413 NBPF11Q86T75 865 aa7.69□□□□□ -1.18
VPS50-212ENST00000476413 GLB1L2Q8IW92 636 aa7.69□□□□□ -1.18
VPS50-212ENST00000476413 GRAMD1CQ8IYS0 662 aa7.69□□□□□ -1.18
VPS50-212ENST00000476413 Q8N3U1 123 aa7.69□□□□□ -1.18
VPS50-212ENST00000476413 ZBTB34Q8NCN2 500 aa7.69□□□□□ -1.18
VPS50-212ENST00000476413 FBXO15Q8NCQ5 510 aaPredicted RBP7.69□□□□□ -1.18
VPS50-212ENST00000476413 FNIP1Q8TF40 1166 aa7.69□□□□□ -1.18
VPS50-212ENST00000476413 HOXB13Q92826 284 aaPredicted RBP7.69□□□□□ -1.18
VPS50-212ENST00000476413 SARGQ9BW04 601 aa7.69□□□□□ -1.18
VPS50-212ENST00000476413 OSBPL6Q9BZF3 934 aa7.69□□□□□ -1.18
VPS50-212ENST00000476413 FBXO10Q9UK96 956 aa7.69□□□□□ -1.18
VPS50-212ENST00000476413 CDC42EP3Q9UKI2 254 aa7.69□□□□□ -1.18
VPS50-212ENST00000476413 CTNND1O60716 968 aaKnown RBP7.68□□□□□ -1.18
VPS50-212ENST00000476413 LY86O95711 162 aa7.68□□□□□ -1.18
VPS50-212ENST00000476413 ZNF28P17035 718 aa7.68□□□□□ -1.18
VPS50-212ENST00000476413 IRAK1P51617 712 aa7.68□□□□□ -1.18
VPS50-212ENST00000476413 PURAQ00577 322 aaKnown RBP7.68□□□□□ -1.18
VPS50-212ENST00000476413 OTOP2Q7RTS6 562 aa7.68□□□□□ -1.18
VPS50-212ENST00000476413 MARCH10Q8NA82 808 aaPredicted RBP7.68□□□□□ -1.18
VPS50-212ENST00000476413 PPP1R35Q8TAP8 253 aa7.68□□□□□ -1.18
VPS50-212ENST00000476413 DPF2Q92785 391 aa7.68□□□□□ -1.18
VPS50-212ENST00000476413 MAP3K14Q99558 947 aa7.68□□□□□ -1.18
VPS50-212ENST00000476413 SAE1Q9UBE0 346 aaPredicted RBP7.68□□□□□ -1.18
VPS50-212ENST00000476413 FRMPD2Q68DX3 1309 aaPredicted RBP7.68□□□□□ -1.18
VPS50-212ENST00000476413 HNRNPLP14866 589 aaKnown RBP eCLIP7.67□□□□□ -1.18
VPS50-212ENST00000476413 XPAP23025 273 aaPredicted RBP7.67□□□□□ -1.18
VPS50-212ENST00000476413 STAT5BP51692 787 aa7.67□□□□□ -1.18
VPS50-212ENST00000476413 NRG3P56975 720 aa7.67□□□□□ -1.18
VPS50-212ENST00000476413 MGAT2Q10469 447 aa7.67□□□□□ -1.18
VPS50-212ENST00000476413 SEPT2Q15019 361 aa7.67□□□□□ -1.18
VPS50-212ENST00000476413 TRIM68Q6AZZ1 485 aa7.67□□□□□ -1.18
VPS50-212ENST00000476413 LMBR1LQ6UX01 489 aa7.67□□□□□ -1.18
VPS50-212ENST00000476413 FAM129CQ86XR2 697 aa7.67□□□□□ -1.18
VPS50-212ENST00000476413 PIK3C3Q8NEB9 887 aa7.67□□□□□ -1.18
VPS50-212ENST00000476413 NUDT10Q8NFP7 164 aa7.67□□□□□ -1.18
VPS50-212ENST00000476413 PMM1Q92871 262 aa7.67□□□□□ -1.18
VPS50-212ENST00000476413 NUDT11Q96G61 164 aa7.67□□□□□ -1.18
VPS50-212ENST00000476413 DDX21Q9NR30 783 aaKnown RBP eCLIP7.67□□□□□ -1.18
VPS50-212ENST00000476413 INTUQ9ULD6 942 aa7.67□□□□□ -1.18
VPS50-212ENST00000476413 PMF1-BGLAPU3KQ54 211 aa7.67□□□□□ -1.18
VPS50-212ENST00000476413 H3BML4 177 aa7.66□□□□□ -1.18
VPS50-212ENST00000476413 ALDH2P05091 517 aa7.66□□□□□ -1.18
VPS50-212ENST00000476413 GSPT1P15170 499 aaKnown RBP7.66□□□□□ -1.18
VPS50-212ENST00000476413 CTSSP25774 331 aa7.66□□□□□ -1.18
VPS50-212ENST00000476413 POLD1P28340 1107 aa7.66□□□□□ -1.18
VPS50-212ENST00000476413 IL13P35225 146 aa7.66□□□□□ -1.18
VPS50-212ENST00000476413 DSC2Q02487 901 aa7.66□□□□□ -1.18
VPS50-212ENST00000476413 IL10RAQ13651 578 aa7.66□□□□□ -1.18
VPS50-212ENST00000476413 PGS1Q32NB8 556 aa7.66□□□□□ -1.18
VPS50-212ENST00000476413 VWA3BQ502W6 1294 aa7.66□□□□□ -1.18
VPS50-212ENST00000476413 SYCP2LQ5T4T6 812 aa7.66□□□□□ -1.18
VPS50-212ENST00000476413 TRMT10BQ6PF06 316 aaKnown RBP7.66□□□□□ -1.18
VPS50-212ENST00000476413 KLHDC10Q6PID8 442 aa7.66□□□□□ -1.18
VPS50-212ENST00000476413 ABHD15Q6UXT9 468 aa7.66□□□□□ -1.18
VPS50-212ENST00000476413 RIN2Q8WYP3 895 aaPredicted RBP7.66□□□□□ -1.18
VPS50-212ENST00000476413 C1GALT1C1Q96EU7 318 aa7.66□□□□□ -1.18
VPS50-212ENST00000476413 WDR92Q96MX6 357 aa7.66□□□□□ -1.18
VPS50-212ENST00000476413 FAM193BQ96PV7 902 aaPredicted RBP7.66□□□□□ -1.18
VPS50-212ENST00000476413 CHMP4AQ9BY43 222 aa7.66□□□□□ -1.18
VPS50-212ENST00000476413 RBM12Q9NTZ6 932 aaKnown RBP7.66□□□□□ -1.18
VPS50-212ENST00000476413 ETV2O00321 342 aaPredicted RBP7.65□□□□□ -1.18
VPS50-212ENST00000476413 CYP7B1O75881 506 aa7.65□□□□□ -1.18
VPS50-212ENST00000476413 TUSC2O75896 110 aa7.65□□□□□ -1.18
VPS50-212ENST00000476413 KRT1P04264 644 aa7.65□□□□□ -1.18
VPS50-212ENST00000476413 GAAP10253 952 aa7.65□□□□□ -1.18
VPS50-212ENST00000476413 TAL1P17542 331 aaPredicted RBP7.65□□□□□ -1.18
VPS50-212ENST00000476413 ETV4P43268 484 aa7.65□□□□□ -1.18
VPS50-212ENST00000476413 KCNQ1P51787 676 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms