RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 NAP1L4Q99733 375 aaKnown RBP14.86□□□□□ -0.03
CPSF4-210ENST00000469897 DHX33Q9H6R0 707 aaKnown RBP14.86□□□□□ -0.03
CPSF4-210ENST00000469897 NRDE2Q9H7Z3 1164 aa14.86□□□□□ -0.03
CPSF4-210ENST00000469897 FAM105AQ9NUU6 356 aa14.86□□□□□ -0.03
CPSF4-210ENST00000469897 INPP5FQ9Y2H2 1132 aa14.86□□□□□ -0.03
CPSF4-210ENST00000469897 COL4A3BPQ9Y5P4 624 aa14.86□□□□□ -0.03
CPSF4-210ENST00000469897 RALGAPA2Q2PPJ7 1873 aa14.85□□□□□ -0.03
CPSF4-210ENST00000469897 FSD2A1L4K1 749 aa14.85□□□□□ -0.03
CPSF4-210ENST00000469897 C2orf71A6NGG8 1288 aa14.85□□□□□ -0.03
CPSF4-210ENST00000469897 CLASP2O75122 1294 aaKnown RBP14.85□□□□□ -0.03
CPSF4-210ENST00000469897 ZNF623O75123 536 aa14.85□□□□□ -0.03
CPSF4-210ENST00000469897 ZC3H11AO75152 810 aaKnown RBP eCLIP14.85□□□□□ -0.03
CPSF4-210ENST00000469897 SLITRK3O94933 977 aa14.85□□□□□ -0.03
CPSF4-210ENST00000469897 SRGAP2BP0DMP2 458 aa14.85□□□□□ -0.03
CPSF4-210ENST00000469897 KRT2P35908 639 aa14.85□□□□□ -0.03
CPSF4-210ENST00000469897 ANAPC15P60006 121 aa14.85□□□□□ -0.03
CPSF4-210ENST00000469897 CYP4A11Q02928 519 aa14.85□□□□□ -0.03
CPSF4-210ENST00000469897 LAMTOR4Q0VGL1 99 aa14.85□□□□□ -0.03
CPSF4-210ENST00000469897 SMC1AQ14683 1233 aaKnown RBP14.85□□□□□ -0.03
CPSF4-210ENST00000469897 CBX2Q14781 532 aaPredicted RBP14.85□□□□□ -0.03
CPSF4-210ENST00000469897 XKR9Q5GH70 373 aa14.85□□□□□ -0.03
CPSF4-210ENST00000469897 NOMO2Q5JPE7 1267 aa14.85□□□□□ -0.03
CPSF4-210ENST00000469897 GLB1LQ6UWU2 654 aa14.85□□□□□ -0.03
CPSF4-210ENST00000469897 TMEM173Q86WV6 379 aaPredicted RBP14.85□□□□□ -0.03
CPSF4-210ENST00000469897 EXOC8Q8IYI6 725 aa14.85□□□□□ -0.03
CPSF4-210ENST00000469897 VPS52Q8N1B4 723 aa14.85□□□□□ -0.03
CPSF4-210ENST00000469897 AUTS2Q8WXX7 1259 aa14.85□□□□□ -0.03
CPSF4-210ENST00000469897 LXNQ9BS40 222 aa14.85□□□□□ -0.03
CPSF4-210ENST00000469897 GBP3Q9H0R5 595 aa14.85□□□□□ -0.03
CPSF4-210ENST00000469897 MINDY3Q9H8M7 445 aa14.85□□□□□ -0.03
CPSF4-210ENST00000469897 TBC1D13Q9NVG8 400 aa14.85□□□□□ -0.03
CPSF4-210ENST00000469897 PPP4R2Q9NY27 417 aa14.85□□□□□ -0.03
CPSF4-210ENST00000469897 PCDHB2Q9Y5E7 798 aa14.85□□□□□ -0.03
CPSF4-210ENST00000469897 NCOR1O75376 2440 aa14.84□□□□□ -0.03
CPSF4-210ENST00000469897 LARGE1O95461 756 aa14.84□□□□□ -0.03
CPSF4-210ENST00000469897 GALTP07902 379 aa14.84□□□□□ -0.03
CPSF4-210ENST00000469897 HOXA11P31270 313 aaPredicted RBP14.84□□□□□ -0.03
CPSF4-210ENST00000469897 HOXD11P31277 338 aaPredicted RBP14.84□□□□□ -0.03
CPSF4-210ENST00000469897 RFC5P40937 340 aa14.84□□□□□ -0.03
CPSF4-210ENST00000469897 AFF1P51825 1210 aaKnown RBP14.84□□□□□ -0.03
CPSF4-210ENST00000469897 ZXDAP98168 799 aa14.84□□□□□ -0.03
CPSF4-210ENST00000469897 RNASELQ05823 741 aaKnown RBP14.84□□□□□ -0.03
CPSF4-210ENST00000469897 SPIRE1Q08AE8 756 aa14.84□□□□□ -0.03
CPSF4-210ENST00000469897 TRIM67Q6ZTA4 783 aa14.84□□□□□ -0.03
CPSF4-210ENST00000469897 SRGAP1Q7Z6B7 1085 aa14.84□□□□□ -0.03
CPSF4-210ENST00000469897 ZNF280BQ86YH2 543 aa14.84□□□□□ -0.03
CPSF4-210ENST00000469897 SLFN12Q8IYM2 578 aa14.84□□□□□ -0.03
CPSF4-210ENST00000469897 PSPC1Q8WXF1 523 aaKnown RBP14.84□□□□□ -0.03
CPSF4-210ENST00000469897 TNFRSF25Q93038 417 aa14.84□□□□□ -0.03
CPSF4-210ENST00000469897 PGBD4Q96DM1 585 aa14.84□□□□□ -0.03
CPSF4-210ENST00000469897 TMEM169Q96HH4 297 aa14.84□□□□□ -0.03
CPSF4-210ENST00000469897 MFSD14AQ96MC6 490 aa14.84□□□□□ -0.03
CPSF4-210ENST00000469897 ZSWIM4Q9H7M6 989 aa14.84□□□□□ -0.03
CPSF4-210ENST00000469897 DNAJB4Q9UDY4 337 aa14.84□□□□□ -0.03
CPSF4-210ENST00000469897 CDH22Q9UJ99 828 aa14.84□□□□□ -0.03
CPSF4-210ENST00000469897 PCDHA12Q9UN75 941 aa14.84□□□□□ -0.03
CPSF4-210ENST00000469897 HCFC2Q9Y5Z7 792 aa14.84□□□□□ -0.03
CPSF4-210ENST00000469897 NLRC5Q86WI3 1866 aa14.83□□□□□ -0.04
CPSF4-210ENST00000469897 A0A087WWV3 80 aa14.83□□□□□ -0.04
CPSF4-210ENST00000469897 BTBD18B2RXH4 712 aa14.83□□□□□ -0.04
CPSF4-210ENST00000469897 ASAP2O43150 1006 aa14.83□□□□□ -0.04
CPSF4-210ENST00000469897 DDHD2O94830 711 aa14.83□□□□□ -0.04
CPSF4-210ENST00000469897 HOXB8P17481 243 aaPredicted RBP14.83□□□□□ -0.04
CPSF4-210ENST00000469897 SP100P23497 879 aaPredicted RBP14.83□□□□□ -0.04
CPSF4-210ENST00000469897 RAB27AP51159 221 aa14.83□□□□□ -0.04
CPSF4-210ENST00000469897 NEK4P51957 841 aa14.83□□□□□ -0.04
CPSF4-210ENST00000469897 FOSBP53539 338 aa14.83□□□□□ -0.04
CPSF4-210ENST00000469897 BMS1Q14692 1282 aaKnown RBP14.83□□□□□ -0.04
CPSF4-210ENST00000469897 UBXN11Q5T124 520 aa14.83□□□□□ -0.04
CPSF4-210ENST00000469897 KANK3Q6NY19 840 aa14.83□□□□□ -0.04
CPSF4-210ENST00000469897 AGMOQ6ZNB7 445 aa14.83□□□□□ -0.04
CPSF4-210ENST00000469897 MRPL10Q7Z7H8 261 aaKnown RBP14.83□□□□□ -0.04
CPSF4-210ENST00000469897 FERMT3Q86UX7 667 aa14.83□□□□□ -0.04
CPSF4-210ENST00000469897 TMEM87AQ8NBN3 555 aa14.83□□□□□ -0.04
CPSF4-210ENST00000469897 RNF149Q8NC42 400 aa14.83□□□□□ -0.04
CPSF4-210ENST00000469897 BCL7CQ8WUZ0 217 aaPredicted RBP14.83□□□□□ -0.04
CPSF4-210ENST00000469897 TCP11Q8WWU5 503 aa14.83□□□□□ -0.04
CPSF4-210ENST00000469897 CASP10Q92851 521 aa14.83□□□□□ -0.04
CPSF4-210ENST00000469897 IGSF21Q96ID5 467 aa14.83□□□□□ -0.04
CPSF4-210ENST00000469897 HSD17B14Q9BPX1 270 aa14.83□□□□□ -0.04
CPSF4-210ENST00000469897 EIF2AK1Q9BQI3 630 aaKnown RBP14.83□□□□□ -0.04
CPSF4-210ENST00000469897 AGPAT5Q9NUQ2 364 aa14.83□□□□□ -0.04
CPSF4-210ENST00000469897 PPME1Q9Y570 386 aa14.83□□□□□ -0.04
CPSF4-210ENST00000469897 BRWD1Q9NSI6 2320 aa14.83□□□□□ -0.04
CPSF4-210ENST00000469897 MYO7AQ13402 2215 aa14.82□□□□□ -0.04
CPSF4-210ENST00000469897 TMEM221A6NGB7 291 aa14.82□□□□□ -0.04
CPSF4-210ENST00000469897 M0R296 226 aa14.82□□□□□ -0.04
CPSF4-210ENST00000469897 JAK2O60674 1132 aa14.82□□□□□ -0.04
CPSF4-210ENST00000469897 ALDH2P05091 517 aa14.82□□□□□ -0.04
CPSF4-210ENST00000469897 TXKP42681 527 aa14.82□□□□□ -0.04
CPSF4-210ENST00000469897 SLC11A1P49279 550 aa14.82□□□□□ -0.04
CPSF4-210ENST00000469897 EMC2Q15006 297 aa14.82□□□□□ -0.04
CPSF4-210ENST00000469897 TPRNQ4KMQ1 711 aa14.82□□□□□ -0.04
CPSF4-210ENST00000469897 DDX53Q86TM3 631 aaKnown RBP14.82□□□□□ -0.04
CPSF4-210ENST00000469897 C12orf76Q8N812 135 aaPredicted RBP14.82□□□□□ -0.04
CPSF4-210ENST00000469897 NSUN7Q8NE18 718 aaKnown RBP14.82□□□□□ -0.04
CPSF4-210ENST00000469897 GTF3C6Q969F1 213 aa14.82□□□□□ -0.04
CPSF4-210ENST00000469897 PBXIP1Q96AQ6 731 aa14.82□□□□□ -0.04
CPSF4-210ENST00000469897 FBXL18Q96ME1 805 aa14.82□□□□□ -0.04
CPSF4-210ENST00000469897 ZBP1Q9H171 429 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms