RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 TPCN2Q8NHX9 752 aa16.09■□□□□ 0.17
SF1-211ENST00000448404 SEMA4DQ92854 862 aa16.09■□□□□ 0.17
SF1-211ENST00000448404 NR3C2P08235 984 aa16.08■□□□□ 0.16
SF1-211ENST00000448404 RPS6KA1Q15418 735 aa16.08■□□□□ 0.16
SF1-211ENST00000448404 CFAP221Q4G0U5 840 aa16.08■□□□□ 0.16
SF1-211ENST00000448404 RNF10Q8N5U6 811 aaKnown RBP16.08■□□□□ 0.16
SF1-211ENST00000448404 LRRC57Q8N9N7 239 aa16.08■□□□□ 0.16
SF1-211ENST00000448404 LMO3Q8TAP4 145 aa16.08■□□□□ 0.16
SF1-211ENST00000448404 BTBD6Q96KE9 485 aa16.08■□□□□ 0.16
SF1-211ENST00000448404 STRA6Q9BX79 667 aa16.08■□□□□ 0.16
SF1-211ENST00000448404 STIM2Q9P246 746 aa16.08■□□□□ 0.16
SF1-211ENST00000448404 LARSQ9P2J5 1176 aaKnown RBP16.08■□□□□ 0.16
SF1-211ENST00000448404 SYNPO2Q9UMS6 1093 aa16.08■□□□□ 0.16
SF1-211ENST00000448404 PPP1R12BO60237 982 aaPredicted RBP16.08■□□□□ 0.16
SF1-211ENST00000448404 BUB1BO60566 1050 aaPredicted RBP16.08■□□□□ 0.16
SF1-211ENST00000448404 CTNND1O60716 968 aaKnown RBP16.08■□□□□ 0.16
SF1-211ENST00000448404 H2AFZP0C0S5 128 aa16.08■□□□□ 0.16
SF1-211ENST00000448404 PTPRAP18433 802 aa16.08■□□□□ 0.16
SF1-211ENST00000448404 BACE1P56817 501 aa16.08■□□□□ 0.16
SF1-211ENST00000448404 CNTN2Q02246 1040 aa16.08■□□□□ 0.16
SF1-211ENST00000448404 KCTD16Q68DU8 428 aa16.08■□□□□ 0.16
SF1-211ENST00000448404 H2AFVQ71UI9 128 aa16.08■□□□□ 0.16
SF1-211ENST00000448404 AENQ8WTP8 325 aaKnown RBP16.08■□□□□ 0.16
SF1-211ENST00000448404 CELF4Q9BZC1 486 aaKnown RBP16.08■□□□□ 0.16
SF1-211ENST00000448404 GGA3Q9NZ52 723 aa16.08■□□□□ 0.16
SF1-211ENST00000448404 ODF2LQ9ULJ1 636 aa16.08■□□□□ 0.16
SF1-211ENST00000448404 COG5Q9UP83 839 aa16.08■□□□□ 0.16
SF1-211ENST00000448404 PLA2G6O60733 806 aa16.07■□□□□ 0.16
SF1-211ENST00000448404 KIF4AO95239 1232 aa16.07■□□□□ 0.16
SF1-211ENST00000448404 DLATP10515 647 aaKnown RBP16.07■□□□□ 0.16
SF1-211ENST00000448404 SEZ6Q53EL9 994 aa16.07■□□□□ 0.16
SF1-211ENST00000448404 HSP90B2PQ58FF3 399 aa16.07■□□□□ 0.16
SF1-211ENST00000448404 SLC35G2Q8TBE7 412 aa16.07■□□□□ 0.16
SF1-211ENST00000448404 ZNF668Q96K58 619 aaPredicted RBP16.07■□□□□ 0.16
SF1-211ENST00000448404 TRIM31Q9BZY9 425 aa16.07■□□□□ 0.16
SF1-211ENST00000448404 TMOD4Q9NZQ9 345 aa16.07■□□□□ 0.16
SF1-211ENST00000448404 APEX2Q9UBZ4 518 aa16.07■□□□□ 0.16
SF1-211ENST00000448404 DOCK5Q9H7D0 1870 aa16.07■□□□□ 0.16
SF1-211ENST00000448404 PFASO15067 1338 aa16.07■□□□□ 0.16
SF1-211ENST00000448404 ANKRD65E5RJM6 399 aa16.07■□□□□ 0.16
SF1-211ENST00000448404 ZBED4O75132 1171 aa16.07■□□□□ 0.16
SF1-211ENST00000448404 PLS3P13797 630 aa16.07■□□□□ 0.16
SF1-211ENST00000448404 MARCKSL1P49006 195 aa16.07■□□□□ 0.16
SF1-211ENST00000448404 VAMP7P51809 220 aa16.07■□□□□ 0.16
SF1-211ENST00000448404 SP2Q02086 613 aa16.07■□□□□ 0.16
SF1-211ENST00000448404 PPM1KQ8N3J5 372 aa16.07■□□□□ 0.16
SF1-211ENST00000448404 CASKIN2Q8WXE0 1202 aa16.07■□□□□ 0.16
SF1-211ENST00000448404 LPAR1Q92633 364 aa16.07■□□□□ 0.16
SF1-211ENST00000448404 CEP170P1Q96L14 293 aa16.07■□□□□ 0.16
SF1-211ENST00000448404 DENND3A2RUS2 1198 aa16.06■□□□□ 0.16
SF1-211ENST00000448404 SLC26A4O43511 780 aa16.06■□□□□ 0.16
SF1-211ENST00000448404 SGPL1O95470 568 aa16.06■□□□□ 0.16
SF1-211ENST00000448404 NPTX2P47972 431 aa16.06■□□□□ 0.16
SF1-211ENST00000448404 HIRAP54198 1017 aaPredicted RBP16.06■□□□□ 0.16
SF1-211ENST00000448404 WNT7BP56706 349 aa16.06■□□□□ 0.16
SF1-211ENST00000448404 ZNF280AP59817 542 aaPredicted RBP16.06■□□□□ 0.16
SF1-211ENST00000448404 TRAF1Q13077 416 aa16.06■□□□□ 0.16
SF1-211ENST00000448404 TNIP1Q15025 636 aa16.06■□□□□ 0.16
SF1-211ENST00000448404 LLGL2Q6P1M3 1020 aa16.06■□□□□ 0.16
SF1-211ENST00000448404 PEX26Q7Z412 305 aa16.06■□□□□ 0.16
SF1-211ENST00000448404 MCF2L2Q86YR7 1114 aa16.06■□□□□ 0.16
SF1-211ENST00000448404 CCDC60Q8IWA6 550 aaPredicted RBP16.06■□□□□ 0.16
SF1-211ENST00000448404 SH2D3CQ8N5H7 860 aa16.06■□□□□ 0.16
SF1-211ENST00000448404 PSME4Q14997 1843 aa16.06■□□□□ 0.16
SF1-211ENST00000448404 TARSL2A2RTX5 802 aaKnown RBP16.06■□□□□ 0.16
SF1-211ENST00000448404 KRT14P02533 472 aa16.06■□□□□ 0.16
SF1-211ENST00000448404 PRKCIP41743 596 aa16.06■□□□□ 0.16
SF1-211ENST00000448404 ZNF280CQ8ND82 737 aa16.06■□□□□ 0.16
SF1-211ENST00000448404 ARL8AQ96BM9 186 aa16.06■□□□□ 0.16
SF1-211ENST00000448404 TMEM117Q9H0C3 514 aa16.06■□□□□ 0.16
SF1-211ENST00000448404 ZNF214Q9UL59 606 aaPredicted RBP16.06■□□□□ 0.16
SF1-211ENST00000448404 CYP26A1O43174 497 aa16.05■□□□□ 0.16
SF1-211ENST00000448404 EIF3JO75822 258 aaKnown RBP16.05■□□□□ 0.16
SF1-211ENST00000448404 PRLRP16471 622 aa16.05■□□□□ 0.16
SF1-211ENST00000448404 TNFAIP1Q13829 316 aa16.05■□□□□ 0.16
SF1-211ENST00000448404 SLC39A4Q6P5W5 647 aa16.05■□□□□ 0.16
SF1-211ENST00000448404 SLC47A2Q86VL8 602 aa16.05■□□□□ 0.16
SF1-211ENST00000448404 STK33Q9BYT3 514 aa16.05■□□□□ 0.16
SF1-211ENST00000448404 SEPT9Q9UHD8 586 aaPredicted RBP16.05■□□□□ 0.16
SF1-211ENST00000448404 AMACRQ9UHK6 382 aa16.05■□□□□ 0.16
SF1-211ENST00000448404 KRT13P13646 458 aa16.05■□□□□ 0.16
SF1-211ENST00000448404 MTERF2Q49AM1 385 aa16.05■□□□□ 0.16
SF1-211ENST00000448404 TAF4BQ92750 862 aa16.05■□□□□ 0.16
SF1-211ENST00000448404 TMEM143Q96AN5 459 aa16.05■□□□□ 0.16
SF1-211ENST00000448404 RPGRIP1Q96KN7 1286 aa16.05■□□□□ 0.16
SF1-211ENST00000448404 PCDHB18PQ96TA0 734 aa16.05■□□□□ 0.16
SF1-211ENST00000448404 TSPYL1Q9H0U9 437 aa16.05■□□□□ 0.16
SF1-211ENST00000448404 LUC7LQ9NQ29 371 aaKnown RBP16.05■□□□□ 0.16
SF1-211ENST00000448404 A1CFQ9NQ94 594 aaKnown RBP16.05■□□□□ 0.16
SF1-211ENST00000448404 PICK1Q9NRD5 415 aa16.05■□□□□ 0.16
SF1-211ENST00000448404 SEL1LQ9UBV2 794 aa16.05■□□□□ 0.16
SF1-211ENST00000448404 RSPH14Q9UHP6 348 aa16.05■□□□□ 0.16
SF1-211ENST00000448404 BCRP11274 1271 aa16.04■□□□□ 0.16
SF1-211ENST00000448404 DCAF12L1Q5VU92 463 aa16.04■□□□□ 0.16
SF1-211ENST00000448404 DAB2IPQ5VWQ8 1189 aa16.04■□□□□ 0.16
SF1-211ENST00000448404 MOB2Q70IA6 237 aa16.04■□□□□ 0.16
SF1-211ENST00000448404 NLRX1Q86UT6 975 aa16.04■□□□□ 0.16
SF1-211ENST00000448404 C10orf67Q8IYJ2 551 aa16.04■□□□□ 0.16
SF1-211ENST00000448404 USP38Q8NB14 1042 aa16.04■□□□□ 0.16
SF1-211ENST00000448404 SLC30A5Q8TAD4 765 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 107.7 ms