RNA–Protein interactions for RNA: ENST00000442009.6

POLR1E-203, Transcript of RNA polymerase I subunit E, humanhuman

TSL 2

Gene POLR1E, Length 1,805 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1E-203ENST00000442009 SLC9A1P19634 815 aa20.5■□□□□ 0.87
POLR1E-203ENST00000442009 BFSP1Q12934 665 aa20.5■□□□□ 0.87
POLR1E-203ENST00000442009 TAF1CQ15572 869 aaPredicted RBP20.5■□□□□ 0.87
POLR1E-203ENST00000442009 PRIMPOLQ96LW4 560 aa20.5■□□□□ 0.87
POLR1E-203ENST00000442009 FBXL18Q96ME1 805 aa20.5■□□□□ 0.87
POLR1E-203ENST00000442009 PCIF1Q9H4Z3 704 aa20.5■□□□□ 0.87
POLR1E-203ENST00000442009 SIX2Q9NPC8 291 aa20.5■□□□□ 0.87
POLR1E-203ENST00000442009 ZNHIT6Q9NWK9 470 aaKnown RBP20.5■□□□□ 0.87
POLR1E-203ENST00000442009 FBXL5Q9UKA1 691 aa20.5■□□□□ 0.87
POLR1E-203ENST00000442009 REXO2Q9Y3B8 237 aaKnown RBP20.5■□□□□ 0.87
POLR1E-203ENST00000442009 LRRC53A6NM62 1247 aa20.49■□□□□ 0.87
POLR1E-203ENST00000442009 TLR2O60603 784 aa20.49■□□□□ 0.87
POLR1E-203ENST00000442009 GH1P01241 217 aa20.49■□□□□ 0.87
POLR1E-203ENST00000442009 ADCYAP1R1P41586 468 aa20.49■□□□□ 0.87
POLR1E-203ENST00000442009 FMO5P49326 533 aa20.49■□□□□ 0.87
POLR1E-203ENST00000442009 ETF1P62495 437 aaKnown RBP20.49■□□□□ 0.87
POLR1E-203ENST00000442009 APBA1Q02410 837 aa20.49■□□□□ 0.87
POLR1E-203ENST00000442009 MKRN4PQ13434 485 aaPredicted RBP20.49■□□□□ 0.87
POLR1E-203ENST00000442009 EXOC3L4Q17RC7 722 aa20.49■□□□□ 0.87
POLR1E-203ENST00000442009 GJC2Q5T442 439 aaPredicted RBP20.49■□□□□ 0.87
POLR1E-203ENST00000442009 TCERG1LQ5VWI1 586 aa20.49■□□□□ 0.87
POLR1E-203ENST00000442009 INTS8Q75QN2 995 aaKnown RBP20.49■□□□□ 0.87
POLR1E-203ENST00000442009 RRAGAQ7L523 313 aa20.49■□□□□ 0.87
POLR1E-203ENST00000442009 CCDC170Q8IYT3 715 aa20.49■□□□□ 0.87
POLR1E-203ENST00000442009 ZSWIM2Q8NEG5 633 aa20.49■□□□□ 0.87
POLR1E-203ENST00000442009 NUCKS1Q9H1E3 243 aaKnown RBP20.49■□□□□ 0.87
POLR1E-203ENST00000442009 ABHD16BQ9H3Z7 469 aa20.49■□□□□ 0.87
POLR1E-203ENST00000442009 HOXC6P09630 235 aa20.48■□□□□ 0.87
POLR1E-203ENST00000442009 C1orf220Q5T0J3 134 aa20.48■□□□□ 0.87
POLR1E-203ENST00000442009 KLHDC7AQ5VTJ3 777 aa20.48■□□□□ 0.87
POLR1E-203ENST00000442009 GBP6Q6ZN66 633 aa20.48■□□□□ 0.87
POLR1E-203ENST00000442009 PPTC7Q8NI37 304 aa20.48■□□□□ 0.87
POLR1E-203ENST00000442009 USP6NLQ92738 828 aa20.48■□□□□ 0.87
POLR1E-203ENST00000442009 NHEJ1Q9H9Q4 299 aaPredicted RBP20.48■□□□□ 0.87
POLR1E-203ENST00000442009 ARHGAP20Q9P2F6 1191 aa20.48■□□□□ 0.87
POLR1E-203ENST00000442009 PIGRP01833 764 aa20.48■□□□□ 0.87
POLR1E-203ENST00000442009 POLR2FP61218 127 aaKnown RBP20.48■□□□□ 0.87
POLR1E-203ENST00000442009 DRP2Q13474 957 aa20.48■□□□□ 0.87
POLR1E-203ENST00000442009 IRF5Q13568 498 aa20.48■□□□□ 0.87
POLR1E-203ENST00000442009 EXOC8Q8IYI6 725 aa20.48■□□□□ 0.87
POLR1E-203ENST00000442009 ACRBPQ8NEB7 543 aa20.48■□□□□ 0.87
POLR1E-203ENST00000442009 PAXBP1Q9Y5B6 917 aa20.48■□□□□ 0.87
POLR1E-203ENST00000442009 STYXL1Q9Y6J8 313 aa20.48■□□□□ 0.87
POLR1E-203ENST00000442009 A0A0U1RQJ8 604 aa20.47■□□□□ 0.87
POLR1E-203ENST00000442009 GAS2O43903 313 aaKnown RBP20.47■□□□□ 0.87
POLR1E-203ENST00000442009 ACTN1P12814 892 aa20.47■□□□□ 0.87
POLR1E-203ENST00000442009 HOXD8P13378 290 aaPredicted RBP20.47■□□□□ 0.87
POLR1E-203ENST00000442009 GARTP22102 1010 aa20.47■□□□□ 0.87
POLR1E-203ENST00000442009 MARK3P27448 753 aa20.47■□□□□ 0.87
POLR1E-203ENST00000442009 MAP2K5Q13163 448 aa20.47■□□□□ 0.87
POLR1E-203ENST00000442009 ACVR2BQ13705 512 aa20.47■□□□□ 0.87
POLR1E-203ENST00000442009 DUSP28Q4G0W2 176 aa20.47■□□□□ 0.87
POLR1E-203ENST00000442009 CBWD6Q4V339 395 aa20.47■□□□□ 0.87
POLR1E-203ENST00000442009 CBWD3Q5JTY5 395 aa20.47■□□□□ 0.87
POLR1E-203ENST00000442009 CBWD5Q5RIA9 395 aa20.47■□□□□ 0.87
POLR1E-203ENST00000442009 IER5Q5VY09 327 aa20.47■□□□□ 0.87
POLR1E-203ENST00000442009 HGSNATQ68CP4 663 aa20.47■□□□□ 0.87
POLR1E-203ENST00000442009 CACNA2D4Q7Z3S7 1137 aa20.47■□□□□ 0.87
POLR1E-203ENST00000442009 RDH13Q8NBN7 331 aa20.47■□□□□ 0.87
POLR1E-203ENST00000442009 PLEKHO2Q8TD55 490 aa20.47■□□□□ 0.87
POLR1E-203ENST00000442009 ATRIPQ8WXE1 791 aa20.47■□□□□ 0.87
POLR1E-203ENST00000442009 CCDC102AQ96A19 550 aa20.47■□□□□ 0.87
POLR1E-203ENST00000442009 NLRC4Q9NPP4 1024 aa20.47■□□□□ 0.87
POLR1E-203ENST00000442009 AIPL1Q9NZN9 384 aa20.47■□□□□ 0.87
POLR1E-203ENST00000442009 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.46■□□□□ 0.87
POLR1E-203ENST00000442009 EIF3CLB5ME19 914 aaKnown RBP20.46■□□□□ 0.87
POLR1E-203ENST00000442009 PMM2O15305 246 aa20.46■□□□□ 0.87
POLR1E-203ENST00000442009 HBP1O60381 514 aa20.46■□□□□ 0.87
POLR1E-203ENST00000442009 IGHA2P01877 340 aa20.46■□□□□ 0.87
POLR1E-203ENST00000442009 TRIM49P0CI25 452 aa20.46■□□□□ 0.87
POLR1E-203ENST00000442009 TRIM49CP0CI26 452 aa20.46■□□□□ 0.87
POLR1E-203ENST00000442009 UCHL3P15374 230 aa20.46■□□□□ 0.87
POLR1E-203ENST00000442009 VAMP7P51809 220 aa20.46■□□□□ 0.87
POLR1E-203ENST00000442009 DLG4P78352 724 aa20.46■□□□□ 0.87
POLR1E-203ENST00000442009 CAPSQ13938 189 aa20.46■□□□□ 0.87
POLR1E-203ENST00000442009 IQSEC1Q6DN90 963 aa20.46■□□□□ 0.87
POLR1E-203ENST00000442009 PRPF31Q8WWY3 499 aaKnown RBP20.46■□□□□ 0.87
POLR1E-203ENST00000442009 EIF3CQ99613 913 aaKnown RBP20.46■□□□□ 0.87
POLR1E-203ENST00000442009 RNPEPQ9H4A4 650 aa20.46■□□□□ 0.87
POLR1E-203ENST00000442009 TMEM134Q9H6X4 195 aa20.46■□□□□ 0.87
POLR1E-203ENST00000442009 SLC5A4Q9NY91 659 aa20.46■□□□□ 0.87
POLR1E-203ENST00000442009 ERAP1Q9NZ08 941 aa20.46■□□□□ 0.87
POLR1E-203ENST00000442009 FANCGO15287 622 aa20.46■□□□□ 0.87
POLR1E-203ENST00000442009 PPFIA4O75335 1185 aa20.46■□□□□ 0.87
POLR1E-203ENST00000442009 LCA5LO95447 670 aa20.46■□□□□ 0.87
POLR1E-203ENST00000442009 LGALS2P05162 132 aa20.46■□□□□ 0.87
POLR1E-203ENST00000442009 ADRB2P07550 413 aa20.46■□□□□ 0.87
POLR1E-203ENST00000442009 SMPD1P17405 629 aa20.46■□□□□ 0.87
POLR1E-203ENST00000442009 ARHGAP25P42331 645 aa20.46■□□□□ 0.87
POLR1E-203ENST00000442009 TM4SF4P48230 202 aa20.46■□□□□ 0.87
POLR1E-203ENST00000442009 ASTE1Q2TB18 679 aaPredicted RBP20.46■□□□□ 0.87
POLR1E-203ENST00000442009 ZNF662Q6ZS27 426 aa20.46■□□□□ 0.87
POLR1E-203ENST00000442009 AFG1LQ8WV93 481 aa20.46■□□□□ 0.87
POLR1E-203ENST00000442009 HHIPL1Q96JK4 782 aa20.46■□□□□ 0.87
POLR1E-203ENST00000442009 GCNT4Q9P109 453 aa20.46■□□□□ 0.87
POLR1E-203ENST00000442009 MYO6Q9UM54 1294 aa20.46■□□□□ 0.87
POLR1E-203ENST00000442009 EVPLQ92817 2033 aa20.45■□□□□ 0.86
POLR1E-203ENST00000442009 ADCY3O60266 1144 aa20.45■□□□□ 0.86
POLR1E-203ENST00000442009 PLEKP08567 350 aaPredicted RBP20.45■□□□□ 0.86
POLR1E-203ENST00000442009 KRT13P13646 458 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms