RNA–Protein interactions for RNA: ENST00000434192.2

GTF2A1-202, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 1 (best) BASIC

Gene GTF2A1, Length 1,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-202ENST00000434192 STK38Q15208 465 aa7.8□□□□□ -1.16
GTF2A1-202ENST00000434192 NFKBIBQ15653 356 aa7.8□□□□□ -1.16
GTF2A1-202ENST00000434192 INF2Q27J81 1249 aa7.8□□□□□ -1.16
GTF2A1-202ENST00000434192 EARS2Q5JPH6 523 aaKnown RBP7.8□□□□□ -1.16
GTF2A1-202ENST00000434192 ANO1Q5XXA6 986 aa7.8□□□□□ -1.16
GTF2A1-202ENST00000434192 USP17L6PQ6QN14 398 aa7.8□□□□□ -1.16
GTF2A1-202ENST00000434192 RNF207Q6ZRF8 634 aa7.8□□□□□ -1.16
GTF2A1-202ENST00000434192 RIOX2Q8IUF8 465 aa7.8□□□□□ -1.16
GTF2A1-202ENST00000434192 FAM43AQ8N2R8 423 aa7.8□□□□□ -1.16
GTF2A1-202ENST00000434192 CHST13Q8NET6 341 aa7.8□□□□□ -1.16
GTF2A1-202ENST00000434192 TBCKQ8TEA7 893 aa7.8□□□□□ -1.16
GTF2A1-202ENST00000434192 CHAMP1Q96JM3 812 aa7.8□□□□□ -1.16
GTF2A1-202ENST00000434192 PGBD1Q96JS3 809 aa7.8□□□□□ -1.16
GTF2A1-202ENST00000434192 P2RX7Q99572 595 aaKnown RBP7.8□□□□□ -1.16
GTF2A1-202ENST00000434192 NAP1L4Q99733 375 aaKnown RBP7.8□□□□□ -1.16
GTF2A1-202ENST00000434192 PTPN18Q99952 460 aa7.8□□□□□ -1.16
GTF2A1-202ENST00000434192 TMPRSS13Q9BYE2 586 aa7.8□□□□□ -1.16
GTF2A1-202ENST00000434192 FTOQ9C0B1 505 aaKnown RBP eCLIP7.8□□□□□ -1.16
GTF2A1-202ENST00000434192 MAF1Q9H063 256 aa7.8□□□□□ -1.16
GTF2A1-202ENST00000434192 SPATC1LQ9H0A9 340 aa7.8□□□□□ -1.16
GTF2A1-202ENST00000434192 R3HDMLQ9H3Y0 253 aa7.8□□□□□ -1.16
GTF2A1-202ENST00000434192 MAP3K20Q9NYL2 800 aaKnown RBP7.8□□□□□ -1.16
GTF2A1-202ENST00000434192 RTEL1Q9NZ71 1219 aa7.8□□□□□ -1.16
GTF2A1-202ENST00000434192 BTBD7Q9P203 1132 aa7.8□□□□□ -1.16
GTF2A1-202ENST00000434192 DOCK5Q9H7D0 1870 aa7.79□□□□□ -1.16
GTF2A1-202ENST00000434192 GSC2O15499 205 aa7.79□□□□□ -1.16
GTF2A1-202ENST00000434192 CNMDO75829 334 aa7.79□□□□□ -1.16
GTF2A1-202ENST00000434192 IGHA2P01877 340 aa7.79□□□□□ -1.16
GTF2A1-202ENST00000434192 GCFC2P16383 781 aaKnown RBP7.79□□□□□ -1.16
GTF2A1-202ENST00000434192 ATP2B1P20020 1258 aa7.79□□□□□ -1.16
GTF2A1-202ENST00000434192 HOXA13P31271 388 aaPredicted RBP7.79□□□□□ -1.16
GTF2A1-202ENST00000434192 SSTR4P31391 388 aa7.79□□□□□ -1.16
GTF2A1-202ENST00000434192 SREBF1P36956 1147 aa7.79□□□□□ -1.16
GTF2A1-202ENST00000434192 TOB1P50616 345 aaPredicted RBP7.79□□□□□ -1.16
GTF2A1-202ENST00000434192 CCNA1P78396 465 aa7.79□□□□□ -1.16
GTF2A1-202ENST00000434192 SF3A1Q15459 793 aaKnown RBP7.79□□□□□ -1.16
GTF2A1-202ENST00000434192 TAF1CQ15572 869 aaPredicted RBP7.79□□□□□ -1.16
GTF2A1-202ENST00000434192 PKN2Q16513 984 aaKnown RBP7.79□□□□□ -1.16
GTF2A1-202ENST00000434192 FAM110CQ1W6H9 321 aa7.79□□□□□ -1.16
GTF2A1-202ENST00000434192 LETM2Q2VYF4 491 aa7.79□□□□□ -1.16
GTF2A1-202ENST00000434192 MUM1L1Q5H9M0 696 aa7.79□□□□□ -1.16
GTF2A1-202ENST00000434192 NSMFQ6X4W1 530 aa7.79□□□□□ -1.16
GTF2A1-202ENST00000434192 SLC30A10Q6XR72 485 aa7.79□□□□□ -1.16
GTF2A1-202ENST00000434192 BEND4Q6ZU67 534 aa7.79□□□□□ -1.16
GTF2A1-202ENST00000434192 LEO1Q8WVC0 666 aaPredicted RBP7.79□□□□□ -1.16
GTF2A1-202ENST00000434192 CLEC4DQ8WXI8 215 aa7.79□□□□□ -1.16
GTF2A1-202ENST00000434192 CCDC74AQ96AQ1 378 aa7.79□□□□□ -1.16
GTF2A1-202ENST00000434192 ERO1AQ96HE7 468 aa7.79□□□□□ -1.16
GTF2A1-202ENST00000434192 CYP4F12Q9HCS2 524 aa7.79□□□□□ -1.16
GTF2A1-202ENST00000434192 CLIC4Q9Y696 253 aa7.79□□□□□ -1.16
GTF2A1-202ENST00000434192 WDR81Q562E7 1941 aa7.79□□□□□ -1.16
GTF2A1-202ENST00000434192 HTTP42858 3142 aa7.79□□□□□ -1.16
GTF2A1-202ENST00000434192 TNRC18O15417 2968 aaPredicted RBP7.79□□□□□ -1.16
GTF2A1-202ENST00000434192 FRMPD4Q14CM0 1322 aa7.78□□□□□ -1.16
GTF2A1-202ENST00000434192 ADGRA2Q96PE1 1338 aa7.78□□□□□ -1.16
GTF2A1-202ENST00000434192 GOLGA6L4A6NEF3 574 aa7.78□□□□□ -1.16
GTF2A1-202ENST00000434192 LAD1O00515 517 aa7.78□□□□□ -1.16
GTF2A1-202ENST00000434192 SPTLC2O15270 562 aa7.78□□□□□ -1.16
GTF2A1-202ENST00000434192 NEMFO60524 1076 aa7.78□□□□□ -1.16
GTF2A1-202ENST00000434192 CCNT1O60563 726 aaKnown RBP7.78□□□□□ -1.16
GTF2A1-202ENST00000434192 PPP6R2O75170 966 aa7.78□□□□□ -1.16
GTF2A1-202ENST00000434192 GADD45BO75293 160 aaPredicted RBP7.78□□□□□ -1.16
GTF2A1-202ENST00000434192 MBD3O95983 291 aa7.78□□□□□ -1.16
GTF2A1-202ENST00000434192 TGFB1P01137 390 aa7.78□□□□□ -1.16
GTF2A1-202ENST00000434192 DRD2P14416 443 aa7.78□□□□□ -1.16
GTF2A1-202ENST00000434192 MCM7P33993 719 aa7.78□□□□□ -1.16
GTF2A1-202ENST00000434192 ME1P48163 572 aa7.78□□□□□ -1.16
GTF2A1-202ENST00000434192 RPS6P62753 249 aaKnown RBP7.78□□□□□ -1.16
GTF2A1-202ENST00000434192 SGO2Q562F6 1265 aa7.78□□□□□ -1.16
GTF2A1-202ENST00000434192 EXOSC6Q5RKV6 272 aaKnown RBP7.78□□□□□ -1.16
GTF2A1-202ENST00000434192 FBXO46Q6PJ61 603 aaPredicted RBP7.78□□□□□ -1.16
GTF2A1-202ENST00000434192 MOXD1Q6UVY6 613 aa7.78□□□□□ -1.16
GTF2A1-202ENST00000434192 ANKRD35Q8N283 1001 aa7.78□□□□□ -1.16
GTF2A1-202ENST00000434192 LINC00301Q8NCQ3 95 aa7.78□□□□□ -1.16
GTF2A1-202ENST00000434192 SHCBP1Q8NEM2 672 aa7.78□□□□□ -1.16
GTF2A1-202ENST00000434192 FAM83CQ9BQN1 747 aa7.78□□□□□ -1.16
GTF2A1-202ENST00000434192 MOV10L1Q9BXT6 1211 aaKnown RBP7.78□□□□□ -1.16
GTF2A1-202ENST00000434192 MROH8Q9H579 483 aa7.78□□□□□ -1.16
GTF2A1-202ENST00000434192 TXNRD2Q9NNW7 524 aa7.78□□□□□ -1.16
GTF2A1-202ENST00000434192 A1CFQ9NQ94 594 aaKnown RBP7.78□□□□□ -1.16
GTF2A1-202ENST00000434192 CYP39A1Q9NYL5 469 aa7.78□□□□□ -1.16
GTF2A1-202ENST00000434192 RBPJLQ9UBG7 517 aa7.78□□□□□ -1.16
GTF2A1-202ENST00000434192 MORF4L1Q9UBU8 362 aa7.78□□□□□ -1.16
GTF2A1-202ENST00000434192 RIPK3Q9Y572 518 aa7.78□□□□□ -1.16
GTF2A1-202ENST00000434192 PCDHB6Q9Y5E3 794 aa7.78□□□□□ -1.16
GTF2A1-202ENST00000434192 MORC2Q9Y6X9 1032 aaPredicted RBP7.78□□□□□ -1.16
GTF2A1-202ENST00000434192 RPTORQ8N122 1335 aa7.78□□□□□ -1.16
GTF2A1-202ENST00000434192 CCDC85CA6NKD9 419 aa7.77□□□□□ -1.17
GTF2A1-202ENST00000434192 TLR2O60603 784 aa7.77□□□□□ -1.17
GTF2A1-202ENST00000434192 PRPF40AO75400 957 aaKnown RBP7.77□□□□□ -1.17
GTF2A1-202ENST00000434192 TDP2O95551 362 aa7.77□□□□□ -1.17
GTF2A1-202ENST00000434192 OR52Z1P0C646 297 aa7.77□□□□□ -1.17
GTF2A1-202ENST00000434192 ERCC3P19447 782 aa7.77□□□□□ -1.17
GTF2A1-202ENST00000434192 MAOBP27338 520 aa7.77□□□□□ -1.17
GTF2A1-202ENST00000434192 MAP4P27816 1152 aaKnown RBP7.77□□□□□ -1.17
GTF2A1-202ENST00000434192 UBE2HP62256 183 aa7.77□□□□□ -1.17
GTF2A1-202ENST00000434192 ATP2C1P98194 919 aaPredicted RBP7.77□□□□□ -1.17
GTF2A1-202ENST00000434192 SETQ01105 290 aaPredicted RBP7.77□□□□□ -1.17
GTF2A1-202ENST00000434192 SP3Q02447 781 aa7.77□□□□□ -1.17
GTF2A1-202ENST00000434192 KCTD2Q14681 263 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms