RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 SAE1Q9UBE0 346 aaPredicted RBP6.71□□□□□ -1.34
LINC00458-202ENST00000427299 DENND2AQ9ULE3 1009 aa6.71□□□□□ -1.34
LINC00458-202ENST00000427299 ZBTB48P10074 688 aaPredicted RBP6.7□□□□□ -1.34
LINC00458-202ENST00000427299 CANXP27824 592 aaKnown RBP6.7□□□□□ -1.34
LINC00458-202ENST00000427299 IRF9Q00978 393 aa6.7□□□□□ -1.34
LINC00458-202ENST00000427299 TMEM177Q53S58 311 aa6.7□□□□□ -1.34
LINC00458-202ENST00000427299 FAM111BQ6SJ93 734 aa6.7□□□□□ -1.34
LINC00458-202ENST00000427299 OTOP1Q7RTM1 612 aa6.7□□□□□ -1.34
LINC00458-202ENST00000427299 ANKRD53Q8N9V6 530 aa6.7□□□□□ -1.34
LINC00458-202ENST00000427299 OR5AN1Q8NGI8 311 aa6.7□□□□□ -1.34
LINC00458-202ENST00000427299 SH3TC2Q8TF17 1288 aa6.7□□□□□ -1.34
LINC00458-202ENST00000427299 GCDHQ92947 438 aaPredicted RBP6.7□□□□□ -1.34
LINC00458-202ENST00000427299 NKD2Q969F2 451 aaPredicted RBP6.7□□□□□ -1.34
LINC00458-202ENST00000427299 RPL10LQ96L21 214 aaKnown RBP6.7□□□□□ -1.34
LINC00458-202ENST00000427299 MAGEL2Q9UJ55 1249 aa6.7□□□□□ -1.34
LINC00458-202ENST00000427299 RBM8AQ9Y5S9 174 aaKnown RBP6.7□□□□□ -1.34
LINC00458-202ENST00000427299 MRC2Q9UBG0 1479 aa6.7□□□□□ -1.34
LINC00458-202ENST00000427299 EPRSP07814 1512 aaKnown RBP6.7□□□□□ -1.34
LINC00458-202ENST00000427299 TCRBV16S1A1N1A0A5B0 115 aa6.69□□□□□ -1.34
LINC00458-202ENST00000427299 TRAF5O00463 557 aa6.69□□□□□ -1.34
LINC00458-202ENST00000427299 NPTXRO95502 500 aa6.69□□□□□ -1.34
LINC00458-202ENST00000427299 PRLP01236 227 aa6.69□□□□□ -1.34
LINC00458-202ENST00000427299 ANTXR2P58335 489 aa6.69□□□□□ -1.34
LINC00458-202ENST00000427299 BPIFB4P59827 614 aa6.69□□□□□ -1.34
LINC00458-202ENST00000427299 TCIRG1Q13488 830 aa6.69□□□□□ -1.34
LINC00458-202ENST00000427299 SQSTM1Q13501 440 aa6.69□□□□□ -1.34
LINC00458-202ENST00000427299 ELAVL1Q15717 326 aaKnown RBP6.69□□□□□ -1.34
LINC00458-202ENST00000427299 C2orf27AQ580R0 203 aa6.69□□□□□ -1.34
LINC00458-202ENST00000427299 CC2D1AQ6P1N0 951 aaPredicted RBP6.69□□□□□ -1.34
LINC00458-202ENST00000427299 ZNF662Q6ZS27 426 aa6.69□□□□□ -1.34
LINC00458-202ENST00000427299 TMEM260Q9NX78 707 aa6.69□□□□□ -1.34
LINC00458-202ENST00000427299 SFMBT1Q9UHJ3 866 aa6.69□□□□□ -1.34
LINC00458-202ENST00000427299 MAGI3Q5TCQ9 1506 aa6.69□□□□□ -1.34
LINC00458-202ENST00000427299 KDM5BQ9UGL1 1544 aa6.69□□□□□ -1.34
LINC00458-202ENST00000427299 EIF4G3O43432 1585 aaKnown RBP6.69□□□□□ -1.34
LINC00458-202ENST00000427299 UBE2QL1A1L167 161 aa6.68□□□□□ -1.34
LINC00458-202ENST00000427299 TMEM191CA6NGB0 347 aa6.68□□□□□ -1.34
LINC00458-202ENST00000427299 ANP32CO43423 234 aa6.68□□□□□ -1.34
LINC00458-202ENST00000427299 KCNQ2O43526 872 aa6.68□□□□□ -1.34
LINC00458-202ENST00000427299 APPP05067 770 aa6.68□□□□□ -1.34
LINC00458-202ENST00000427299 FNTBP49356 437 aa6.68□□□□□ -1.34
LINC00458-202ENST00000427299 RGS3P49796 1198 aa6.68□□□□□ -1.34
LINC00458-202ENST00000427299 RABGGTBP53611 331 aa6.68□□□□□ -1.34
LINC00458-202ENST00000427299 GAGE13Q4V321 117 aa6.68□□□□□ -1.34
LINC00458-202ENST00000427299 LAIR1Q6GTX8 287 aa6.68□□□□□ -1.34
LINC00458-202ENST00000427299 HTR3DQ70Z44 454 aa6.68□□□□□ -1.34
LINC00458-202ENST00000427299 MRGPREQ86SM8 312 aa6.68□□□□□ -1.34
LINC00458-202ENST00000427299 C2orf69Q8N8R5 385 aa6.68□□□□□ -1.34
LINC00458-202ENST00000427299 IGSF22Q8N9C0 903 aa6.68□□□□□ -1.34
LINC00458-202ENST00000427299 THAP3Q8WTV1 239 aaPredicted RBP6.68□□□□□ -1.34
LINC00458-202ENST00000427299 BOCQ9BWV1 1114 aa6.68□□□□□ -1.34
LINC00458-202ENST00000427299 GPR87Q9BY21 358 aa6.68□□□□□ -1.34
LINC00458-202ENST00000427299 NRDE2Q9H7Z3 1164 aa6.68□□□□□ -1.34
LINC00458-202ENST00000427299 IL23AQ9NPF7 189 aa6.68□□□□□ -1.34
LINC00458-202ENST00000427299 IFT140Q96RY7 1462 aa6.67□□□□□ -1.34
LINC00458-202ENST00000427299 PCSK5Q92824 1860 aa6.67□□□□□ -1.34
LINC00458-202ENST00000427299 KLRG2A4D1S0 409 aaPredicted RBP6.67□□□□□ -1.34
LINC00458-202ENST00000427299 RPS6KA4O75676 772 aa6.67□□□□□ -1.34
LINC00458-202ENST00000427299 HSD3B2P26439 372 aa6.67□□□□□ -1.34
LINC00458-202ENST00000427299 SLC6A3Q01959 620 aa6.67□□□□□ -1.34
LINC00458-202ENST00000427299 ROM1Q03395 351 aa6.67□□□□□ -1.34
LINC00458-202ENST00000427299 DGKDQ16760 1214 aa6.67□□□□□ -1.34
LINC00458-202ENST00000427299 BRAPQ7Z569 592 aa6.67□□□□□ -1.34
LINC00458-202ENST00000427299 FGD2Q7Z6J4 655 aa6.67□□□□□ -1.34
LINC00458-202ENST00000427299 GSPT2Q8IYD1 628 aaKnown RBP6.67□□□□□ -1.34
LINC00458-202ENST00000427299 E2F7Q96AV8 911 aa6.67□□□□□ -1.34
LINC00458-202ENST00000427299 XDHP47989 1333 aa6.67□□□□□ -1.34
LINC00458-202ENST00000427299 ROCK1Q13464 1354 aa6.67□□□□□ -1.34
LINC00458-202ENST00000427299 PTGS2P35354 604 aa6.66□□□□□ -1.34
LINC00458-202ENST00000427299 MECP2P51608 486 aaKnown RBP6.66□□□□□ -1.34
LINC00458-202ENST00000427299 SMAD3P84022 425 aaKnown RBP6.66□□□□□ -1.34
LINC00458-202ENST00000427299 PLEKHG4Q58EX7 1191 aa6.66□□□□□ -1.34
LINC00458-202ENST00000427299 C1QL3Q5VWW1 255 aa6.66□□□□□ -1.34
LINC00458-202ENST00000427299 RHOUQ7L0Q8 258 aa6.66□□□□□ -1.34
LINC00458-202ENST00000427299 CLEC14AQ86T13 490 aa6.66□□□□□ -1.34
LINC00458-202ENST00000427299 TCF25Q9BQ70 676 aa6.66□□□□□ -1.34
LINC00458-202ENST00000427299 TRPS1Q9UHF7 1281 aa6.66□□□□□ -1.34
LINC00458-202ENST00000427299 CNTLNQ9NXG0 1405 aa6.66□□□□□ -1.34
LINC00458-202ENST00000427299 CDK13Q14004 1512 aaKnown RBP6.66□□□□□ -1.34
LINC00458-202ENST00000427299 PROZP22891 400 aa6.65□□□□□ -1.34
LINC00458-202ENST00000427299 ADRA1BP35368 520 aa6.65□□□□□ -1.34
LINC00458-202ENST00000427299 DPY19L2P1Q6NXN4 242 aa6.65□□□□□ -1.34
LINC00458-202ENST00000427299 SLC25A43Q8WUT9 341 aaPredicted RBP6.65□□□□□ -1.34
LINC00458-202ENST00000427299 HAS1Q92839 578 aa6.65□□□□□ -1.34
LINC00458-202ENST00000427299 LENG9Q96B70 501 aa6.65□□□□□ -1.34
LINC00458-202ENST00000427299 MAML3Q96JK9 1138 aa6.65□□□□□ -1.34
LINC00458-202ENST00000427299 MRPL4Q9BYD3 311 aaKnown RBP6.65□□□□□ -1.34
LINC00458-202ENST00000427299 HAPLN2Q9GZV7 340 aa6.65□□□□□ -1.34
LINC00458-202ENST00000427299 TRIM39Q9HCM9 518 aa6.65□□□□□ -1.34
LINC00458-202ENST00000427299 KCMF1Q9P0J7 381 aa6.65□□□□□ -1.34
LINC00458-202ENST00000427299 TNFRSF18Q9Y5U5 241 aa6.65□□□□□ -1.34
LINC00458-202ENST00000427299 SHANK2Q9UPX8 1470 aa6.65□□□□□ -1.35
LINC00458-202ENST00000427299 CDC42BPAQ5VT25 1732 aa6.64□□□□□ -1.35
LINC00458-202ENST00000427299 GOLGA8BA8MQT2 603 aa6.64□□□□□ -1.35
LINC00458-202ENST00000427299 DVL2O14641 736 aa6.64□□□□□ -1.35
LINC00458-202ENST00000427299 FAM20BO75063 409 aa6.64□□□□□ -1.35
LINC00458-202ENST00000427299 TOX4O94842 621 aa6.64□□□□□ -1.35
LINC00458-202ENST00000427299 VSIG10L2P0DP72 767 aa6.64□□□□□ -1.35
LINC00458-202ENST00000427299 BMP5P22003 454 aa6.64□□□□□ -1.35
LINC00458-202ENST00000427299 FSTL1Q12841 308 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms