RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 CDK11BP21127 795 aaKnown RBP6.21□□□□□ -1.42
HMGB1P49-201ENST00000418882 CDSNQ15517 529 aa6.21□□□□□ -1.42
HMGB1P49-201ENST00000418882 CBARPQ8N350 705 aaPredicted RBP6.21□□□□□ -1.42
HMGB1P49-201ENST00000418882 CNTD1Q8N815 330 aa6.21□□□□□ -1.42
HMGB1P49-201ENST00000418882 PRPF38AQ8NAV1 312 aaKnown RBP6.21□□□□□ -1.42
HMGB1P49-201ENST00000418882 GIMAP8Q8ND71 665 aaPredicted RBP6.21□□□□□ -1.42
HMGB1P49-201ENST00000418882 TSPEARQ8WU66 669 aa6.21□□□□□ -1.42
HMGB1P49-201ENST00000418882 GCDHQ92947 438 aaPredicted RBP6.21□□□□□ -1.42
HMGB1P49-201ENST00000418882 AHCYL2Q96HN2 611 aaKnown RBP6.21□□□□□ -1.42
HMGB1P49-201ENST00000418882 OR14A2Q96R54 314 aa6.21□□□□□ -1.42
HMGB1P49-201ENST00000418882 QRSL1Q9H0R6 528 aaKnown RBP6.21□□□□□ -1.42
HMGB1P49-201ENST00000418882 SLC6A15Q9H2J7 730 aa6.21□□□□□ -1.42
HMGB1P49-201ENST00000418882 PCDH12Q9NPG4 1184 aa6.21□□□□□ -1.42
HMGB1P49-201ENST00000418882 SMPD4Q9NXE4 827 aa6.21□□□□□ -1.42
HMGB1P49-201ENST00000418882 ING3Q9NXR8 418 aa6.21□□□□□ -1.42
HMGB1P49-201ENST00000418882 MCM8Q9UJA3 840 aa6.21□□□□□ -1.42
HMGB1P49-201ENST00000418882 CNOT11Q9UKZ1 510 aaKnown RBP6.21□□□□□ -1.42
HMGB1P49-201ENST00000418882 COL4A3BPQ9Y5P4 624 aa6.21□□□□□ -1.42
HMGB1P49-201ENST00000418882 CDY2AQ9Y6F7 541 aa6.21□□□□□ -1.42
HMGB1P49-201ENST00000418882 A0A1W2PR48 441 aa6.2□□□□□ -1.42
HMGB1P49-201ENST00000418882 GOLGA8AA7E2F4 631 aa6.2□□□□□ -1.42
HMGB1P49-201ENST00000418882 GOLGA8BA8MQT2 603 aa6.2□□□□□ -1.42
HMGB1P49-201ENST00000418882 TMEM127O75204 238 aa6.2□□□□□ -1.42
HMGB1P49-201ENST00000418882 RAD17O75943 681 aa6.2□□□□□ -1.42
HMGB1P49-201ENST00000418882 CFBP00751 764 aa6.2□□□□□ -1.42
HMGB1P49-201ENST00000418882 CPEP16870 476 aa6.2□□□□□ -1.42
HMGB1P49-201ENST00000418882 MAGEA10P43363 369 aaPredicted RBP6.2□□□□□ -1.42
HMGB1P49-201ENST00000418882 SESN2P58004 480 aaPredicted RBP6.2□□□□□ -1.42
HMGB1P49-201ENST00000418882 MGAT5Q09328 741 aa6.2□□□□□ -1.42
HMGB1P49-201ENST00000418882 FOXL1Q12952 345 aa6.2□□□□□ -1.42
HMGB1P49-201ENST00000418882 FAM50AQ14320 339 aaKnown RBP6.2□□□□□ -1.42
HMGB1P49-201ENST00000418882 UGT8Q16880 541 aa6.2□□□□□ -1.42
HMGB1P49-201ENST00000418882 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.2□□□□□ -1.42
HMGB1P49-201ENST00000418882 Q6ZSN1 163 aa6.2□□□□□ -1.42
HMGB1P49-201ENST00000418882 KCNK18Q7Z418 384 aa6.2□□□□□ -1.42
HMGB1P49-201ENST00000418882 PRRT2Q7Z6L0 340 aaPredicted RBP6.2□□□□□ -1.42
HMGB1P49-201ENST00000418882 RABGGTAQ92696 567 aa6.2□□□□□ -1.42
HMGB1P49-201ENST00000418882 TMEM176AQ96HP8 235 aa6.2□□□□□ -1.42
HMGB1P49-201ENST00000418882 WNT8AQ9H1J5 351 aa6.2□□□□□ -1.42
HMGB1P49-201ENST00000418882 SLC5A4Q9NY91 659 aa6.2□□□□□ -1.42
HMGB1P49-201ENST00000418882 DPP7Q9UHL4 492 aa6.2□□□□□ -1.42
HMGB1P49-201ENST00000418882 SLC30A1Q9Y6M5 507 aa6.2□□□□□ -1.42
HMGB1P49-201ENST00000418882 K7ESF4 209 aa6.19□□□□□ -1.42
HMGB1P49-201ENST00000418882 ZNF623O75123 536 aa6.19□□□□□ -1.42
HMGB1P49-201ENST00000418882 VSIG10L2P0DP72 767 aa6.19□□□□□ -1.42
HMGB1P49-201ENST00000418882 KIR2DL3P43628 341 aa6.19□□□□□ -1.42
HMGB1P49-201ENST00000418882 GPR15P49685 360 aa6.19□□□□□ -1.42
HMGB1P49-201ENST00000418882 CCT2P78371 535 aaKnown RBP6.19□□□□□ -1.42
HMGB1P49-201ENST00000418882 ADAM17P78536 824 aa6.19□□□□□ -1.42
HMGB1P49-201ENST00000418882 SRSF2Q01130 221 aaKnown RBP6.19□□□□□ -1.42
HMGB1P49-201ENST00000418882 MTMR1Q13613 665 aa6.19□□□□□ -1.42
HMGB1P49-201ENST00000418882 R3HDM1Q15032 1099 aaKnown RBP6.19□□□□□ -1.42
HMGB1P49-201ENST00000418882 ZNF585AQ6P3V2 769 aa6.19□□□□□ -1.42
HMGB1P49-201ENST00000418882 UNC5BQ8IZJ1 945 aa6.19□□□□□ -1.42
HMGB1P49-201ENST00000418882 OR14C36Q8NHC7 312 aa6.19□□□□□ -1.42
HMGB1P49-201ENST00000418882 LPPQ93052 612 aa6.19□□□□□ -1.42
HMGB1P49-201ENST00000418882 ACAP3Q96P50 834 aa6.19□□□□□ -1.42
HMGB1P49-201ENST00000418882 CCDC8Q9H0W5 538 aaPredicted RBP6.19□□□□□ -1.42
HMGB1P49-201ENST00000418882 CCM2LQ9NUG4 571 aaPredicted RBP6.19□□□□□ -1.42
HMGB1P49-201ENST00000418882 SYNPO2Q9UMS6 1093 aa6.19□□□□□ -1.42
HMGB1P49-201ENST00000418882 PMS2P1A4D2B8 440 aa6.18□□□□□ -1.42
HMGB1P49-201ENST00000418882 KATNA1O75449 491 aa6.18□□□□□ -1.42
HMGB1P49-201ENST00000418882 STC2O76061 302 aa6.18□□□□□ -1.42
HMGB1P49-201ENST00000418882 FSBPO95073 299 aa6.18□□□□□ -1.42
HMGB1P49-201ENST00000418882 ZNF20P17024 532 aa6.18□□□□□ -1.42
HMGB1P49-201ENST00000418882 IARSP41252 1262 aaKnown RBP6.18□□□□□ -1.42
HMGB1P49-201ENST00000418882 CDK17Q00537 523 aa6.18□□□□□ -1.42
HMGB1P49-201ENST00000418882 INAVAQ3KP66 663 aa6.18□□□□□ -1.42
HMGB1P49-201ENST00000418882 TOR2AQ5JU69 321 aa6.18□□□□□ -1.42
HMGB1P49-201ENST00000418882 ERICH6BQ5W0A0 696 aa6.18□□□□□ -1.42
HMGB1P49-201ENST00000418882 ABHD15Q6UXT9 468 aa6.18□□□□□ -1.42
HMGB1P49-201ENST00000418882 NECAB2Q7Z6G3 386 aa6.18□□□□□ -1.42
HMGB1P49-201ENST00000418882 TTC9BQ8N6N2 239 aa6.18□□□□□ -1.42
HMGB1P49-201ENST00000418882 UIMC1Q96RL1 719 aa6.18□□□□□ -1.42
HMGB1P49-201ENST00000418882 C14orf93Q9H972 538 aaKnown RBP6.18□□□□□ -1.42
HMGB1P49-201ENST00000418882 PLA2G3Q9NZ20 509 aa6.18□□□□□ -1.42
HMGB1P49-201ENST00000418882 KCNG1Q9UIX4 513 aa6.18□□□□□ -1.42
HMGB1P49-201ENST00000418882 ANKRD62A6NC57 917 aa6.17□□□□□ -1.42
HMGB1P49-201ENST00000418882 ALDH1A2O94788 518 aa6.17□□□□□ -1.42
HMGB1P49-201ENST00000418882 MSX2P35548 267 aaPredicted RBP6.17□□□□□ -1.42
HMGB1P49-201ENST00000418882 MUM1Q2TAK8 710 aa6.17□□□□□ -1.42
HMGB1P49-201ENST00000418882 SPATS1Q496A3 300 aa6.17□□□□□ -1.42
HMGB1P49-201ENST00000418882 CCDC178Q5BJE1 867 aa6.17□□□□□ -1.42
HMGB1P49-201ENST00000418882 RPUSD2Q8IZ73 545 aaKnown RBP6.17□□□□□ -1.42
HMGB1P49-201ENST00000418882 LILRA3Q8N6C8 439 aaPredicted RBP6.17□□□□□ -1.42
HMGB1P49-201ENST00000418882 KRTAP9-3Q9BYQ3 159 aa6.17□□□□□ -1.42
HMGB1P49-201ENST00000418882 ENKD1Q9H0I2 346 aa6.17□□□□□ -1.42
HMGB1P49-201ENST00000418882 IL23AQ9NPF7 189 aa6.17□□□□□ -1.42
HMGB1P49-201ENST00000418882 A0A1W2PRX2 142 aa6.16□□□□□ -1.42
HMGB1P49-201ENST00000418882 UBE2QL1A1L167 161 aa6.16□□□□□ -1.42
HMGB1P49-201ENST00000418882 MAFGO15525 162 aa6.16□□□□□ -1.42
HMGB1P49-201ENST00000418882 DAPK3O43293 454 aa6.16□□□□□ -1.42
HMGB1P49-201ENST00000418882 OSMP13725 252 aa6.16□□□□□ -1.42
HMGB1P49-201ENST00000418882 RPS19P39019 145 aaKnown RBP6.16□□□□□ -1.42
HMGB1P49-201ENST00000418882 MTNR1BP49286 362 aa6.16□□□□□ -1.42
HMGB1P49-201ENST00000418882 GUCY2FP51841 1108 aa6.16□□□□□ -1.42
HMGB1P49-201ENST00000418882 MRPS9P82933 396 aaKnown RBP6.16□□□□□ -1.42
HMGB1P49-201ENST00000418882 KLF1Q13351 362 aaPredicted RBP6.16□□□□□ -1.42
HMGB1P49-201ENST00000418882 SPIDRQ14159 915 aa6.16□□□□□ -1.42
HMGB1P49-201ENST00000418882 GRM7Q14831 915 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms