RNA–Protein interactions for RNA: ENST00000417946.5

CPS1-202, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 3

Gene CPS1, Length 699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-202ENST00000417946 GLG1Q92896 1179 aa7.56□□□□□ -1.2
CPS1-202ENST00000417946 CTAGE1Q96RT6 745 aa7.56□□□□□ -1.2
CPS1-202ENST00000417946 KIFC3Q9BVG8 833 aa7.56□□□□□ -1.2
CPS1-202ENST00000417946 TIPINQ9BVW5 301 aa7.56□□□□□ -1.2
CPS1-202ENST00000417946 POLR3FQ9H1D9 316 aaPredicted RBP7.56□□□□□ -1.2
CPS1-202ENST00000417946 ST6GALNAC4Q9H4F1 302 aa7.56□□□□□ -1.2
CPS1-202ENST00000417946 AZI2Q9H6S1 392 aa7.56□□□□□ -1.2
CPS1-202ENST00000417946 ATP6V0A4Q9HBG4 840 aa7.56□□□□□ -1.2
CPS1-202ENST00000417946 PARVGQ9HBI0 331 aa7.56□□□□□ -1.2
CPS1-202ENST00000417946 ERAP1Q9NZ08 941 aa7.56□□□□□ -1.2
CPS1-202ENST00000417946 RWDD2AQ9UIY3 292 aa7.56□□□□□ -1.2
CPS1-202ENST00000417946 COL4A3BPQ9Y5P4 624 aa7.56□□□□□ -1.2
CPS1-202ENST00000417946 COL1A2P08123 1366 aa7.56□□□□□ -1.2
CPS1-202ENST00000417946 MBLAC1A4D2B0 266 aaPredicted RBP7.55□□□□□ -1.2
CPS1-202ENST00000417946 H3BRB1 525 aa7.55□□□□□ -1.2
CPS1-202ENST00000417946 TGFB1I1O43294 461 aa7.55□□□□□ -1.2
CPS1-202ENST00000417946 HBP1O60381 514 aa7.55□□□□□ -1.2
CPS1-202ENST00000417946 FAM13AO94988 1023 aa7.55□□□□□ -1.2
CPS1-202ENST00000417946 KRT18P05783 430 aaKnown RBP7.55□□□□□ -1.2
CPS1-202ENST00000417946 PLS3P13797 630 aa7.55□□□□□ -1.2
CPS1-202ENST00000417946 INSRRP14616 1297 aa7.55□□□□□ -1.2
CPS1-202ENST00000417946 GLRA2P23416 452 aa7.55□□□□□ -1.2
CPS1-202ENST00000417946 CCNE1P24864 410 aa7.55□□□□□ -1.2
CPS1-202ENST00000417946 NPTX2P47972 431 aa7.55□□□□□ -1.2
CPS1-202ENST00000417946 RPIAP49247 311 aa7.55□□□□□ -1.2
CPS1-202ENST00000417946 MRE11P49959 708 aa7.55□□□□□ -1.2
CPS1-202ENST00000417946 MYL5Q02045 173 aa7.55□□□□□ -1.2
CPS1-202ENST00000417946 PAK1Q13153 545 aa7.55□□□□□ -1.2
CPS1-202ENST00000417946 CAPSQ13938 189 aa7.55□□□□□ -1.2
CPS1-202ENST00000417946 DGKDQ16760 1214 aa7.55□□□□□ -1.2
CPS1-202ENST00000417946 PUS10Q3MIT2 529 aaKnown RBP7.55□□□□□ -1.2
CPS1-202ENST00000417946 ZC2HC1CQ53FD0 456 aaPredicted RBP7.55□□□□□ -1.2
CPS1-202ENST00000417946 ANKRD40Q6AI12 368 aa7.55□□□□□ -1.2
CPS1-202ENST00000417946 KLHL10Q6JEL2 608 aa7.55□□□□□ -1.2
CPS1-202ENST00000417946 FOXR2Q6PJQ5 311 aa7.55□□□□□ -1.2
CPS1-202ENST00000417946 MAEAQ7L5Y9 396 aa7.55□□□□□ -1.2
CPS1-202ENST00000417946 OTUD6AQ7L8S5 288 aa7.55□□□□□ -1.2
CPS1-202ENST00000417946 ZNF720Q7Z2F6 126 aa7.55□□□□□ -1.2
CPS1-202ENST00000417946 KSR1Q8IVT5 923 aa7.55□□□□□ -1.2
CPS1-202ENST00000417946 TMEM161BQ8NDZ6 487 aa7.55□□□□□ -1.2
CPS1-202ENST00000417946 MCPH1Q8NEM0 835 aa7.55□□□□□ -1.2
CPS1-202ENST00000417946 ZNF507Q8TCN5 953 aa7.55□□□□□ -1.2
CPS1-202ENST00000417946 RAET1EQ8TD07 263 aa7.55□□□□□ -1.2
CPS1-202ENST00000417946 LMBR1Q8WVP7 490 aa7.55□□□□□ -1.2
CPS1-202ENST00000417946 SPIRE2Q8WWL2 714 aa7.55□□□□□ -1.2
CPS1-202ENST00000417946 P2RX5Q93086 422 aa7.55□□□□□ -1.2
CPS1-202ENST00000417946 TMEM143Q96AN5 459 aa7.55□□□□□ -1.2
CPS1-202ENST00000417946 DHTKD1Q96HY7 919 aaPredicted RBP7.55□□□□□ -1.2
CPS1-202ENST00000417946 TUT1Q9H6E5 874 aaKnown RBP7.55□□□□□ -1.2
CPS1-202ENST00000417946 SAMSN1Q9NSI8 373 aaKnown RBP7.55□□□□□ -1.2
CPS1-202ENST00000417946 NRBP2Q9NSY0 501 aa7.55□□□□□ -1.2
CPS1-202ENST00000417946 INTS13Q9NVM9 706 aa7.55□□□□□ -1.2
CPS1-202ENST00000417946 FANCLQ9NW38 375 aa7.55□□□□□ -1.2
CPS1-202ENST00000417946 ARHGAP28Q9P2N2 729 aa7.55□□□□□ -1.2
CPS1-202ENST00000417946 SEL1LQ9UBV2 794 aa7.55□□□□□ -1.2
CPS1-202ENST00000417946 PTPN22Q9Y2R2 807 aa7.55□□□□□ -1.2
CPS1-202ENST00000417946 NFE2L3Q9Y4A8 694 aa7.55□□□□□ -1.2
CPS1-202ENST00000417946 PPME1Q9Y570 386 aa7.55□□□□□ -1.2
CPS1-202ENST00000417946 TRIM17Q9Y577 477 aa7.55□□□□□ -1.2
CPS1-202ENST00000417946 GRIN2DO15399 1336 aa7.54□□□□□ -1.2
CPS1-202ENST00000417946 UBE4BO95155 1302 aa7.54□□□□□ -1.2
CPS1-202ENST00000417946 TISP43B9A030 160 aa7.54□□□□□ -1.2
CPS1-202ENST00000417946 EIF3DO15371 548 aaKnown RBP eCLIP7.54□□□□□ -1.2
CPS1-202ENST00000417946 SLC16A4O15374 487 aa7.54□□□□□ -1.2
CPS1-202ENST00000417946 PRPF6O94906 941 aaKnown RBP7.54□□□□□ -1.2
CPS1-202ENST00000417946 GJB1P08034 283 aa7.54□□□□□ -1.2
CPS1-202ENST00000417946 SMIM10L2AP0DMW4 78 aa7.54□□□□□ -1.2
CPS1-202ENST00000417946 SMIM10L2BP0DMW5 78 aa7.54□□□□□ -1.2
CPS1-202ENST00000417946 MAPTP10636 758 aaKnown RBP7.54□□□□□ -1.2
CPS1-202ENST00000417946 GRK4P32298 578 aa7.54□□□□□ -1.2
CPS1-202ENST00000417946 CPT1AP50416 773 aa7.54□□□□□ -1.2
CPS1-202ENST00000417946 CLCN3P51790 818 aa7.54□□□□□ -1.2
CPS1-202ENST00000417946 GTF2BQ00403 316 aa7.54□□□□□ -1.2
CPS1-202ENST00000417946 GRIK4Q16099 956 aa7.54□□□□□ -1.2
CPS1-202ENST00000417946 UVSSAQ2YD98 709 aa7.54□□□□□ -1.2
CPS1-202ENST00000417946 ZNF484Q5JVG2 852 aa7.54□□□□□ -1.2
CPS1-202ENST00000417946 ODR4Q5SWX8 454 aa7.54□□□□□ -1.2
CPS1-202ENST00000417946 FAM102BQ5T8I3 360 aa7.54□□□□□ -1.2
CPS1-202ENST00000417946 SPATA1Q5VX52 437 aa7.54□□□□□ -1.2
CPS1-202ENST00000417946 CDCA2Q69YH5 1023 aaPredicted RBP7.54□□□□□ -1.2
CPS1-202ENST00000417946 SLC39A4Q6P5W5 647 aa7.54□□□□□ -1.2
CPS1-202ENST00000417946 SARM1Q6SZW1 724 aa7.54□□□□□ -1.2
CPS1-202ENST00000417946 RUFY4Q6ZNE9 571 aa7.54□□□□□ -1.2
CPS1-202ENST00000417946 LIAT1Q6ZQX7 453 aa7.54□□□□□ -1.2
CPS1-202ENST00000417946 MYOCDQ8IZQ8 938 aa7.54□□□□□ -1.2
CPS1-202ENST00000417946 LRRC71Q8N4P6 559 aa7.54□□□□□ -1.2
CPS1-202ENST00000417946 MYCT1Q8N699 235 aa7.54□□□□□ -1.2
CPS1-202ENST00000417946 SH3TC2Q8TF17 1288 aa7.54□□□□□ -1.2
CPS1-202ENST00000417946 KIFAP3Q92845 792 aa7.54□□□□□ -1.2
CPS1-202ENST00000417946 DRC1Q96MC2 740 aa7.54□□□□□ -1.2
CPS1-202ENST00000417946 NTPCRQ9BSD7 190 aaKnown RBP7.54□□□□□ -1.2
CPS1-202ENST00000417946 CCDC113Q9H0I3 377 aa7.54□□□□□ -1.2
CPS1-202ENST00000417946 AP5M1Q9H0R1 490 aa7.54□□□□□ -1.2
CPS1-202ENST00000417946 UNC93B1Q9H1C4 597 aa7.54□□□□□ -1.2
CPS1-202ENST00000417946 ZHX3Q9H4I2 956 aa7.54□□□□□ -1.2
CPS1-202ENST00000417946 XPNPEP3Q9NQH7 507 aa7.54□□□□□ -1.2
CPS1-202ENST00000417946 PRDM10Q9NQV6 1147 aa7.54□□□□□ -1.2
CPS1-202ENST00000417946 DDX20Q9UHI6 824 aaKnown RBP7.54□□□□□ -1.2
CPS1-202ENST00000417946 ANK1P16157 1881 aa7.53□□□□□ -1.2
CPS1-202ENST00000417946 K7ENM7 598 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 182.3 ms