RNA–Protein interactions for RNA: ENST00000413296.1

CBX1P3-201, Transcript of chromobox 1 pseudogene 3, humanhuman

BASIC

Gene CBX1P3, Length 527 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P3-201ENST00000413296 PTP4A3O75365 173 aa6.52□□□□□ -1.37
CBX1P3-201ENST00000413296 GUCA1CO95843 209 aa6.52□□□□□ -1.37
CBX1P3-201ENST00000413296 PLATP00750 562 aa6.52□□□□□ -1.37
CBX1P3-201ENST00000413296 ITGA4P13612 1032 aa6.52□□□□□ -1.37
CBX1P3-201ENST00000413296 GRK4P32298 578 aa6.52□□□□□ -1.37
CBX1P3-201ENST00000413296 GBP1P32455 592 aa6.52□□□□□ -1.37
CBX1P3-201ENST00000413296 MSH2P43246 934 aa6.52□□□□□ -1.37
CBX1P3-201ENST00000413296 CTCFP49711 727 aaPredicted RBP6.52□□□□□ -1.37
CBX1P3-201ENST00000413296 RCAN1P53805 252 aa6.52□□□□□ -1.37
CBX1P3-201ENST00000413296 KCNQ4P56696 695 aa6.52□□□□□ -1.37
CBX1P3-201ENST00000413296 PPARDQ03181 441 aa6.52□□□□□ -1.37
CBX1P3-201ENST00000413296 ADAM15Q13444 863 aa6.52□□□□□ -1.37
CBX1P3-201ENST00000413296 ZKSCAN8Q15776 578 aaPredicted RBP6.52□□□□□ -1.37
CBX1P3-201ENST00000413296 TSTQ16762 297 aaKnown RBP6.52□□□□□ -1.37
CBX1P3-201ENST00000413296 FAM47CQ5HY64 1035 aa6.52□□□□□ -1.37
CBX1P3-201ENST00000413296 KLHDC7AQ5VTJ3 777 aa6.52□□□□□ -1.37
CBX1P3-201ENST00000413296 ZNF765Q7L2R6 523 aa6.52□□□□□ -1.37
CBX1P3-201ENST00000413296 CYFIP1Q7L576 1253 aa6.52□□□□□ -1.37
CBX1P3-201ENST00000413296 OTUD6AQ7L8S5 288 aa6.52□□□□□ -1.37
CBX1P3-201ENST00000413296 GALNT7Q86SF2 657 aa6.52□□□□□ -1.37
CBX1P3-201ENST00000413296 C2CD5Q86YS7 1000 aa6.52□□□□□ -1.37
CBX1P3-201ENST00000413296 OR10H5Q8NGA6 315 aa6.52□□□□□ -1.37
CBX1P3-201ENST00000413296 TTLL11Q8NHH1 800 aa6.52□□□□□ -1.37
CBX1P3-201ENST00000413296 CEP70Q8NHQ1 597 aa6.52□□□□□ -1.37
CBX1P3-201ENST00000413296 PCDH19Q8TAB3 1148 aa6.52□□□□□ -1.37
CBX1P3-201ENST00000413296 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.52□□□□□ -1.37
CBX1P3-201ENST00000413296 KLHDC4Q8TBB5 520 aa6.52□□□□□ -1.37
CBX1P3-201ENST00000413296 C7orf25Q9BPX7 421 aa6.52□□□□□ -1.37
CBX1P3-201ENST00000413296 EDEM3Q9BZQ6 932 aa6.52□□□□□ -1.37
CBX1P3-201ENST00000413296 PAIP1Q9H074 479 aaKnown RBP6.52□□□□□ -1.37
CBX1P3-201ENST00000413296 OR10A4Q9H209 315 aa6.52□□□□□ -1.37
CBX1P3-201ENST00000413296 KCTD10Q9H3F6 313 aa6.52□□□□□ -1.37
CBX1P3-201ENST00000413296 TOR4AQ9NXH8 423 aa6.52□□□□□ -1.37
CBX1P3-201ENST00000413296 SLC39A10Q9ULF5 831 aa6.52□□□□□ -1.37
CBX1P3-201ENST00000413296 SPO11Q9Y5K1 396 aa6.52□□□□□ -1.37
CBX1P3-201ENST00000413296 SNX8Q9Y5X2 465 aa6.52□□□□□ -1.37
CBX1P3-201ENST00000413296 ATP23Q9Y6H3 246 aa6.52□□□□□ -1.37
CBX1P3-201ENST00000413296 GRIN2BQ13224 1484 aa6.52□□□□□ -1.37
CBX1P3-201ENST00000413296 MAGI1Q96QZ7 1491 aaPredicted RBP6.52□□□□□ -1.37
CBX1P3-201ENST00000413296 EIF4G3O43432 1585 aaKnown RBP6.52□□□□□ -1.37
CBX1P3-201ENST00000413296 FLT1P17948 1338 aa6.51□□□□□ -1.37
CBX1P3-201ENST00000413296 hCG_1807616A0A1W2PRN6 198 aa6.51□□□□□ -1.37
CBX1P3-201ENST00000413296 PRAMEF27A3QJZ7 478 aa6.51□□□□□ -1.37
CBX1P3-201ENST00000413296 KIF5CO60282 957 aa6.51□□□□□ -1.37
CBX1P3-201ENST00000413296 TSPAN3O60637 253 aa6.51□□□□□ -1.37
CBX1P3-201ENST00000413296 CYP17A1P05093 508 aa6.51□□□□□ -1.37
CBX1P3-201ENST00000413296 KRT13P13646 458 aa6.51□□□□□ -1.37
CBX1P3-201ENST00000413296 DNM2P50570 870 aa6.51□□□□□ -1.37
CBX1P3-201ENST00000413296 AFF3P51826 1226 aaKnown RBP6.51□□□□□ -1.37
CBX1P3-201ENST00000413296 SLC16A1P53985 500 aa6.51□□□□□ -1.37
CBX1P3-201ENST00000413296 SMAD3P84022 425 aaKnown RBP6.51□□□□□ -1.37
CBX1P3-201ENST00000413296 PAK1Q13153 545 aa6.51□□□□□ -1.37
CBX1P3-201ENST00000413296 EFR3AQ14156 821 aa6.51□□□□□ -1.37
CBX1P3-201ENST00000413296 SEMA3AQ14563 771 aa6.51□□□□□ -1.37
CBX1P3-201ENST00000413296 WTAPQ15007 396 aa6.51□□□□□ -1.37
CBX1P3-201ENST00000413296 INF2Q27J81 1249 aa6.51□□□□□ -1.37
CBX1P3-201ENST00000413296 HSP90B2PQ58FF3 399 aa6.51□□□□□ -1.37
CBX1P3-201ENST00000413296 DENND5AQ6IQ26 1287 aa6.51□□□□□ -1.37
CBX1P3-201ENST00000413296 ACAD10Q6JQN1 1059 aa6.51□□□□□ -1.37
CBX1P3-201ENST00000413296 CRTC1Q6UUV9 634 aa6.51□□□□□ -1.37
CBX1P3-201ENST00000413296 IL27RAQ6UWB1 636 aa6.51□□□□□ -1.37
CBX1P3-201ENST00000413296 RSPO2Q6UXX9 243 aaPredicted RBP6.51□□□□□ -1.37
CBX1P3-201ENST00000413296 FRMD7Q6ZUT3 714 aa6.51□□□□□ -1.37
CBX1P3-201ENST00000413296 UNC45BQ8IWX7 931 aa6.51□□□□□ -1.37
CBX1P3-201ENST00000413296 CCDC170Q8IYT3 715 aa6.51□□□□□ -1.37
CBX1P3-201ENST00000413296 ZNF687Q8N1G0 1237 aa6.51□□□□□ -1.37
CBX1P3-201ENST00000413296 TXLNBQ8N3L3 684 aa6.51□□□□□ -1.37
CBX1P3-201ENST00000413296 PPM1NQ8N819 430 aa6.51□□□□□ -1.37
CBX1P3-201ENST00000413296 UTP15Q8TED0 518 aaKnown RBP6.51□□□□□ -1.37
CBX1P3-201ENST00000413296 RIN2Q8WYP3 895 aaPredicted RBP6.51□□□□□ -1.37
CBX1P3-201ENST00000413296 ST8SIA4Q92187 359 aa6.51□□□□□ -1.37
CBX1P3-201ENST00000413296 RILPL2Q969X0 211 aa6.51□□□□□ -1.37
CBX1P3-201ENST00000413296 RBM18Q96H35 190 aaKnown RBP6.51□□□□□ -1.37
CBX1P3-201ENST00000413296 CCDC74BQ96LY2 380 aa6.51□□□□□ -1.37
CBX1P3-201ENST00000413296 PIGSQ96S52 555 aa6.51□□□□□ -1.37
CBX1P3-201ENST00000413296 POP1Q99575 1024 aaKnown RBP6.51□□□□□ -1.37
CBX1P3-201ENST00000413296 MTRQ99707 1265 aa6.51□□□□□ -1.37
CBX1P3-201ENST00000413296 SLX1AQ9BQ83 275 aa6.51□□□□□ -1.37
CBX1P3-201ENST00000413296 ALG1Q9BT22 464 aa6.51□□□□□ -1.37
CBX1P3-201ENST00000413296 ZC3H12CQ9C0D7 883 aaKnown RBP6.51□□□□□ -1.37
CBX1P3-201ENST00000413296 MKRN2Q9H000 416 aaKnown RBP6.51□□□□□ -1.37
CBX1P3-201ENST00000413296 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.51□□□□□ -1.37
CBX1P3-201ENST00000413296 ACAD9Q9H845 621 aa6.51□□□□□ -1.37
CBX1P3-201ENST00000413296 ZNF287Q9HBT7 754 aa6.51□□□□□ -1.37
CBX1P3-201ENST00000413296 KCND1Q9NSA2 647 aa6.51□□□□□ -1.37
CBX1P3-201ENST00000413296 KCTD5Q9NXV2 234 aa6.51□□□□□ -1.37
CBX1P3-201ENST00000413296 CPSF2Q9P2I0 782 aaKnown RBP6.51□□□□□ -1.37
CBX1P3-201ENST00000413296 SH3BGRL2Q9UJC5 107 aa6.51□□□□□ -1.37
CBX1P3-201ENST00000413296 OGDHLQ9ULD0 1010 aa6.51□□□□□ -1.37
CBX1P3-201ENST00000413296 SYNJ2O15056 1496 aa6.51□□□□□ -1.37
CBX1P3-201ENST00000413296 GAPVD1Q14C86 1478 aa6.51□□□□□ -1.37
CBX1P3-201ENST00000413296 SNAPC4Q5SXM2 1469 aa6.5□□□□□ -1.37
CBX1P3-201ENST00000413296 A0A1W2PPC4 97 aa6.5□□□□□ -1.37
CBX1P3-201ENST00000413296 NDC80O14777 642 aa6.5□□□□□ -1.37
CBX1P3-201ENST00000413296 FSCN2O14926 492 aa6.5□□□□□ -1.37
CBX1P3-201ENST00000413296 ARHGAP6O43182 974 aa6.5□□□□□ -1.37
CBX1P3-201ENST00000413296 SIAH2O43255 324 aa6.5□□□□□ -1.37
CBX1P3-201ENST00000413296 KRT37O76014 449 aa6.5□□□□□ -1.37
CBX1P3-201ENST00000413296 TMEM63AO94886 807 aa6.5□□□□□ -1.37
CBX1P3-201ENST00000413296 EEF2P13639 858 aaKnown RBP6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms