RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 SH2D3AQ9BRG2 576 aa16.21■□□□□ 0.19
NIF3L1-205ENST00000409588 CWH43Q9H720 699 aa16.21■□□□□ 0.19
NIF3L1-205ENST00000409588 TUFT1Q9NNX1 390 aa16.21■□□□□ 0.19
NIF3L1-205ENST00000409588 WRAP73Q9P2S5 460 aaPredicted RBP16.21■□□□□ 0.19
NIF3L1-205ENST00000409588 STK39Q9UEW8 545 aa16.21■□□□□ 0.19
NIF3L1-205ENST00000409588 PRKAG3Q9UGI9 489 aa16.21■□□□□ 0.19
NIF3L1-205ENST00000409588 NCOR1O75376 2440 aa16.21■□□□□ 0.19
NIF3L1-205ENST00000409588 BDP1A6H8Y1 2624 aa16.2■□□□□ 0.18
NIF3L1-205ENST00000409588 MUC3AQ02505 3323 aa16.2■□□□□ 0.18
NIF3L1-205ENST00000409588 FGF18O76093 207 aa16.2■□□□□ 0.18
NIF3L1-205ENST00000409588 FGFR1P11362 822 aa16.2■□□□□ 0.18
NIF3L1-205ENST00000409588 AXLP30530 894 aa16.2■□□□□ 0.18
NIF3L1-205ENST00000409588 CYP4A11Q02928 519 aa16.2■□□□□ 0.18
NIF3L1-205ENST00000409588 LAMTOR4Q0VGL1 99 aa16.2■□□□□ 0.18
NIF3L1-205ENST00000409588 ST3GAL1Q11201 340 aa16.2■□□□□ 0.18
NIF3L1-205ENST00000409588 ADAM15Q13444 863 aa16.2■□□□□ 0.18
NIF3L1-205ENST00000409588 EMC2Q15006 297 aa16.2■□□□□ 0.18
NIF3L1-205ENST00000409588 TWF2Q6IBS0 349 aaKnown RBP16.2■□□□□ 0.18
NIF3L1-205ENST00000409588 PTCRAQ6ISU1 281 aaPredicted RBP16.2■□□□□ 0.18
NIF3L1-205ENST00000409588 FERMT3Q86UX7 667 aa16.2■□□□□ 0.18
NIF3L1-205ENST00000409588 NOSTRINQ8IVI9 506 aa16.2■□□□□ 0.18
NIF3L1-205ENST00000409588 THNSL1Q8IYQ7 743 aa16.2■□□□□ 0.18
NIF3L1-205ENST00000409588 COLGALT1Q8NBJ5 622 aa16.2■□□□□ 0.18
NIF3L1-205ENST00000409588 MICAL1Q8TDZ2 1067 aa16.2■□□□□ 0.18
NIF3L1-205ENST00000409588 NLRP4Q96MN2 994 aa16.2■□□□□ 0.18
NIF3L1-205ENST00000409588 CCDC43Q96MW1 224 aaKnown RBP16.2■□□□□ 0.18
NIF3L1-205ENST00000409588 NACC1Q96RE7 527 aa16.2■□□□□ 0.18
NIF3L1-205ENST00000409588 POLR3CQ9BUI4 534 aaPredicted RBP16.2■□□□□ 0.18
NIF3L1-205ENST00000409588 NFKBIZQ9BYH8 718 aa16.2■□□□□ 0.18
NIF3L1-205ENST00000409588 NGRNQ9NPE2 291 aaKnown RBP16.2■□□□□ 0.18
NIF3L1-205ENST00000409588 UBN1Q9NPG3 1134 aa16.2■□□□□ 0.18
NIF3L1-205ENST00000409588 TLR9Q9NR96 1032 aa16.2■□□□□ 0.18
NIF3L1-205ENST00000409588 CLDND1Q9NY35 253 aa16.2■□□□□ 0.18
NIF3L1-205ENST00000409588 NOL7Q9UMY1 257 aaKnown RBP16.2■□□□□ 0.18
NIF3L1-205ENST00000409588 RBAK-RBAKDNI3L0D1 243 aa16.19■□□□□ 0.18
NIF3L1-205ENST00000409588 SRGAP2CP0DJJ0 459 aa16.19■□□□□ 0.18
NIF3L1-205ENST00000409588 U2AF2P26368 475 aaKnown RBP eCLIP16.19■□□□□ 0.181e-6■□□□□ 9.2
NIF3L1-205ENST00000409588 MCM7P33993 719 aa16.19■□□□□ 0.18
NIF3L1-205ENST00000409588 ALDH7A1P49419 539 aaKnown RBP16.19■□□□□ 0.18
NIF3L1-205ENST00000409588 GATMP50440 423 aa16.19■□□□□ 0.18
NIF3L1-205ENST00000409588 HYAL1Q12794 435 aa16.19■□□□□ 0.18
NIF3L1-205ENST00000409588 PDIA5Q14554 519 aa16.19■□□□□ 0.18
NIF3L1-205ENST00000409588 KCNT2Q6UVM3 1135 aa16.19■□□□□ 0.18
NIF3L1-205ENST00000409588 IFNLR1Q8IU57 520 aaPredicted RBP16.19■□□□□ 0.18
NIF3L1-205ENST00000409588 EFHBQ8N7U6 833 aa16.19■□□□□ 0.18
NIF3L1-205ENST00000409588 MRPS27Q92552 414 aaKnown RBP16.19■□□□□ 0.18
NIF3L1-205ENST00000409588 TMEM143Q96AN5 459 aa16.19■□□□□ 0.18
NIF3L1-205ENST00000409588 ZNF668Q96K58 619 aaPredicted RBP16.19■□□□□ 0.18
NIF3L1-205ENST00000409588 ZNF558Q96NG5 402 aa16.19■□□□□ 0.18
NIF3L1-205ENST00000409588 C1QTNF1Q9BXJ1 281 aa16.19■□□□□ 0.18
NIF3L1-205ENST00000409588 AGPAT5Q9NUQ2 364 aa16.19■□□□□ 0.18
NIF3L1-205ENST00000409588 FAM105AQ9NUU6 356 aa16.19■□□□□ 0.18
NIF3L1-205ENST00000409588 SPG21Q9NZD8 308 aa16.19■□□□□ 0.18
NIF3L1-205ENST00000409588 KANSL3Q9P2N6 904 aa16.19■□□□□ 0.18
NIF3L1-205ENST00000409588 DBR1Q9UK59 544 aaKnown RBP16.19■□□□□ 0.18
NIF3L1-205ENST00000409588 PIN4Q9Y237 131 aaKnown RBP16.19■□□□□ 0.18
NIF3L1-205ENST00000409588 LAD1O00515 517 aa16.18■□□□□ 0.18
NIF3L1-205ENST00000409588 DTNBO60941 627 aa16.18■□□□□ 0.18
NIF3L1-205ENST00000409588 IBSPP21815 317 aaPredicted RBP16.18■□□□□ 0.18
NIF3L1-205ENST00000409588 RPA1P27694 616 aa16.18■□□□□ 0.18
NIF3L1-205ENST00000409588 PTENP60484 403 aa16.18■□□□□ 0.18
NIF3L1-205ENST00000409588 GLB1LQ6UWU2 654 aa16.18■□□□□ 0.18
NIF3L1-205ENST00000409588 MRPL10Q7Z7H8 261 aaKnown RBP16.18■□□□□ 0.18
NIF3L1-205ENST00000409588 KSR1Q8IVT5 923 aa16.18■□□□□ 0.18
NIF3L1-205ENST00000409588 FAM178BQ8IXR5 827 aa16.18■□□□□ 0.18
NIF3L1-205ENST00000409588 RNF149Q8NC42 400 aa16.18■□□□□ 0.18
NIF3L1-205ENST00000409588 CCDC51Q96ER9 411 aa16.18■□□□□ 0.18
NIF3L1-205ENST00000409588 RAB34Q9BZG1 259 aa16.18■□□□□ 0.18
NIF3L1-205ENST00000409588 OCEL1Q9H607 264 aa16.18■□□□□ 0.18
NIF3L1-205ENST00000409588 TLE6Q9H808 572 aa16.18■□□□□ 0.18
NIF3L1-205ENST00000409588 RNF19AQ9NV58 838 aa16.18■□□□□ 0.18
NIF3L1-205ENST00000409588 FNDC1Q4ZHG4 1894 aaPredicted RBP16.17■□□□□ 0.18
NIF3L1-205ENST00000409588 CSDE1O75534 798 aaKnown RBP16.17■□□□□ 0.18
NIF3L1-205ENST00000409588 OR52Z1P0C646 297 aa16.17■□□□□ 0.18
NIF3L1-205ENST00000409588 SRGAP2BP0DMP2 458 aa16.17■□□□□ 0.18
NIF3L1-205ENST00000409588 ATP2B1P20020 1258 aa16.17■□□□□ 0.18
NIF3L1-205ENST00000409588 FGFR4P22455 802 aa16.17■□□□□ 0.18
NIF3L1-205ENST00000409588 DNAJB1P25685 340 aa16.17■□□□□ 0.18
NIF3L1-205ENST00000409588 ARL2P36404 184 aa16.17■□□□□ 0.18
NIF3L1-205ENST00000409588 LTBRP36941 435 aa16.17■□□□□ 0.18
NIF3L1-205ENST00000409588 RARRES1P49788 294 aa16.17■□□□□ 0.18
NIF3L1-205ENST00000409588 GUCY1B3Q02153 619 aa16.17■□□□□ 0.18
NIF3L1-205ENST00000409588 CLLU1OSQ5K130 101 aa16.17■□□□□ 0.18
NIF3L1-205ENST00000409588 LRRC55Q6ZSA7 311 aa16.17■□□□□ 0.18
NIF3L1-205ENST00000409588 EP400NLQ6ZTU2 488 aa16.17■□□□□ 0.18
NIF3L1-205ENST00000409588 RNF169Q8NCN4 708 aa16.17■□□□□ 0.18
NIF3L1-205ENST00000409588 MCPH1Q8NEM0 835 aa16.17■□□□□ 0.18
NIF3L1-205ENST00000409588 CNTNAP2Q9UHC6 1331 aa16.17■□□□□ 0.18
NIF3L1-205ENST00000409588 ZBTB39O15060 712 aa16.16■□□□□ 0.18
NIF3L1-205ENST00000409588 ERLIN2O94905 339 aa16.16■□□□□ 0.18
NIF3L1-205ENST00000409588 SPATA31C1P0DKV0 1188 aa16.16■□□□□ 0.18
NIF3L1-205ENST00000409588 TECP42680 631 aa16.16■□□□□ 0.18
NIF3L1-205ENST00000409588 GIT2Q14161 759 aa16.16■□□□□ 0.18
NIF3L1-205ENST00000409588 TTC38Q5R3I4 469 aa16.16■□□□□ 0.18
NIF3L1-205ENST00000409588 HAUS3Q68CZ6 603 aa16.16■□□□□ 0.18
NIF3L1-205ENST00000409588 CATSPER3Q86XQ3 398 aa16.16■□□□□ 0.18
NIF3L1-205ENST00000409588 TMEM60Q9H2L4 133 aa16.16■□□□□ 0.18
NIF3L1-205ENST00000409588 IGFLR1Q9H665 355 aa16.16■□□□□ 0.18
NIF3L1-205ENST00000409588 PCDHB2Q9Y5E7 798 aa16.16■□□□□ 0.18
NIF3L1-205ENST00000409588 H3BQ06 376 aaPredicted RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms