RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 SEPT11Q9NVA2 429 aaKnown RBP18.26■□□□□ 0.51
NUP50-203ENST00000407019 PPP1R9AQ9ULJ8 1098 aa18.26■□□□□ 0.51
NUP50-203ENST00000407019 ASTN2O75129 1339 aaPredicted RBP18.26■□□□□ 0.51
NUP50-203ENST00000407019 BUB1BO60566 1050 aaPredicted RBP18.26■□□□□ 0.51
NUP50-203ENST00000407019 LRRN2O75325 713 aa18.26■□□□□ 0.51
NUP50-203ENST00000407019 ABCB4P21439 1286 aa18.26■□□□□ 0.51
NUP50-203ENST00000407019 GTF2BQ00403 316 aa18.26■□□□□ 0.51
NUP50-203ENST00000407019 DGKZQ13574 1117 aa18.26■□□□□ 0.51
NUP50-203ENST00000407019 CFAP58Q5T655 872 aa18.26■□□□□ 0.51
NUP50-203ENST00000407019 LRRC31Q6UY01 552 aa18.26■□□□□ 0.51
NUP50-203ENST00000407019 HAUS6Q7Z4H7 955 aa18.26■□□□□ 0.51
NUP50-203ENST00000407019 C4orf19Q8IY42 314 aa18.26■□□□□ 0.51
NUP50-203ENST00000407019 XXYLT1Q8NBI6 393 aa18.26■□□□□ 0.51
NUP50-203ENST00000407019 TEPSINQ96N21 525 aa18.26■□□□□ 0.51
NUP50-203ENST00000407019 AP1M1Q9BXS5 423 aa18.26■□□□□ 0.51
NUP50-203ENST00000407019 TAF1DQ9H5J8 278 aaPredicted RBP18.26■□□□□ 0.51
NUP50-203ENST00000407019 HSPBP1Q9NZL4 362 aa18.26■□□□□ 0.51
NUP50-203ENST00000407019 PNMA2Q9UL42 364 aa18.26■□□□□ 0.51
NUP50-203ENST00000407019 IGSF9BQ9UPX0 1349 aa18.25■□□□□ 0.51
NUP50-203ENST00000407019 FOXN3O00409 490 aaPredicted RBP18.25■□□□□ 0.51
NUP50-203ENST00000407019 BACH1O14867 736 aa18.25■□□□□ 0.51
NUP50-203ENST00000407019 GUCY2FP51841 1108 aa18.25■□□□□ 0.51
NUP50-203ENST00000407019 JAK3P52333 1124 aa18.25■□□□□ 0.51
NUP50-203ENST00000407019 SNRPFP62306 86 aaKnown RBP18.25■□□□□ 0.51
NUP50-203ENST00000407019 PPP3CAQ08209 521 aa18.25■□□□□ 0.51
NUP50-203ENST00000407019 UGCGQ16739 394 aa18.25■□□□□ 0.51
NUP50-203ENST00000407019 EPC2Q52LR7 807 aa18.25■□□□□ 0.51
NUP50-203ENST00000407019 IWS1Q96ST2 819 aa18.25■□□□□ 0.51
NUP50-203ENST00000407019 AGPAT1Q99943 283 aa18.25■□□□□ 0.51
NUP50-203ENST00000407019 ISCUQ9H1K1 167 aa18.25■□□□□ 0.51
NUP50-203ENST00000407019 UBE2TQ9NPD8 197 aaPredicted RBP18.25■□□□□ 0.51
NUP50-203ENST00000407019 TCEAL9Q9UHQ7 104 aa18.25■□□□□ 0.51
NUP50-203ENST00000407019 KRIT1O00522 736 aa18.24■□□□□ 0.51
NUP50-203ENST00000407019 MAPK13O15264 365 aa18.24■□□□□ 0.51
NUP50-203ENST00000407019 SHOX2O60902 331 aaPredicted RBP18.24■□□□□ 0.51
NUP50-203ENST00000407019 MYCLP12524 364 aaPredicted RBP18.24■□□□□ 0.51
NUP50-203ENST00000407019 PSMC5P62195 406 aa18.24■□□□□ 0.51
NUP50-203ENST00000407019 ERVK-9P63128 1117 aa18.24■□□□□ 0.51
NUP50-203ENST00000407019 PPATQ06203 517 aa18.24■□□□□ 0.51
NUP50-203ENST00000407019 CUL1Q13616 776 aa18.24■□□□□ 0.51
NUP50-203ENST00000407019 TMEM150BA6NC51 233 aa18.24■□□□□ 0.51
NUP50-203ENST00000407019 ANKRD62A6NC57 917 aa18.24■□□□□ 0.51
NUP50-203ENST00000407019 WDR64B1ANS9 1081 aa18.24■□□□□ 0.51
NUP50-203ENST00000407019 SART1O43290 800 aaKnown RBP18.24■□□□□ 0.51
NUP50-203ENST00000407019 CTNND1O60716 968 aaKnown RBP18.24■□□□□ 0.51
NUP50-203ENST00000407019 ZBED4O75132 1171 aa18.24■□□□□ 0.51
NUP50-203ENST00000407019 VCAM1P19320 739 aa18.24■□□□□ 0.51
NUP50-203ENST00000407019 SFNP31947 248 aa18.24■□□□□ 0.51
NUP50-203ENST00000407019 GCLMP48507 274 aa18.24■□□□□ 0.51
NUP50-203ENST00000407019 NCKAP1LP55160 1127 aa18.24■□□□□ 0.51
NUP50-203ENST00000407019 PEX3P56589 373 aa18.24■□□□□ 0.51
NUP50-203ENST00000407019 RNF207Q6ZRF8 634 aa18.24■□□□□ 0.51
NUP50-203ENST00000407019 ARHGEF19Q8IW93 802 aa18.24■□□□□ 0.51
NUP50-203ENST00000407019 IQCKQ8N0W5 287 aa18.24■□□□□ 0.51
NUP50-203ENST00000407019 SLC17A8Q8NDX2 589 aa18.24■□□□□ 0.51
NUP50-203ENST00000407019 ARHGEF26Q96DR7 871 aa18.24■□□□□ 0.51
NUP50-203ENST00000407019 RMDN3Q96TC7 470 aa18.24■□□□□ 0.51
NUP50-203ENST00000407019 SH2D3AQ9BRG2 576 aa18.24■□□□□ 0.51
NUP50-203ENST00000407019 PDCD2LQ9BRP1 358 aa18.24■□□□□ 0.51
NUP50-203ENST00000407019 PXMP2Q9NR77 195 aa18.24■□□□□ 0.51
NUP50-203ENST00000407019 TAS2R14Q9NYV8 317 aa18.24■□□□□ 0.51
NUP50-203ENST00000407019 SLC16A4O15374 487 aa18.23■□□□□ 0.51
NUP50-203ENST00000407019 KRT76Q01546 638 aa18.23■□□□□ 0.51
NUP50-203ENST00000407019 MTMR2Q13614 643 aa18.23■□□□□ 0.51
NUP50-203ENST00000407019 HLTFQ14527 1009 aaKnown RBP eCLIP18.23■□□□□ 0.51
NUP50-203ENST00000407019 TRADDQ15628 312 aa18.23■□□□□ 0.51
NUP50-203ENST00000407019 TTMPQ5BVD1 217 aa18.23■□□□□ 0.51
NUP50-203ENST00000407019 C1orf220Q5T0J3 134 aa18.23■□□□□ 0.51
NUP50-203ENST00000407019 ARL8AQ96BM9 186 aa18.23■□□□□ 0.51
NUP50-203ENST00000407019 TRERF1Q96PN7 1200 aa18.23■□□□□ 0.51
NUP50-203ENST00000407019 DDX47Q9H0S4 455 aaKnown RBP18.23■□□□□ 0.51
NUP50-203ENST00000407019 THAP2Q9H0W7 228 aa18.23■□□□□ 0.51
NUP50-203ENST00000407019 SLITRK6Q9H5Y7 841 aa18.23■□□□□ 0.51
NUP50-203ENST00000407019 RPAP3Q9H6T3 665 aaPredicted RBP18.23■□□□□ 0.51
NUP50-203ENST00000407019 GPRC5CQ9NQ84 441 aa18.23■□□□□ 0.51
NUP50-203ENST00000407019 TTC7AQ9ULT0 858 aaPredicted RBP18.23■□□□□ 0.51
NUP50-203ENST00000407019 DIS3Q9Y2L1 958 aaKnown RBP18.23■□□□□ 0.51
NUP50-203ENST00000407019 FER1L6Q2WGJ9 1857 aa18.23■□□□□ 0.51
NUP50-203ENST00000407019 ATP9AO75110 1047 aa18.22■□□□□ 0.51
NUP50-203ENST00000407019 XKR9Q5GH70 373 aa18.22■□□□□ 0.51
NUP50-203ENST00000407019 ARHGEF16Q5VV41 709 aa18.22■□□□□ 0.51
NUP50-203ENST00000407019 PALB2Q86YC2 1186 aa18.22■□□□□ 0.51
NUP50-203ENST00000407019 JDP2Q8WYK2 163 aa18.22■□□□□ 0.51
NUP50-203ENST00000407019 ANKEF1Q9NU02 776 aa18.22■□□□□ 0.51
NUP50-203ENST00000407019 BHMG1C9JSJ3 638 aaPredicted RBP18.22■□□□□ 0.51
NUP50-203ENST00000407019 DDX3YO15523 660 aaKnown RBP18.22■□□□□ 0.51
NUP50-203ENST00000407019 CCNE2O96020 404 aa18.22■□□□□ 0.51
NUP50-203ENST00000407019 HSPA9P38646 679 aaKnown RBP18.22■□□□□ 0.51
NUP50-203ENST00000407019 MXI1P50539 228 aa18.22■□□□□ 0.51
NUP50-203ENST00000407019 ZNF280AP59817 542 aaPredicted RBP18.22■□□□□ 0.51
NUP50-203ENST00000407019 SF3B2Q13435 895 aaKnown RBP18.22■□□□□ 0.51
NUP50-203ENST00000407019 FAM102BQ5T8I3 360 aa18.22■□□□□ 0.51
NUP50-203ENST00000407019 PLA2G4FQ68DD2 849 aa18.22■□□□□ 0.51
NUP50-203ENST00000407019 NSMFQ6X4W1 530 aa18.22■□□□□ 0.51
NUP50-203ENST00000407019 PLEKHO2Q8TD55 490 aa18.22■□□□□ 0.51
NUP50-203ENST00000407019 SLC20A1Q8WUM9 679 aa18.22■□□□□ 0.51
NUP50-203ENST00000407019 EXOC7Q9UPT5 735 aa18.22■□□□□ 0.51
NUP50-203ENST00000407019 BCS1LQ9Y276 419 aa18.22■□□□□ 0.51
NUP50-203ENST00000407019 TESPA1A2RU30 521 aaPredicted RBP18.21■□□□□ 0.51
NUP50-203ENST00000407019 FDX1P10109 184 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms