RNA–Protein interactions for RNA: ENST00000396914.3

CHCHD4-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD4, Length 1,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4-202ENST00000396914 TSPYL2Q9H2G4 693 aaPredicted RBP32.47■■■□□ 2.79
CHCHD4-202ENST00000396914 KCNH3Q9ULD8 1083 aa32.47■■■□□ 2.79
CHCHD4-202ENST00000396914 A0A1B0GVL5 298 aa32.46■■■□□ 2.79
CHCHD4-202ENST00000396914 TBCAO75347 108 aaKnown RBP32.46■■■□□ 2.79
CHCHD4-202ENST00000396914 FAM13AO94988 1023 aa32.46■■■□□ 2.79
CHCHD4-202ENST00000396914 MAPK7Q13164 816 aa32.46■■■□□ 2.79
CHCHD4-202ENST00000396914 NFKBIZQ9BYH8 718 aa32.46■■■□□ 2.79
CHCHD4-202ENST00000396914 SOX1O00570 391 aaPredicted RBP32.45■■■□□ 2.79
CHCHD4-202ENST00000396914 SMAD3P84022 425 aaKnown RBP32.45■■■□□ 2.79
CHCHD4-202ENST00000396914 MBTD1Q05BQ5 628 aa32.45■■■□□ 2.79
CHCHD4-202ENST00000396914 TMEM132AQ24JP5 1023 aa32.45■■■□□ 2.79
CHCHD4-202ENST00000396914 IFNLR1Q8IU57 520 aaPredicted RBP32.45■■■□□ 2.79
CHCHD4-202ENST00000396914 PYM1Q9BRP8 204 aaKnown RBP32.45■■■□□ 2.79
CHCHD4-202ENST00000396914 C17orf75Q9HAS0 396 aa32.45■■■□□ 2.79
CHCHD4-202ENST00000396914 KMT5AQ9NQR1 393 aa32.45■■■□□ 2.79
CHCHD4-202ENST00000396914 RGS18Q9NS28 235 aa32.45■■■□□ 2.79
CHCHD4-202ENST00000396914 C1orf112Q9NSG2 853 aa32.45■■■□□ 2.79
CHCHD4-202ENST00000396914 MSRAQ9UJ68 235 aa32.45■■■□□ 2.79
CHCHD4-202ENST00000396914 LRFN2Q9ULH4 789 aa32.45■■■□□ 2.79
CHCHD4-202ENST00000396914 ODF2LQ9ULJ1 636 aa32.45■■■□□ 2.79
CHCHD4-202ENST00000396914 TLL1O43897 1013 aa32.44■■■□□ 2.78
CHCHD4-202ENST00000396914 PFKFB1P16118 471 aa32.44■■■□□ 2.78
CHCHD4-202ENST00000396914 NPTX2P47972 431 aa32.44■■■□□ 2.78
CHCHD4-202ENST00000396914 GIT2Q14161 759 aa32.44■■■□□ 2.78
CHCHD4-202ENST00000396914 TWF2Q6IBS0 349 aaKnown RBP32.44■■■□□ 2.78
CHCHD4-202ENST00000396914 FAM43BQ6ZT52 329 aaPredicted RBP32.44■■■□□ 2.78
CHCHD4-202ENST00000396914 STAMQ92783 540 aa32.44■■■□□ 2.78
CHCHD4-202ENST00000396914 CUEDC2Q9H467 287 aa32.44■■■□□ 2.78
CHCHD4-202ENST00000396914 DACT1Q9NYF0 836 aa32.44■■■□□ 2.78
CHCHD4-202ENST00000396914 PLS3P13797 630 aa32.43■■■□□ 2.78
CHCHD4-202ENST00000396914 CDCA2Q69YH5 1023 aaPredicted RBP32.43■■■□□ 2.78
CHCHD4-202ENST00000396914 SLC24A5Q71RS6 500 aa32.43■■■□□ 2.78
CHCHD4-202ENST00000396914 MYCT1Q8N699 235 aa32.43■■■□□ 2.78
CHCHD4-202ENST00000396914 FSIP1Q8NA03 581 aa32.43■■■□□ 2.78
CHCHD4-202ENST00000396914 TOP1MTQ969P6 601 aa32.43■■■□□ 2.78
CHCHD4-202ENST00000396914 LRCH3Q96II8 777 aa32.43■■■□□ 2.78
CHCHD4-202ENST00000396914 CHST12Q9NRB3 414 aa32.43■■■□□ 2.78
CHCHD4-202ENST00000396914 AGPAT5Q9NUQ2 364 aa32.43■■■□□ 2.78
CHCHD4-202ENST00000396914 LARSQ9P2J5 1176 aaKnown RBP32.43■■■□□ 2.78
CHCHD4-202ENST00000396914 PBX2P40425 430 aa32.43■■■□□ 2.78
CHCHD4-202ENST00000396914 SMTNP53814 917 aa32.43■■■□□ 2.78
CHCHD4-202ENST00000396914 DSC3Q14574 896 aa32.43■■■□□ 2.78
CHCHD4-202ENST00000396914 PCBP1Q15365 356 aaKnown RBP eCLIP32.43■■■□□ 2.78
CHCHD4-202ENST00000396914 E2F4Q16254 413 aa32.43■■■□□ 2.78
CHCHD4-202ENST00000396914 MAPK6Q16659 721 aa32.43■■■□□ 2.78
CHCHD4-202ENST00000396914 CSPP1Q1MSJ5 1256 aa32.43■■■□□ 2.78
CHCHD4-202ENST00000396914 CEP57L1Q8IYX8 460 aa32.43■■■□□ 2.78
CHCHD4-202ENST00000396914 MRPS27Q92552 414 aaKnown RBP32.43■■■□□ 2.78
CHCHD4-202ENST00000396914 DDX12PQ92771 950 aa32.43■■■□□ 2.78
CHCHD4-202ENST00000396914 PBX4Q9BYU1 374 aa32.43■■■□□ 2.78
CHCHD4-202ENST00000396914 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP32.42■■■□□ 2.78
CHCHD4-202ENST00000396914 MYMKA6NI61 221 aa32.42■■■□□ 2.78
CHCHD4-202ENST00000396914 SLC16A4O15374 487 aa32.42■■■□□ 2.78
CHCHD4-202ENST00000396914 GJB5O95377 273 aa32.42■■■□□ 2.78
CHCHD4-202ENST00000396914 STAG3L1P0CL83 205 aa32.42■■■□□ 2.78
CHCHD4-202ENST00000396914 SARSP49591 514 aaKnown RBP32.42■■■□□ 2.78
CHCHD4-202ENST00000396914 EFNA5P52803 228 aa32.42■■■□□ 2.78
CHCHD4-202ENST00000396914 RAB30Q15771 203 aa32.42■■■□□ 2.78
CHCHD4-202ENST00000396914 CPB2Q96IY4 423 aa32.42■■■□□ 2.78
CHCHD4-202ENST00000396914 LRRC27Q9C0I9 530 aa32.42■■■□□ 2.78
CHCHD4-202ENST00000396914 PARVGQ9HBI0 331 aa32.42■■■□□ 2.78
CHCHD4-202ENST00000396914 PRMT7Q9NVM4 692 aaPredicted RBP32.42■■■□□ 2.78
CHCHD4-202ENST00000396914 KCNG1Q9UIX4 513 aa32.42■■■□□ 2.78
CHCHD4-202ENST00000396914 PCDHB7Q9Y5E2 793 aa32.42■■■□□ 2.78
CHCHD4-202ENST00000396914 PTPRSQ13332 1948 aa32.41■■■□□ 2.78
CHCHD4-202ENST00000396914 LAMA2P24043 3122 aaKnown RBP32.41■■■□□ 2.78
CHCHD4-202ENST00000396914 A0A1W2PQ27 194 aa32.41■■■□□ 2.78
CHCHD4-202ENST00000396914 A0A1W2PQ64 194 aa32.41■■■□□ 2.78
CHCHD4-202ENST00000396914 A0A1W2PQD8 194 aa32.41■■■□□ 2.78
CHCHD4-202ENST00000396914 TSPAN1O60635 241 aa32.41■■■□□ 2.78
CHCHD4-202ENST00000396914 PRKCBP05771 671 aa32.41■■■□□ 2.78
CHCHD4-202ENST00000396914 MYOGP15173 224 aa32.41■■■□□ 2.78
CHCHD4-202ENST00000396914 AMPD3Q01432 767 aa32.41■■■□□ 2.78
CHCHD4-202ENST00000396914 RNF169Q8NCN4 708 aa32.41■■■□□ 2.78
CHCHD4-202ENST00000396914 RNF216Q9NWF9 866 aaPredicted RBP32.41■■■□□ 2.78
CHCHD4-202ENST00000396914 ADGRA3Q8IWK6 1321 aa32.41■■■□□ 2.78
CHCHD4-202ENST00000396914 MYH11P35749 1972 aa32.4■■■□□ 2.78
CHCHD4-202ENST00000396914 K7ERI5 159 aa32.4■■■□□ 2.78
CHCHD4-202ENST00000396914 IDEP14735 1019 aa32.4■■■□□ 2.78
CHCHD4-202ENST00000396914 DNAJB2P25686 324 aa32.4■■■□□ 2.78
CHCHD4-202ENST00000396914 NPAS4Q8IUM7 802 aa32.4■■■□□ 2.78
CHCHD4-202ENST00000396914 YME1L1Q96TA2 773 aa32.4■■■□□ 2.78
CHCHD4-202ENST00000396914 TNMDQ9H2S6 317 aa32.4■■■□□ 2.78
CHCHD4-202ENST00000396914 PCDHA11Q9Y5I1 949 aa32.4■■■□□ 2.78
CHCHD4-202ENST00000396914 C9IYK1 514 aa32.39■■■□□ 2.78
CHCHD4-202ENST00000396914 B4GALT5O43286 388 aa32.39■■■□□ 2.78
CHCHD4-202ENST00000396914 SYKP43405 635 aa32.39■■■□□ 2.78
CHCHD4-202ENST00000396914 NDUFA8P51970 172 aa32.39■■■□□ 2.78
CHCHD4-202ENST00000396914 PRPF4BQ13523 1007 aaKnown RBP32.39■■■□□ 2.78
CHCHD4-202ENST00000396914 RAD9AQ99638 391 aa32.39■■■□□ 2.78
CHCHD4-202ENST00000396914 SERTAD1Q9UHV2 236 aa32.39■■■□□ 2.78
CHCHD4-202ENST00000396914 AXLP30530 894 aa32.38■■■□□ 2.77
CHCHD4-202ENST00000396914 NOTUMQ6P988 496 aa32.38■■■□□ 2.77
CHCHD4-202ENST00000396914 SPIRE2Q8WWL2 714 aa32.38■■■□□ 2.77
CHCHD4-202ENST00000396914 NKX2-4Q9H2Z4 354 aa32.38■■■□□ 2.77
CHCHD4-202ENST00000396914 FZD8Q9H461 694 aa32.38■■■□□ 2.77
CHCHD4-202ENST00000396914 MAGEF1Q9HAY2 307 aa32.38■■■□□ 2.77
CHCHD4-202ENST00000396914 INSL6Q9Y581 213 aa32.38■■■□□ 2.77
CHCHD4-202ENST00000396914 GBF1Q92538 1859 aa32.37■■■□□ 2.77
CHCHD4-202ENST00000396914 ARF4P18085 180 aaPredicted RBP32.37■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 156 ms