RNA–Protein interactions for RNA: ENST00000380285.7

SNX1-202, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 8,119 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-202ENST00000380285 ABCE1P61221 599 aaKnown RBP10.18□□□□□ -0.78
SNX1-202ENST00000380285 COASYQ13057 564 aa10.18□□□□□ -0.78
SNX1-202ENST00000380285 OR6B2Q6IFH4 312 aa10.18□□□□□ -0.78
SNX1-202ENST00000380285 SETD3Q86TU7 594 aaPredicted RBP10.18□□□□□ -0.78
SNX1-202ENST00000380285 PPP1R2P1Q96PQ5 205 aa10.18□□□□□ -0.78
SNX1-202ENST00000380285 KCNK16Q96T55 309 aa10.18□□□□□ -0.78
SNX1-202ENST00000380285 NBPF3Q9H094 633 aa10.18□□□□□ -0.78
SNX1-202ENST00000380285 IL1RAPL1Q9NZN1 696 aa10.18□□□□□ -0.78
SNX1-202ENST00000380285 BCORL1Q5H9F3 1711 aa10.18□□□□□ -0.78
SNX1-202ENST00000380285 HPCAL4Q9UM19 191 aa10.18□□□□□ -0.78
SNX1-202ENST00000380285 SASH1O94885 1247 aa10.18□□□□□ -0.78
SNX1-202ENST00000380285 HNRNPCP07910 306 aaKnown RBP eCLIP10.18□□□□□ -0.78
SNX1-202ENST00000380285 PGM1P36871 562 aa10.18□□□□□ -0.78
SNX1-202ENST00000380285 MAP3K7CLP57077 242 aa10.18□□□□□ -0.78
SNX1-202ENST00000380285 CCNI2Q6ZMN8 369 aaPredicted RBP10.18□□□□□ -0.78
SNX1-202ENST00000380285 RASSF3Q86WH2 238 aa10.18□□□□□ -0.78
SNX1-202ENST00000380285 TRIM45Q9H8W5 580 aaPredicted RBP10.18□□□□□ -0.78
SNX1-202ENST00000380285 SETBP1Q9Y6X0 1596 aa10.18□□□□□ -0.78
SNX1-202ENST00000380285 SOX5P35711 763 aa10.18□□□□□ -0.78
SNX1-202ENST00000380285 KPNB1Q14974 876 aaKnown RBP10.18□□□□□ -0.78
SNX1-202ENST00000380285 SMYD3Q9H7B4 428 aa10.18□□□□□ -0.78
SNX1-202ENST00000380285 TBC1D22BQ9NU19 505 aa10.18□□□□□ -0.78
SNX1-202ENST00000380285 EHD2Q9NZN4 543 aa10.18□□□□□ -0.78
SNX1-202ENST00000380285 PDP2Q9P2J9 529 aa10.18□□□□□ -0.78
SNX1-202ENST00000380285 UVRAGQ9P2Y5 699 aa10.18□□□□□ -0.78
SNX1-202ENST00000380285 MTO1Q9Y2Z2 717 aaKnown RBP10.18□□□□□ -0.78
SNX1-202ENST00000380285 INO80B-WBP1J3KQ70 363 aa10.18□□□□□ -0.78
SNX1-202ENST00000380285 KLHL2O95198 593 aa10.18□□□□□ -0.78
SNX1-202ENST00000380285 KRT8P05787 483 aa10.18□□□□□ -0.78
SNX1-202ENST00000380285 CCZ1BP86790 482 aa10.18□□□□□ -0.78
SNX1-202ENST00000380285 CCZ1P86791 482 aaPredicted RBP10.18□□□□□ -0.78
SNX1-202ENST00000380285 FLOT2Q14254 428 aa10.18□□□□□ -0.78
SNX1-202ENST00000380285 CRYMQ14894 314 aa10.18□□□□□ -0.78
SNX1-202ENST00000380285 SLC18A3Q16572 532 aa10.18□□□□□ -0.78
SNX1-202ENST00000380285 ZNF667Q5HYK9 610 aa10.18□□□□□ -0.78
SNX1-202ENST00000380285 TAB3Q8N5C8 712 aaPredicted RBP10.18□□□□□ -0.78
SNX1-202ENST00000380285 USP6NLQ92738 828 aa10.18□□□□□ -0.78
SNX1-202ENST00000380285 MSTO1Q9BUK6 570 aa10.18□□□□□ -0.78
SNX1-202ENST00000380285 INO80BQ9C086 356 aaPredicted RBP10.18□□□□□ -0.78
SNX1-202ENST00000380285 ABCA8O94911 1581 aa10.18□□□□□ -0.78
SNX1-202ENST00000380285 PHF2O75151 1096 aa10.17□□□□□ -0.78
SNX1-202ENST00000380285 RTN2O75298 545 aa10.17□□□□□ -0.78
SNX1-202ENST00000380285 LSP1P33241 339 aa10.17□□□□□ -0.78
SNX1-202ENST00000380285 VSNL1P62760 191 aa10.17□□□□□ -0.78
SNX1-202ENST00000380285 CC2D2BQ6DHV5 1058 aa10.17□□□□□ -0.78
SNX1-202ENST00000380285 TRPM8Q7Z2W7 1104 aa10.17□□□□□ -0.78
SNX1-202ENST00000380285 PRUNE1Q86TP1 453 aa10.17□□□□□ -0.78
SNX1-202ENST00000380285 DCLK2Q8N568 766 aa10.17□□□□□ -0.78
SNX1-202ENST00000380285 SYN2Q92777 582 aaPredicted RBP10.17□□□□□ -0.78
SNX1-202ENST00000380285 RANBP17Q9H2T7 1088 aaKnown RBP10.17□□□□□ -0.78
SNX1-202ENST00000380285 CDH2P19022 906 aaPredicted RBP10.17□□□□□ -0.78
SNX1-202ENST00000380285 CYLC2Q14093 348 aaPredicted RBP10.17□□□□□ -0.78
SNX1-202ENST00000380285 HP1BP3Q5SSJ5 553 aaPredicted RBP10.17□□□□□ -0.78
SNX1-202ENST00000380285 C16orf89Q6UX73 402 aa10.17□□□□□ -0.78
SNX1-202ENST00000380285 FOXP4Q8IVH2 680 aaPredicted RBP10.17□□□□□ -0.78
SNX1-202ENST00000380285 MB21D2Q8IYB1 491 aaPredicted RBP10.17□□□□□ -0.78
SNX1-202ENST00000380285 PCIF1Q9H4Z3 704 aa10.17□□□□□ -0.78
SNX1-202ENST00000380285 LY9Q9HBG7 655 aa10.17□□□□□ -0.78
SNX1-202ENST00000380285 CHCHD3Q9NX63 227 aaKnown RBP10.17□□□□□ -0.78
SNX1-202ENST00000380285 SUFUQ9UMX1 484 aa10.17□□□□□ -0.78
SNX1-202ENST00000380285 ACADSP16219 412 aa10.17□□□□□ -0.78
SNX1-202ENST00000380285 SFNP31947 248 aa10.17□□□□□ -0.78
SNX1-202ENST00000380285 PRELPP51888 382 aa10.17□□□□□ -0.78
SNX1-202ENST00000380285 NLRP11P59045 1033 aaKnown RBP10.17□□□□□ -0.78
SNX1-202ENST00000380285 PDIA5Q14554 519 aa10.17□□□□□ -0.78
SNX1-202ENST00000380285 HIF1AQ16665 826 aa10.17□□□□□ -0.78
SNX1-202ENST00000380285 PUS3Q9BZE2 481 aaKnown RBP10.17□□□□□ -0.78
SNX1-202ENST00000380285 CCSER1Q9C0I3 900 aa10.17□□□□□ -0.78
SNX1-202ENST00000380285 PARVAQ9NVD7 372 aa10.17□□□□□ -0.78
SNX1-202ENST00000380285 UNC13BO14795 1591 aa10.17□□□□□ -0.78
SNX1-202ENST00000380285 A0A087WWV3 80 aa10.17□□□□□ -0.78
SNX1-202ENST00000380285 GOLGA8TH3BQL2 631 aa10.17□□□□□ -0.78
SNX1-202ENST00000380285 ZBTB5O15062 677 aa10.17□□□□□ -0.78
SNX1-202ENST00000380285 ATP1A1P05023 1023 aaKnown RBP10.17□□□□□ -0.78
SNX1-202ENST00000380285 SERPINB9P50453 376 aa10.17□□□□□ -0.78
SNX1-202ENST00000380285 ACTN3Q08043 901 aaPredicted RBP10.17□□□□□ -0.78
SNX1-202ENST00000380285 ADRM1Q16186 407 aa10.17□□□□□ -0.78
SNX1-202ENST00000380285 NLRP10Q86W26 655 aa10.17□□□□□ -0.78
SNX1-202ENST00000380285 HEXIM2Q96MH2 286 aaKnown RBP10.17□□□□□ -0.78
SNX1-202ENST00000380285 CCDC134Q9H6E4 229 aa10.17□□□□□ -0.78
SNX1-202ENST00000380285 ZBBXA8MT70 800 aa10.17□□□□□ -0.78
SNX1-202ENST00000380285 KRT14P02533 472 aa10.17□□□□□ -0.78
SNX1-202ENST00000380285 GPS1Q13098 491 aa10.17□□□□□ -0.78
SNX1-202ENST00000380285 KIAA1755Q5JYT7 1200 aa10.17□□□□□ -0.78
SNX1-202ENST00000380285 MTHFD1LQ6UB35 978 aa10.17□□□□□ -0.78
SNX1-202ENST00000380285 GOLGA8JA6NMD2 632 aa10.17□□□□□ -0.78
SNX1-202ENST00000380285 XPAP23025 273 aaPredicted RBP10.17□□□□□ -0.78
SNX1-202ENST00000380285 ROR1Q01973 937 aa10.17□□□□□ -0.78
SNX1-202ENST00000380285 TERB1Q8NA31 727 aa10.17□□□□□ -0.78
SNX1-202ENST00000380285 BHMT2Q9H2M3 363 aa10.17□□□□□ -0.78
SNX1-202ENST00000380285 BSDC1Q9NW68 430 aaPredicted RBP10.17□□□□□ -0.78
SNX1-202ENST00000380285 HNRNPCL2B2RXH8 293 aa10.17□□□□□ -0.78
SNX1-202ENST00000380285 TCP11X1B4DZS4 312 aa10.17□□□□□ -0.78
SNX1-202ENST00000380285 USP11P51784 963 aa10.17□□□□□ -0.78
SNX1-202ENST00000380285 E4F1Q66K89 784 aaPredicted RBP10.17□□□□□ -0.78
SNX1-202ENST00000380285 MMGT1Q8N4V1 131 aa10.17□□□□□ -0.78
SNX1-202ENST00000380285 RNPC3Q96LT9 517 aaKnown RBP10.17□□□□□ -0.78
SNX1-202ENST00000380285 AKT3Q9Y243 479 aa10.17□□□□□ -0.78
SNX1-202ENST00000380285 PPME1Q9Y570 386 aa10.17□□□□□ -0.78
SNX1-202ENST00000380285 SNX2O60749 519 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms