RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 SPATA31D4Q6ZUB0 917 aa12.6□□□□□ -0.39
SMARCA1-201ENST00000371121 FAM84BQ96KN1 310 aaPredicted RBP12.6□□□□□ -0.39
SMARCA1-201ENST00000371121 PWWP2AQ96N64 755 aa12.6□□□□□ -0.39
SMARCA1-201ENST00000371121 PCYOX1Q9UHG3 505 aa12.6□□□□□ -0.39
SMARCA1-201ENST00000371121 BPTFQ12830 3046 aa12.59□□□□□ -0.39
SMARCA1-201ENST00000371121 SMCO2A6NFE2 343 aa12.59□□□□□ -0.39
SMARCA1-201ENST00000371121 RXRBP28702 533 aa12.59□□□□□ -0.39
SMARCA1-201ENST00000371121 PRDX5P30044 214 aa12.59□□□□□ -0.39
SMARCA1-201ENST00000371121 CASP4P49662 377 aa12.59□□□□□ -0.39
SMARCA1-201ENST00000371121 WDR4P57081 412 aaKnown RBP12.59□□□□□ -0.39
SMARCA1-201ENST00000371121 SEPT2Q15019 361 aa12.59□□□□□ -0.39
SMARCA1-201ENST00000371121 PARP6Q2NL67 630 aa12.59□□□□□ -0.39
SMARCA1-201ENST00000371121 CERKLQ49MI3 558 aaPredicted RBP12.59□□□□□ -0.39
SMARCA1-201ENST00000371121 SBK1Q52WX2 424 aa12.59□□□□□ -0.39
SMARCA1-201ENST00000371121 DGKHQ86XP1 1220 aa12.59□□□□□ -0.39
SMARCA1-201ENST00000371121 KBTBD2Q8IY47 623 aa12.59□□□□□ -0.39
SMARCA1-201ENST00000371121 PIGOQ8TEQ8 1089 aa12.59□□□□□ -0.39
SMARCA1-201ENST00000371121 EZH1Q92800 747 aaPredicted RBP12.59□□□□□ -0.39
SMARCA1-201ENST00000371121 ZNF333Q96JL9 665 aa12.59□□□□□ -0.39
SMARCA1-201ENST00000371121 TSC22D3Q99576 134 aa12.59□□□□□ -0.39
SMARCA1-201ENST00000371121 TMEM47Q9BQJ4 181 aa12.59□□□□□ -0.39
SMARCA1-201ENST00000371121 MOV10L1Q9BXT6 1211 aaKnown RBP12.59□□□□□ -0.39
SMARCA1-201ENST00000371121 THAP2Q9H0W7 228 aa12.59□□□□□ -0.39
SMARCA1-201ENST00000371121 HAO1Q9UJM8 370 aa12.59□□□□□ -0.39
SMARCA1-201ENST00000371121 HDAC9Q9UKV0 1011 aa12.59□□□□□ -0.39
SMARCA1-201ENST00000371121 E9PMD0 336 aa12.59□□□□□ -0.39
SMARCA1-201ENST00000371121 GNAQP50148 359 aa12.59□□□□□ -0.39
SMARCA1-201ENST00000371121 RAD23BP54727 409 aa12.59□□□□□ -0.39
SMARCA1-201ENST00000371121 MTFR1Q15390 333 aa12.59□□□□□ -0.39
SMARCA1-201ENST00000371121 GALNT17Q6IS24 598 aa12.59□□□□□ -0.39
SMARCA1-201ENST00000371121 GLYCTKQ8IVS8 523 aa12.59□□□□□ -0.39
SMARCA1-201ENST00000371121 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.59□□□□□ -0.392e-7■■■□□ 15
SMARCA1-201ENST00000371121 SPIRE2Q8WWL2 714 aa12.59□□□□□ -0.39
SMARCA1-201ENST00000371121 UIMC1Q96RL1 719 aa12.59□□□□□ -0.39
SMARCA1-201ENST00000371121 CDC42EP4Q9H3Q1 356 aaKnown RBP12.59□□□□□ -0.39
SMARCA1-201ENST00000371121 IRAK4Q9NWZ3 460 aa12.59□□□□□ -0.39
SMARCA1-201ENST00000371121 RBBP6Q7Z6E9 1792 aaKnown RBP12.59□□□□□ -0.39
SMARCA1-201ENST00000371121 RASGRF2O14827 1237 aa12.59□□□□□ -0.39
SMARCA1-201ENST00000371121 RARGP13631 454 aa12.59□□□□□ -0.39
SMARCA1-201ENST00000371121 ACADSP16219 412 aa12.59□□□□□ -0.39
SMARCA1-201ENST00000371121 EPHB2P29323 1055 aa12.59□□□□□ -0.39
SMARCA1-201ENST00000371121 KCNA1Q09470 495 aa12.59□□□□□ -0.39
SMARCA1-201ENST00000371121 GIT2Q14161 759 aa12.59□□□□□ -0.39
SMARCA1-201ENST00000371121 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.59□□□□□ -0.39
SMARCA1-201ENST00000371121 CARD9Q9H257 536 aa12.59□□□□□ -0.39
SMARCA1-201ENST00000371121 USP40Q9NVE5 1235 aa12.59□□□□□ -0.39
SMARCA1-201ENST00000371121 CHORDC1Q9UHD1 332 aaPredicted RBP12.59□□□□□ -0.39
SMARCA1-201ENST00000371121 NEFHP12036 1026 aa12.58□□□□□ -0.4
SMARCA1-201ENST00000371121 IVDP26440 423 aa12.58□□□□□ -0.4
SMARCA1-201ENST00000371121 GCAP28676 217 aa12.58□□□□□ -0.4
SMARCA1-201ENST00000371121 KIF5BP33176 963 aa12.58□□□□□ -0.4
SMARCA1-201ENST00000371121 PDIA5Q14554 519 aa12.58□□□□□ -0.4
SMARCA1-201ENST00000371121 EXOC3L4Q17RC7 722 aa12.58□□□□□ -0.4
SMARCA1-201ENST00000371121 KHDC1Q4VXA5 237 aaKnown RBP12.58□□□□□ -0.4
SMARCA1-201ENST00000371121 TMEM154Q6P9G4 183 aa12.58□□□□□ -0.4
SMARCA1-201ENST00000371121 CALML4Q96GE6 196 aa12.58□□□□□ -0.4
SMARCA1-201ENST00000371121 TBC1D10AQ9BXI6 508 aa12.58□□□□□ -0.4
SMARCA1-201ENST00000371121 NMRK1Q9NWW6 199 aa12.58□□□□□ -0.4
SMARCA1-201ENST00000371121 MTMR7Q9Y216 660 aa12.58□□□□□ -0.4
SMARCA1-201ENST00000371121 ROBO3Q96MS0 1386 aa12.58□□□□□ -0.4
SMARCA1-201ENST00000371121 SMIM24O75264 130 aa12.58□□□□□ -0.4
SMARCA1-201ENST00000371121 FGFR1OPO95684 399 aaKnown RBP12.58□□□□□ -0.4
SMARCA1-201ENST00000371121 FAM26FQ5R3K3 315 aa12.58□□□□□ -0.4
SMARCA1-201ENST00000371121 EPM2AIP1Q7L775 607 aaPredicted RBP12.58□□□□□ -0.4
SMARCA1-201ENST00000371121 MARCH10Q8NA82 808 aaPredicted RBP12.58□□□□□ -0.4
SMARCA1-201ENST00000371121 SLC35C1Q96A29 364 aa12.58□□□□□ -0.4
SMARCA1-201ENST00000371121 SUN1O94901 812 aa12.58□□□□□ -0.4
SMARCA1-201ENST00000371121 LUC7L3O95232 432 aaKnown RBP12.58□□□□□ -0.4
SMARCA1-201ENST00000371121 RFC4P35249 363 aa12.58□□□□□ -0.4
SMARCA1-201ENST00000371121 DHX34Q14147 1143 aaKnown RBP12.58□□□□□ -0.4
SMARCA1-201ENST00000371121 CTTNQ14247 550 aaKnown RBP12.58□□□□□ -0.4
SMARCA1-201ENST00000371121 CALCRLQ16602 461 aa12.58□□□□□ -0.4
SMARCA1-201ENST00000371121 PLEKHG4Q58EX7 1191 aa12.58□□□□□ -0.4
SMARCA1-201ENST00000371121 MIGA2Q7L4E1 593 aa12.58□□□□□ -0.4
SMARCA1-201ENST00000371121 GBP7Q8N8V2 638 aaPredicted RBP12.58□□□□□ -0.4
SMARCA1-201ENST00000371121 ARHGEF2Q92974 986 aaKnown RBP12.58□□□□□ -0.4
SMARCA1-201ENST00000371121 KANSL3Q9P2N6 904 aa12.58□□□□□ -0.4
SMARCA1-201ENST00000371121 NIP7Q9Y221 180 aaKnown RBP eCLIP12.58□□□□□ -0.4
SMARCA1-201ENST00000371121 USP20Q9Y2K6 914 aa12.58□□□□□ -0.4
SMARCA1-201ENST00000371121 FRMPD4Q14CM0 1322 aa12.57□□□□□ -0.4
SMARCA1-201ENST00000371121 MROH7Q68CQ1 1323 aa12.57□□□□□ -0.4
SMARCA1-201ENST00000371121 FAM187AA6NFU0 413 aa12.57□□□□□ -0.4
SMARCA1-201ENST00000371121 LRRN2O75325 713 aa12.57□□□□□ -0.4
SMARCA1-201ENST00000371121 PYGBP11216 843 aa12.57□□□□□ -0.4
SMARCA1-201ENST00000371121 ALDH3A1P30838 453 aa12.57□□□□□ -0.4
SMARCA1-201ENST00000371121 KCNJ1P48048 391 aa12.57□□□□□ -0.4
SMARCA1-201ENST00000371121 LAMB3Q13751 1172 aa12.57□□□□□ -0.4
SMARCA1-201ENST00000371121 PABPC1LQ4VXU2 614 aaKnown RBP12.57□□□□□ -0.4
SMARCA1-201ENST00000371121 SNX29Q8TEQ0 813 aa12.57□□□□□ -0.4
SMARCA1-201ENST00000371121 U2AF1L4Q8WU68 220 aaKnown RBP12.57□□□□□ -0.4
SMARCA1-201ENST00000371121 CD101Q93033 1021 aa12.57□□□□□ -0.4
SMARCA1-201ENST00000371121 ANKRD27Q96NW4 1050 aa12.57□□□□□ -0.4
SMARCA1-201ENST00000371121 TGS1Q96RS0 853 aaKnown RBP12.57□□□□□ -0.4
SMARCA1-201ENST00000371121 GORASP1Q9BQQ3 440 aa12.57□□□□□ -0.4
SMARCA1-201ENST00000371121 HERPUD2Q9BSE4 406 aa12.57□□□□□ -0.4
SMARCA1-201ENST00000371121 SLCO1B3Q9NPD5 702 aa12.57□□□□□ -0.4
SMARCA1-201ENST00000371121 LUC7LQ9NQ29 371 aaKnown RBP12.57□□□□□ -0.4
SMARCA1-201ENST00000371121 CYLDQ9NQC7 956 aa12.57□□□□□ -0.4
SMARCA1-201ENST00000371121 INTUQ9ULD6 942 aa12.57□□□□□ -0.4
SMARCA1-201ENST00000371121 ABLIM1O14639 778 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms