RNA–Protein interactions for RNA: ENST00000354421.7

C11orf54-202, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 1,733 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-202ENST00000354421 DCP1AQ9NPI6 582 aaPredicted RBP8.18□□□□□ -1.1
C11orf54-202ENST00000354421 BLOC1S4Q9NUP1 217 aa8.18□□□□□ -1.1
C11orf54-202ENST00000354421 AIPL1Q9NZN9 384 aa8.18□□□□□ -1.1
C11orf54-202ENST00000354421 ARPP21Q9UBL0 812 aaPredicted RBP8.18□□□□□ -1.1
C11orf54-202ENST00000354421 ABCF2Q9UG63 623 aa8.18□□□□□ -1.1
C11orf54-202ENST00000354421 TPX2Q9ULW0 747 aaKnown RBP8.18□□□□□ -1.1
C11orf54-202ENST00000354421 ZBTB1Q9Y2K1 713 aa8.18□□□□□ -1.1
C11orf54-202ENST00000354421 LEMD3Q9Y2U8 911 aa8.18□□□□□ -1.1
C11orf54-202ENST00000354421 ZDBF2Q9HCK1 2354 aa8.18□□□□□ -1.1
C11orf54-202ENST00000354421 SCN7AQ01118 1682 aa8.18□□□□□ -1.1
C11orf54-202ENST00000354421 NCOR1O75376 2440 aa8.18□□□□□ -1.1
C11orf54-202ENST00000354421 TSPY2A6NKD2 308 aa8.17□□□□□ -1.1
C11orf54-202ENST00000354421 CCDC188H7C350 402 aa8.17□□□□□ -1.1
C11orf54-202ENST00000354421 POLRMTO00411 1230 aaKnown RBP8.17□□□□□ -1.1
C11orf54-202ENST00000354421 MGRN1O60291 552 aa8.17□□□□□ -1.1
C11orf54-202ENST00000354421 KIF4AO95239 1232 aa8.17□□□□□ -1.1
C11orf54-202ENST00000354421 ZBTB48P10074 688 aaPredicted RBP8.17□□□□□ -1.1
C11orf54-202ENST00000354421 GCFC2P16383 781 aaKnown RBP8.17□□□□□ -1.1
C11orf54-202ENST00000354421 ITGB8P26012 769 aa8.17□□□□□ -1.1
C11orf54-202ENST00000354421 EPS15P42566 896 aa8.17□□□□□ -1.1
C11orf54-202ENST00000354421 USP11P51784 963 aa8.17□□□□□ -1.1
C11orf54-202ENST00000354421 MARSP56192 900 aaKnown RBP8.17□□□□□ -1.1
C11orf54-202ENST00000354421 RPS6KA1Q15418 735 aa8.17□□□□□ -1.1
C11orf54-202ENST00000354421 TRADDQ15628 312 aa8.17□□□□□ -1.1
C11orf54-202ENST00000354421 IFI16Q16666 785 aaKnown RBP8.17□□□□□ -1.1
C11orf54-202ENST00000354421 QPCTQ16769 361 aa8.17□□□□□ -1.1
C11orf54-202ENST00000354421 NBPF9Q3BBW0 867 aa8.17□□□□□ -1.1
C11orf54-202ENST00000354421 PARP10Q53GL7 1025 aa8.17□□□□□ -1.1
C11orf54-202ENST00000354421 TDRD12Q587J7 1177 aaKnown RBP8.17□□□□□ -1.1
C11orf54-202ENST00000354421 FAM83BQ5T0W9 1011 aa8.17□□□□□ -1.1
C11orf54-202ENST00000354421 TMC4Q7Z404 712 aa8.17□□□□□ -1.1
C11orf54-202ENST00000354421 BANK1Q8NDB2 785 aa8.17□□□□□ -1.1
C11orf54-202ENST00000354421 SEC14L1Q92503 715 aa8.17□□□□□ -1.1
C11orf54-202ENST00000354421 CCT6BQ92526 530 aa8.17□□□□□ -1.1
C11orf54-202ENST00000354421 RAPGEF5Q92565 580 aa8.17□□□□□ -1.1
C11orf54-202ENST00000354421 MIEF2Q96C03 454 aa8.17□□□□□ -1.1
C11orf54-202ENST00000354421 SCARF2Q96GP6 870 aaPredicted RBP8.17□□□□□ -1.1
C11orf54-202ENST00000354421 CEP63Q96MT8 703 aa8.17□□□□□ -1.1
C11orf54-202ENST00000354421 PNMA5Q96PV4 448 aa8.17□□□□□ -1.1
C11orf54-202ENST00000354421 SLC4A9Q96Q91 983 aa8.17□□□□□ -1.1
C11orf54-202ENST00000354421 KRTAP9-9Q9BYP9 154 aa8.17□□□□□ -1.1
C11orf54-202ENST00000354421 KRTAP9-4Q9BYQ2 154 aa8.17□□□□□ -1.1
C11orf54-202ENST00000354421 ZMYND12Q9H0C1 365 aa8.17□□□□□ -1.1
C11orf54-202ENST00000354421 CNOT10Q9H9A5 744 aaKnown RBP8.17□□□□□ -1.1
C11orf54-202ENST00000354421 ATP6V0A4Q9HBG4 840 aa8.17□□□□□ -1.1
C11orf54-202ENST00000354421 POLD4Q9HCU8 107 aa8.17□□□□□ -1.1
C11orf54-202ENST00000354421 PPANQ9NQ55 473 aaKnown RBP8.17□□□□□ -1.1
C11orf54-202ENST00000354421 MAD2L2Q9UI95 211 aa8.17□□□□□ -1.1
C11orf54-202ENST00000354421 ITGB4P16144 1822 aa8.17□□□□□ -1.1
C11orf54-202ENST00000354421 ATAD5Q96QE3 1844 aa8.17□□□□□ -1.1
C11orf54-202ENST00000354421 SLC35F4A4IF30 521 aa8.17□□□□□ -1.1
C11orf54-202ENST00000354421 PALM3A6NDB9 673 aaPredicted RBP8.17□□□□□ -1.1
C11orf54-202ENST00000354421 FZD9O00144 591 aa8.17□□□□□ -1.1
C11orf54-202ENST00000354421 TRANK1O15050 2925 aa8.17□□□□□ -1.1
C11orf54-202ENST00000354421 PPIP5K2O43314 1243 aa8.17□□□□□ -1.1
C11orf54-202ENST00000354421 GSTA1P08263 222 aa8.17□□□□□ -1.1
C11orf54-202ENST00000354421 EZRP15311 586 aaKnown RBP8.17□□□□□ -1.1
C11orf54-202ENST00000354421 HPDP32754 393 aaPredicted RBP8.17□□□□□ -1.1
C11orf54-202ENST00000354421 SCTRP47872 440 aa8.17□□□□□ -1.1
C11orf54-202ENST00000354421 HLTFQ14527 1009 aaKnown RBP eCLIP8.17□□□□□ -1.1
C11orf54-202ENST00000354421 CRYMQ14894 314 aa8.17□□□□□ -1.1
C11orf54-202ENST00000354421 SEPT2Q15019 361 aa8.17□□□□□ -1.1
C11orf54-202ENST00000354421 ZCWPW2Q504Y3 356 aa8.17□□□□□ -1.1
C11orf54-202ENST00000354421 Q6ZVU0 165 aa8.17□□□□□ -1.1
C11orf54-202ENST00000354421 SV2AQ7L0J3 742 aa8.17□□□□□ -1.1
C11orf54-202ENST00000354421 ERMP1Q7Z2K6 904 aa8.17□□□□□ -1.1
C11orf54-202ENST00000354421 KLHL7Q8IXQ5 586 aa8.17□□□□□ -1.1
C11orf54-202ENST00000354421 RASGEF1CQ8N431 466 aa8.17□□□□□ -1.1
C11orf54-202ENST00000354421 PNMA1Q8ND90 353 aa8.17□□□□□ -1.1
C11orf54-202ENST00000354421 HPS3Q969F9 1004 aa8.17□□□□□ -1.1
C11orf54-202ENST00000354421 ZNF622Q969S3 477 aaKnown RBP eCLIP8.17□□□□□ -1.1
C11orf54-202ENST00000354421 TLCD1Q96CP7 247 aa8.17□□□□□ -1.1
C11orf54-202ENST00000354421 KRTAP4-12Q9BQ66 201 aa8.17□□□□□ -1.1
C11orf54-202ENST00000354421 LSM14BQ9BX40 385 aaKnown RBP8.17□□□□□ -1.1
C11orf54-202ENST00000354421 SLITRK6Q9H5Y7 841 aa8.17□□□□□ -1.1
C11orf54-202ENST00000354421 HAUS2Q9NVX0 235 aa8.17□□□□□ -1.1
C11orf54-202ENST00000354421 CNOT8Q9UFF9 292 aaKnown RBP8.17□□□□□ -1.1
C11orf54-202ENST00000354421 SWAP70Q9UH65 585 aa8.17□□□□□ -1.1
C11orf54-202ENST00000354421 CDV3Q9UKY7 258 aaKnown RBP8.17□□□□□ -1.1
C11orf54-202ENST00000354421 COL4A3BPQ9Y5P4 624 aa8.17□□□□□ -1.1
C11orf54-202ENST00000354421 EPG5Q9HCE0 2579 aa8.16□□□□□ -1.1
C11orf54-202ENST00000354421 MAST2Q6P0Q8 1798 aa8.16□□□□□ -1.1
C11orf54-202ENST00000354421 A0A087X0T9 212 aa8.16□□□□□ -1.1
C11orf54-202ENST00000354421 LOC102724428A0A0B4J2F2 783 aa8.16□□□□□ -1.1
C11orf54-202ENST00000354421 FIGNL2A6NMB9 653 aa8.16□□□□□ -1.1
C11orf54-202ENST00000354421 ARHGEF15O94989 841 aa8.16□□□□□ -1.1
C11orf54-202ENST00000354421 GNA14O95837 355 aa8.16□□□□□ -1.1
C11orf54-202ENST00000354421 FAM228BP0C875 321 aa8.16□□□□□ -1.1
C11orf54-202ENST00000354421 CYP2D6P10635 497 aa8.16□□□□□ -1.1
C11orf54-202ENST00000354421 PDHBP11177 359 aa8.16□□□□□ -1.1
C11orf54-202ENST00000354421 ANXA13P27216 316 aa8.16□□□□□ -1.1
C11orf54-202ENST00000354421 CTNNA1P35221 906 aaKnown RBP8.16□□□□□ -1.1
C11orf54-202ENST00000354421 GYG1P46976 350 aa8.16□□□□□ -1.1
C11orf54-202ENST00000354421 EIF3BP55884 814 aaKnown RBP8.16□□□□□ -1.1
C11orf54-202ENST00000354421 SIK1P57059 783 aa8.16□□□□□ -1.1
C11orf54-202ENST00000354421 ASIC2Q16515 512 aa8.16□□□□□ -1.1
C11orf54-202ENST00000354421 KIAA0753Q2KHM9 967 aa8.16□□□□□ -1.1
C11orf54-202ENST00000354421 SPRED3Q2MJR0 410 aa8.16□□□□□ -1.1
C11orf54-202ENST00000354421 TMEM119Q4V9L6 283 aa8.16□□□□□ -1.1
C11orf54-202ENST00000354421 GKAP1Q5VSY0 366 aaPredicted RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms