RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 GPC3P51654 580 aa5.68□□□□□ -1.5
LRIT3-201ENST00000327908 LAMTOR4Q0VGL1 99 aa5.68□□□□□ -1.5
LRIT3-201ENST00000327908 CETN1Q12798 172 aa5.68□□□□□ -1.5
LRIT3-201ENST00000327908 DPYDQ12882 1025 aa5.68□□□□□ -1.5
LRIT3-201ENST00000327908 MFSD5Q6N075 450 aa5.68□□□□□ -1.5
LRIT3-201ENST00000327908 CATSPER4Q7RTX7 472 aa5.68□□□□□ -1.5
LRIT3-201ENST00000327908 MAP4K3Q8IVH8 894 aa5.68□□□□□ -1.5
LRIT3-201ENST00000327908 BICD1Q96G01 975 aa5.68□□□□□ -1.5
LRIT3-201ENST00000327908 UROC1Q96N76 676 aa5.68□□□□□ -1.5
LRIT3-201ENST00000327908 NOC4LQ9BVI4 516 aaKnown RBP5.68□□□□□ -1.5
LRIT3-201ENST00000327908 RNPEPQ9H4A4 650 aa5.68□□□□□ -1.5
LRIT3-201ENST00000327908 IL23AQ9NPF7 189 aa5.68□□□□□ -1.5
LRIT3-201ENST00000327908 ARHGAP28Q9P2N2 729 aa5.68□□□□□ -1.5
LRIT3-201ENST00000327908 R3HCC1Q9Y3T6 440 aaKnown RBP5.68□□□□□ -1.5
LRIT3-201ENST00000327908 COL4A6Q14031 1691 aa5.68□□□□□ -1.5
LRIT3-201ENST00000327908 LRRIQ4A6NIV6 560 aa5.67□□□□□ -1.5
LRIT3-201ENST00000327908 CCDC169A6NNP5 214 aa5.67□□□□□ -1.5
LRIT3-201ENST00000327908 E9PMD0 336 aa5.67□□□□□ -1.5
LRIT3-201ENST00000327908 MYCNP04198 464 aaPredicted RBP5.67□□□□□ -1.5
LRIT3-201ENST00000327908 FAM163BP0C2L3 166 aa5.67□□□□□ -1.5
LRIT3-201ENST00000327908 KRT13P13646 458 aa5.67□□□□□ -1.5
LRIT3-201ENST00000327908 KCNJ6P48051 423 aa5.67□□□□□ -1.5
LRIT3-201ENST00000327908 LIG4P49917 911 aa5.67□□□□□ -1.5
LRIT3-201ENST00000327908 TPD52L1Q16890 204 aaPredicted RBP5.67□□□□□ -1.5
LRIT3-201ENST00000327908 FAM173BQ6P4H8 233 aa5.67□□□□□ -1.5
LRIT3-201ENST00000327908 SPATA20Q8TB22 786 aa5.67□□□□□ -1.5
LRIT3-201ENST00000327908 CACTINQ8WUQ7 758 aaKnown RBP5.67□□□□□ -1.5
LRIT3-201ENST00000327908 GBP3Q9H0R5 595 aa5.67□□□□□ -1.5
LRIT3-201ENST00000327908 AAASQ9NRG9 546 aa5.67□□□□□ -1.5
LRIT3-201ENST00000327908 ATP11BQ9Y2G3 1177 aa5.67□□□□□ -1.5
LRIT3-201ENST00000327908 TMEM265A0A087WTH1 108 aa5.67□□□□□ -1.5
LRIT3-201ENST00000327908 CETN3O15182 167 aa5.67□□□□□ -1.5
LRIT3-201ENST00000327908 TOM1L1O75674 476 aa5.67□□□□□ -1.5
LRIT3-201ENST00000327908 CCNE1P24864 410 aa5.67□□□□□ -1.5
LRIT3-201ENST00000327908 GTF2H1P32780 548 aa5.67□□□□□ -1.5
LRIT3-201ENST00000327908 THPOP40225 353 aa5.67□□□□□ -1.5
LRIT3-201ENST00000327908 FPGSQ05932 587 aa5.67□□□□□ -1.5
LRIT3-201ENST00000327908 PRPF4BQ13523 1007 aaKnown RBP5.67□□□□□ -1.5
LRIT3-201ENST00000327908 IKBKEQ14164 716 aa5.67□□□□□ -1.5
LRIT3-201ENST00000327908 UGCGQ16739 394 aa5.67□□□□□ -1.5
LRIT3-201ENST00000327908 PDXDC1Q6P996 788 aa5.67□□□□□ -1.5
LRIT3-201ENST00000327908 ELMSAN1Q6PJG2 1045 aa5.67□□□□□ -1.5
LRIT3-201ENST00000327908 NPAS4Q8IUM7 802 aa5.67□□□□□ -1.5
LRIT3-201ENST00000327908 GPR65Q8IYL9 337 aa5.67□□□□□ -1.5
LRIT3-201ENST00000327908 KIAA0319LQ8IZA0 1049 aa5.67□□□□□ -1.5
LRIT3-201ENST00000327908 CCDC150Q8NCX0 1101 aa5.67□□□□□ -1.5
LRIT3-201ENST00000327908 ZNF507Q8TCN5 953 aa5.67□□□□□ -1.5
LRIT3-201ENST00000327908 PAWRQ96IZ0 340 aaKnown RBP5.67□□□□□ -1.5
LRIT3-201ENST00000327908 CTAGE1Q96RT6 745 aa5.67□□□□□ -1.5
LRIT3-201ENST00000327908 CEP89Q96ST8 783 aa5.67□□□□□ -1.5
LRIT3-201ENST00000327908 REEP2Q9BRK0 252 aa5.67□□□□□ -1.5
LRIT3-201ENST00000327908 SUGCTQ9HAC7 445 aa5.67□□□□□ -1.5
LRIT3-201ENST00000327908 SETD4Q9NVD3 440 aa5.67□□□□□ -1.5
LRIT3-201ENST00000327908 CDY2AQ9Y6F7 541 aa5.67□□□□□ -1.5
LRIT3-201ENST00000327908 KAT6AQ92794 2004 aa5.67□□□□□ -1.5
LRIT3-201ENST00000327908 TANC1Q9C0D5 1861 aa5.67□□□□□ -1.5
LRIT3-201ENST00000327908 MYMKA6NI61 221 aa5.67□□□□□ -1.5
LRIT3-201ENST00000327908 GOLGA6L6A8MZA4 724 aa5.67□□□□□ -1.5
LRIT3-201ENST00000327908 EPB41P11171 864 aaKnown RBP5.67□□□□□ -1.5
LRIT3-201ENST00000327908 YWHAEP62258 255 aaKnown RBP5.67□□□□□ -1.5
LRIT3-201ENST00000327908 IGBP1P78318 339 aa5.67□□□□□ -1.5
LRIT3-201ENST00000327908 CREMQ03060 361 aa5.67□□□□□ -1.5
LRIT3-201ENST00000327908 TLE2Q04725 743 aa5.67□□□□□ -1.5
LRIT3-201ENST00000327908 MGAT3Q09327 533 aa5.67□□□□□ -1.5
LRIT3-201ENST00000327908 TRIM71Q2Q1W2 868 aaKnown RBP5.67□□□□□ -1.5
LRIT3-201ENST00000327908 GDF6Q6KF10 455 aaPredicted RBP5.67□□□□□ -1.5
LRIT3-201ENST00000327908 MPZL3Q6UWV2 235 aa5.67□□□□□ -1.5
LRIT3-201ENST00000327908 HAUS6Q7Z4H7 955 aa5.67□□□□□ -1.5
LRIT3-201ENST00000327908 PDILTQ8N807 584 aa5.67□□□□□ -1.5
LRIT3-201ENST00000327908 FZD8Q9H461 694 aa5.67□□□□□ -1.5
LRIT3-201ENST00000327908 LRFN2Q9ULH4 789 aa5.67□□□□□ -1.5
LRIT3-201ENST00000327908 SSX2IPQ9Y2D8 614 aa5.67□□□□□ -1.5
LRIT3-201ENST00000327908 FRMD4BQ9Y2L6 1034 aa5.67□□□□□ -1.5
LRIT3-201ENST00000327908 GIT1Q9Y2X7 761 aa5.67□□□□□ -1.5
LRIT3-201ENST00000327908 SMCHD1A6NHR9 2005 aa5.67□□□□□ -1.5
LRIT3-201ENST00000327908 DOCK3Q8IZD9 2030 aa5.67□□□□□ -1.5
LRIT3-201ENST00000327908 WNT7AO00755 349 aa5.66□□□□□ -1.5
LRIT3-201ENST00000327908 IKBKBO14920 756 aa5.66□□□□□ -1.5
LRIT3-201ENST00000327908 ADAMTS3O15072 1205 aa5.66□□□□□ -1.5
LRIT3-201ENST00000327908 P4HA2O15460 535 aa5.66□□□□□ -1.5
LRIT3-201ENST00000327908 CBFA2T2O43439 604 aa5.66□□□□□ -1.5
LRIT3-201ENST00000327908 ZNF623O75123 536 aa5.66□□□□□ -1.5
LRIT3-201ENST00000327908 GCNT3O95395 438 aa5.66□□□□□ -1.5
LRIT3-201ENST00000327908 ATP4AP20648 1035 aa5.66□□□□□ -1.5
LRIT3-201ENST00000327908 GLRA2P23416 452 aa5.66□□□□□ -1.5
LRIT3-201ENST00000327908 SLC27A1Q6PCB7 646 aa5.66□□□□□ -1.5
LRIT3-201ENST00000327908 RNF149Q8NC42 400 aa5.66□□□□□ -1.5
LRIT3-201ENST00000327908 PIGOQ8TEQ8 1089 aa5.66□□□□□ -1.5
LRIT3-201ENST00000327908 PRPF31Q8WWY3 499 aaKnown RBP5.66□□□□□ -1.5
LRIT3-201ENST00000327908 DNAJC19Q96DA6 116 aa5.66□□□□□ -1.5
LRIT3-201ENST00000327908 DDX27Q96GQ7 796 aaKnown RBP5.66□□□□□ -1.5
LRIT3-201ENST00000327908 TRIM6Q9C030 488 aaPredicted RBP5.66□□□□□ -1.5
LRIT3-201ENST00000327908 ZHX3Q9H4I2 956 aa5.66□□□□□ -1.5
LRIT3-201ENST00000327908 ERVK-5Q9HDB9 667 aa5.66□□□□□ -1.5
LRIT3-201ENST00000327908 RWDD2AQ9UIY3 292 aa5.66□□□□□ -1.5
LRIT3-201ENST00000327908 MYADML2A6NDP7 307 aa5.66□□□□□ -1.5
LRIT3-201ENST00000327908 CCDC85CA6NKD9 419 aa5.66□□□□□ -1.5
LRIT3-201ENST00000327908 CLTAP09496 248 aa5.66□□□□□ -1.5
LRIT3-201ENST00000327908 CKBP12277 381 aa5.66□□□□□ -1.5
LRIT3-201ENST00000327908 ATF7P17544 494 aaPredicted RBP5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms