RNA–Protein interactions for RNA: ENST00000324450.10

VEGFA-202, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-202ENST00000324450 PLCB3Q01970 1234 aa28.07■■■□□ 2.08
VEGFA-202ENST00000324450 PDE12Q6L8Q7 609 aaKnown RBP28.07■■■□□ 2.08
VEGFA-202ENST00000324450 KCNT2Q6UVM3 1135 aa28.07■■■□□ 2.08
VEGFA-202ENST00000324450 MICAL1Q8TDZ2 1067 aa28.07■■■□□ 2.08
VEGFA-202ENST00000324450 PIGOQ8TEQ8 1089 aa28.07■■■□□ 2.08
VEGFA-202ENST00000324450 PUF60Q9UHX1 559 aaKnown RBP28.07■■■□□ 2.08
VEGFA-202ENST00000324450 LZTS1Q9Y250 596 aa28.07■■■□□ 2.08
VEGFA-202ENST00000324450 TTC28Q96AY4 2481 aa28.07■■■□□ 2.08
VEGFA-202ENST00000324450 TFDP1Q14186 410 aa28.06■■■□□ 2.08
VEGFA-202ENST00000324450 PCBP1Q15365 356 aaKnown RBP eCLIP28.06■■■□□ 2.084e-7■■□□□ 11.7
VEGFA-202ENST00000324450 MINDY3Q9H8M7 445 aa28.06■■■□□ 2.08
VEGFA-202ENST00000324450 ZNF623O75123 536 aa28.05■■■□□ 2.08
VEGFA-202ENST00000324450 SPATA31C1P0DKV0 1188 aa28.05■■■□□ 2.08
VEGFA-202ENST00000324450 U2AF2P26368 475 aaKnown RBP eCLIP28.05■■■□□ 2.082e-48■□□□□ 11.2
VEGFA-202ENST00000324450 GTF2F1P35269 517 aaKnown RBP eCLIP28.05■■■□□ 2.083e-11■■■■■ 42.3
VEGFA-202ENST00000324450 LTBRP36941 435 aa28.05■■■□□ 2.08
VEGFA-202ENST00000324450 GLB1LQ6UWU2 654 aa28.05■■■□□ 2.08
VEGFA-202ENST00000324450 ADGRD2Q7Z7M1 963 aa28.05■■■□□ 2.08
VEGFA-202ENST00000324450 MRPS27Q92552 414 aaKnown RBP28.05■■■□□ 2.08
VEGFA-202ENST00000324450 PGBD4Q96DM1 585 aa28.05■■■□□ 2.08
VEGFA-202ENST00000324450 POLR3CQ9BUI4 534 aaPredicted RBP28.05■■■□□ 2.08
VEGFA-202ENST00000324450 PLXNA4Q9HCM2 1894 aa28.05■■■□□ 2.08
VEGFA-202ENST00000324450 ERLIN2O94905 339 aa28.04■■■□□ 2.08
VEGFA-202ENST00000324450 IL9P15248 144 aa28.04■■■□□ 2.08
VEGFA-202ENST00000324450 NRIP1P48552 1158 aa28.04■■■□□ 2.08
VEGFA-202ENST00000324450 KRT17Q04695 432 aa28.04■■■□□ 2.08
VEGFA-202ENST00000324450 POU5F1BQ06416 359 aa28.04■■■□□ 2.08
VEGFA-202ENST00000324450 ADAM15Q13444 863 aa28.04■■■□□ 2.08
VEGFA-202ENST00000324450 CATSPER3Q86XQ3 398 aa28.04■■■□□ 2.08
VEGFA-202ENST00000324450 SPG21Q9NZD8 308 aa28.04■■■□□ 2.08
VEGFA-202ENST00000324450 PCDHB2Q9Y5E7 798 aa28.04■■■□□ 2.08
VEGFA-202ENST00000324450 ARL2P36404 184 aa28.03■■■□□ 2.08
VEGFA-202ENST00000324450 NDUFV1P49821 464 aa28.03■■■□□ 2.08
VEGFA-202ENST00000324450 PTENP60484 403 aa28.03■■■□□ 2.08
VEGFA-202ENST00000324450 FAM178BQ8IXR5 827 aa28.03■■■□□ 2.08
VEGFA-202ENST00000324450 EFHBQ8N7U6 833 aa28.03■■■□□ 2.08
VEGFA-202ENST00000324450 LPPQ93052 612 aa28.03■■■□□ 2.08
VEGFA-202ENST00000324450 NACC1Q96RE7 527 aa28.03■■■□□ 2.08
VEGFA-202ENST00000324450 TLE6Q9H808 572 aa28.03■■■□□ 2.08
VEGFA-202ENST00000324450 DBR1Q9UK59 544 aaKnown RBP28.03■■■□□ 2.08
VEGFA-202ENST00000324450 FSD2A1L4K1 749 aa28.02■■■□□ 2.08
VEGFA-202ENST00000324450 CARNS1A5YM72 827 aa28.02■■■□□ 2.08
VEGFA-202ENST00000324450 LINC01565O15544 149 aa28.02■■■□□ 2.08
VEGFA-202ENST00000324450 USO1O60763 962 aaKnown RBP28.02■■■□□ 2.08
VEGFA-202ENST00000324450 MED24O75448 989 aa28.02■■■□□ 2.08
VEGFA-202ENST00000324450 RPA1P27694 616 aa28.02■■■□□ 2.08
VEGFA-202ENST00000324450 AXLP30530 894 aa28.02■■■□□ 2.08
VEGFA-202ENST00000324450 PBX3P40426 434 aa28.02■■■□□ 2.08
VEGFA-202ENST00000324450 MCM2P49736 904 aa28.02■■■□□ 2.08
VEGFA-202ENST00000324450 ERVFC1P60507 584 aa28.02■■■□□ 2.08
VEGFA-202ENST00000324450 DLX2Q07687 328 aaPredicted RBP28.02■■■□□ 2.08
VEGFA-202ENST00000324450 NCBP1Q09161 790 aaKnown RBP28.02■■■□□ 2.08
VEGFA-202ENST00000324450 LONRF3Q496Y0 759 aa28.02■■■□□ 2.08
VEGFA-202ENST00000324450 HAUS3Q68CZ6 603 aa28.02■■■□□ 2.08
VEGFA-202ENST00000324450 RBM23Q86U06 439 aaKnown RBP28.02■■■□□ 2.08
VEGFA-202ENST00000324450 IFNLR1Q8IU57 520 aaPredicted RBP28.02■■■□□ 2.08
VEGFA-202ENST00000324450 TMX3Q96JJ7 454 aa28.02■■■□□ 2.08
VEGFA-202ENST00000324450 PCDHGC5Q9Y5F6 944 aa28.02■■■□□ 2.08
VEGFA-202ENST00000324450 BRWD1Q9NSI6 2320 aa28.02■■■□□ 2.08
VEGFA-202ENST00000324450 A0A087WWV3 80 aa28.01■■■□□ 2.07
VEGFA-202ENST00000324450 FSCN2O14926 492 aa28.01■■■□□ 2.07
VEGFA-202ENST00000324450 TBX10O75333 385 aa28.01■■■□□ 2.07
VEGFA-202ENST00000324450 HOXA11P31270 313 aaPredicted RBP28.01■■■□□ 2.07
VEGFA-202ENST00000324450 ALDH7A1P49419 539 aaKnown RBP28.01■■■□□ 2.07
VEGFA-202ENST00000324450 NOMO2Q5JPE7 1267 aa28.01■■■□□ 2.07
VEGFA-202ENST00000324450 SLC39A11Q8N1S5 342 aa28.01■■■□□ 2.07
VEGFA-202ENST00000324450 MCPH1Q8NEM0 835 aa28.01■■■□□ 2.07
VEGFA-202ENST00000324450 ASAP3Q8TDY4 903 aa28.01■■■□□ 2.07
VEGFA-202ENST00000324450 CDCA3Q99618 268 aaPredicted RBP28.01■■■□□ 2.07
VEGFA-202ENST00000324450 POLR3FQ9H1D9 316 aaPredicted RBP28.01■■■□□ 2.07
VEGFA-202ENST00000324450 NGRNQ9NPE2 291 aaKnown RBP28.01■■■□□ 2.07
VEGFA-202ENST00000324450 ENTPD7Q9NQZ7 604 aa28.01■■■□□ 2.07
VEGFA-202ENST00000324450 INO80B-WBP1J3KQ70 363 aa28■■■□□ 2.07
VEGFA-202ENST00000324450 MUTP22033 750 aa28■■■□□ 2.07
VEGFA-202ENST00000324450 FXR2P51116 673 aaKnown RBP eCLIP28■■■□□ 2.076e-18■■■□□ 18.2
VEGFA-202ENST00000324450 BCAR1P56945 870 aa28■■■□□ 2.07
VEGFA-202ENST00000324450 CAPSQ13938 189 aa28■■■□□ 2.07
VEGFA-202ENST00000324450 NBR1Q14596 966 aa28■■■□□ 2.07
VEGFA-202ENST00000324450 CLUL1Q15846 466 aa28■■■□□ 2.07
VEGFA-202ENST00000324450 PLPP4Q5VZY2 271 aa28■■■□□ 2.07
VEGFA-202ENST00000324450 MRPL10Q7Z7H8 261 aaKnown RBP28■■■□□ 2.07
VEGFA-202ENST00000324450 CNNM3Q8NE01 707 aa28■■■□□ 2.07
VEGFA-202ENST00000324450 URGCPQ8TCY9 931 aa28■■■□□ 2.07
VEGFA-202ENST00000324450 CCDC51Q96ER9 411 aa28■■■□□ 2.07
VEGFA-202ENST00000324450 TCF25Q9BQ70 676 aa28■■■□□ 2.07
VEGFA-202ENST00000324450 NFKBIZQ9BYH8 718 aa28■■■□□ 2.07
VEGFA-202ENST00000324450 CD207Q9UJ71 328 aa28■■■□□ 2.07
VEGFA-202ENST00000324450 INPP5FQ9Y2H2 1132 aa28■■■□□ 2.07
VEGFA-202ENST00000324450 MYO7AQ13402 2215 aa27.99■■■□□ 2.07
VEGFA-202ENST00000324450 CNTNAP2Q9UHC6 1331 aa27.99■■■□□ 2.07
VEGFA-202ENST00000324450 MEIS3P2A8K0S8 358 aa27.99■■■□□ 2.07
VEGFA-202ENST00000324450 TSPAN1O60635 241 aa27.99■■■□□ 2.07
VEGFA-202ENST00000324450 OFD1O75665 1012 aa27.99■■■□□ 2.07
VEGFA-202ENST00000324450 GLRA2P23416 452 aa27.99■■■□□ 2.07
VEGFA-202ENST00000324450 RNASELQ05823 741 aaKnown RBP27.99■■■□□ 2.07
VEGFA-202ENST00000324450 SMAD4Q13485 552 aaKnown RBP27.99■■■□□ 2.07
VEGFA-202ENST00000324450 NOTUMQ6P988 496 aa27.99■■■□□ 2.07
VEGFA-202ENST00000324450 POTEGQ6S5H5 508 aa27.99■■■□□ 2.07
VEGFA-202ENST00000324450 C4orf32Q8N8J7 132 aa27.99■■■□□ 2.07
VEGFA-202ENST00000324450 TBC1D32Q96NH3 1257 aa27.99■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 144.1 ms