RNA–Protein interactions for RNA: ENST00000322535.10

SF3B2-201, Transcript of splicing factor 3b subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B2, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-201ENST00000322535 ERCC5P28715 1186 aaPredicted RBP11.09□□□□□ -0.63
SF3B2-201ENST00000322535 CDK8P49336 464 aa11.09□□□□□ -0.63
SF3B2-201ENST00000322535 NCALDP61601 193 aa11.09□□□□□ -0.63
SF3B2-201ENST00000322535 SEC23AQ15436 765 aa11.09□□□□□ -0.63
SF3B2-201ENST00000322535 OLFML2BQ68BL8 750 aa11.09□□□□□ -0.63
SF3B2-201ENST00000322535 KRT40Q6A162 431 aa11.09□□□□□ -0.63
SF3B2-201ENST00000322535 CACTIN-AS1Q8N1I8 211 aa11.09□□□□□ -0.63
SF3B2-201ENST00000322535 SH3GL1Q99961 368 aa11.09□□□□□ -0.63
SF3B2-201ENST00000322535 LRRC4CQ9HCJ2 640 aa11.09□□□□□ -0.63
SF3B2-201ENST00000322535 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.09□□□□□ -0.63
SF3B2-201ENST00000322535 ZNF711Q9Y462 761 aa11.09□□□□□ -0.63
SF3B2-201ENST00000322535 MAGEA13PA6NCF6 341 aa11.09□□□□□ -0.63
SF3B2-201ENST00000322535 DDTLA6NHG4 134 aaPredicted RBP11.09□□□□□ -0.63
SF3B2-201ENST00000322535 PPP6R2O75170 966 aa11.09□□□□□ -0.63
SF3B2-201ENST00000322535 VDRP11473 427 aa11.09□□□□□ -0.63
SF3B2-201ENST00000322535 CYLC1P35663 651 aaPredicted RBP11.09□□□□□ -0.63
SF3B2-201ENST00000322535 IARSP41252 1262 aaKnown RBP11.09□□□□□ -0.63
SF3B2-201ENST00000322535 CCNG1P51959 295 aa11.09□□□□□ -0.63
SF3B2-201ENST00000322535 RTN1Q16799 776 aa11.09□□□□□ -0.63
SF3B2-201ENST00000322535 PTPROQ16827 1216 aa11.09□□□□□ -0.63
SF3B2-201ENST00000322535 DALRD3Q5D0E6 543 aaKnown RBP11.09□□□□□ -0.63
SF3B2-201ENST00000322535 POTEEQ6S8J3 1075 aa11.09□□□□□ -0.63
SF3B2-201ENST00000322535 CYP4X1Q8N118 509 aa11.09□□□□□ -0.63
SF3B2-201ENST00000322535 DDX12PQ92771 950 aa11.09□□□□□ -0.63
SF3B2-201ENST00000322535 AZIN2Q96A70 460 aa11.09□□□□□ -0.63
SF3B2-201ENST00000322535 BLZF1Q9H2G9 400 aa11.09□□□□□ -0.63
SF3B2-201ENST00000322535 NHEJ1Q9H9Q4 299 aaPredicted RBP11.09□□□□□ -0.63
SF3B2-201ENST00000322535 AGPAT5Q9NUQ2 364 aa11.09□□□□□ -0.63
SF3B2-201ENST00000322535 VPS54Q9P1Q0 977 aa11.09□□□□□ -0.63
SF3B2-201ENST00000322535 PNMA3Q9UL41 463 aa11.09□□□□□ -0.63
SF3B2-201ENST00000322535 COL4A5P29400 1685 aa11.09□□□□□ -0.63
SF3B2-201ENST00000322535 CETN3O15182 167 aa11.08□□□□□ -0.63
SF3B2-201ENST00000322535 CD97P48960 835 aa11.08□□□□□ -0.63
SF3B2-201ENST00000322535 ZNF844Q08AG5 666 aa11.08□□□□□ -0.63
SF3B2-201ENST00000322535 DPYDQ12882 1025 aa11.08□□□□□ -0.63
SF3B2-201ENST00000322535 SPA17Q15506 151 aa11.08□□□□□ -0.63
SF3B2-201ENST00000322535 IFI16Q16666 785 aaKnown RBP11.08□□□□□ -0.63
SF3B2-201ENST00000322535 MUM1Q2TAK8 710 aa11.08□□□□□ -0.63
SF3B2-201ENST00000322535 C6orf183Q5T699 404 aa11.08□□□□□ -0.63
SF3B2-201ENST00000322535 RRAGBQ5VZM2 374 aa11.08□□□□□ -0.63
SF3B2-201ENST00000322535 WDR59Q6PJI9 974 aa11.08□□□□□ -0.63
SF3B2-201ENST00000322535 FANCBQ8NB91 859 aa11.08□□□□□ -0.63
SF3B2-201ENST00000322535 RETREG2Q8NC44 543 aa11.08□□□□□ -0.63
SF3B2-201ENST00000322535 XPO6Q96QU8 1125 aaKnown RBP11.08□□□□□ -0.63
SF3B2-201ENST00000322535 VCXQ9H320 206 aa11.08□□□□□ -0.63
SF3B2-201ENST00000322535 TUT1Q9H6E5 874 aaKnown RBP11.08□□□□□ -0.63
SF3B2-201ENST00000322535 VAT1LQ9HCJ6 419 aa11.08□□□□□ -0.63
SF3B2-201ENST00000322535 SEL1LQ9UBV2 794 aa11.08□□□□□ -0.63
SF3B2-201ENST00000322535 GJA3Q9Y6H8 435 aa11.08□□□□□ -0.63
SF3B2-201ENST00000322535 V9GY48 417 aaPredicted RBP11.08□□□□□ -0.63
SF3B2-201ENST00000322535 MYH15Q9Y2K3 1946 aa11.08□□□□□ -0.64
SF3B2-201ENST00000322535 ANO9A1A5B4 782 aa11.08□□□□□ -0.64
SF3B2-201ENST00000322535 C5orf60A6NFR6 353 aa11.08□□□□□ -0.64
SF3B2-201ENST00000322535 KCNJ18B7U540 433 aa11.08□□□□□ -0.64
SF3B2-201ENST00000322535 PLEKP08567 350 aaPredicted RBP11.08□□□□□ -0.64
SF3B2-201ENST00000322535 IDO1P14902 403 aa11.08□□□□□ -0.64
SF3B2-201ENST00000322535 TCF7P36402 384 aaPredicted RBP11.08□□□□□ -0.64
SF3B2-201ENST00000322535 MTTPP55157 894 aa11.08□□□□□ -0.64
SF3B2-201ENST00000322535 PPP4CP60510 307 aa11.08□□□□□ -0.64
SF3B2-201ENST00000322535 KCNJ12Q14500 433 aa11.08□□□□□ -0.64
SF3B2-201ENST00000322535 NTRK3Q16288 839 aa11.08□□□□□ -0.64
SF3B2-201ENST00000322535 CNPY1Q3B7I2 92 aa11.08□□□□□ -0.64
SF3B2-201ENST00000322535 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.08□□□□□ -0.64
SF3B2-201ENST00000322535 CFAP157Q5JU67 520 aa11.08□□□□□ -0.64
SF3B2-201ENST00000322535 CDKAL1Q5VV42 579 aa11.08□□□□□ -0.64
SF3B2-201ENST00000322535 ZNF365Q70YC5 407 aa11.08□□□□□ -0.64
SF3B2-201ENST00000322535 SIKE1Q9BRV8 207 aa11.08□□□□□ -0.64
SF3B2-201ENST00000322535 VCX3BQ9H321 246 aa11.08□□□□□ -0.64
SF3B2-201ENST00000322535 VCX3AQ9NNX9 186 aa11.08□□□□□ -0.64
SF3B2-201ENST00000322535 MRGBPQ9NV56 204 aa11.08□□□□□ -0.64
SF3B2-201ENST00000322535 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.08□□□□□ -0.64
SF3B2-201ENST00000322535 GOLGA6L10A0A0M3HER8 536 aa11.08□□□□□ -0.64
SF3B2-201ENST00000322535 RARAP10276 462 aa11.08□□□□□ -0.64
SF3B2-201ENST00000322535 RASA1P20936 1047 aa11.08□□□□□ -0.64
SF3B2-201ENST00000322535 IL4RP24394 825 aa11.08□□□□□ -0.64
SF3B2-201ENST00000322535 HOXD10P28358 340 aa11.08□□□□□ -0.64
SF3B2-201ENST00000322535 KLK7P49862 253 aa11.08□□□□□ -0.64
SF3B2-201ENST00000322535 STRIP1Q5VSL9 837 aa11.08□□□□□ -0.64
SF3B2-201ENST00000322535 LRRC47Q8N1G4 583 aaKnown RBP11.08□□□□□ -0.64
SF3B2-201ENST00000322535 SLC16A10Q8TF71 515 aa11.08□□□□□ -0.64
SF3B2-201ENST00000322535 LZICQ8WZA0 190 aa11.08□□□□□ -0.64
SF3B2-201ENST00000322535 LUC7LQ9NQ29 371 aaKnown RBP11.08□□□□□ -0.64
SF3B2-201ENST00000322535 KIAA1522Q9P206 1035 aaPredicted RBP11.08□□□□□ -0.64
SF3B2-201ENST00000322535 HYOU1Q9Y4L1 999 aa11.08□□□□□ -0.64
SF3B2-201ENST00000322535 LRRC42Q9Y546 428 aa11.08□□□□□ -0.64
SF3B2-201ENST00000322535 LTBP1Q14766 1721 aa11.07□□□□□ -0.64
SF3B2-201ENST00000322535 C10orf71Q711Q0 1435 aa11.07□□□□□ -0.64
SF3B2-201ENST00000322535 ADAMTS3O15072 1205 aa11.07□□□□□ -0.64
SF3B2-201ENST00000322535 SART1O43290 800 aaKnown RBP11.07□□□□□ -0.64
SF3B2-201ENST00000322535 TROVE2P10155 538 aaKnown RBP eCLIP11.07□□□□□ -0.64
SF3B2-201ENST00000322535 LIFRP42702 1097 aa11.07□□□□□ -0.64
SF3B2-201ENST00000322535 PRELPP51888 382 aa11.07□□□□□ -0.64
SF3B2-201ENST00000322535 TRIM29Q14134 588 aa11.07□□□□□ -0.64
SF3B2-201ENST00000322535 PPP2R3CQ969Q6 453 aa11.07□□□□□ -0.64
SF3B2-201ENST00000322535 HIC2Q96JB3 615 aa11.07□□□□□ -0.64
SF3B2-201ENST00000322535 GBP5Q96PP8 586 aa11.07□□□□□ -0.64
SF3B2-201ENST00000322535 MAP3K14Q99558 947 aa11.07□□□□□ -0.64
SF3B2-201ENST00000322535 CCDC68Q9H2F9 335 aa11.07□□□□□ -0.64
SF3B2-201ENST00000322535 SYNCQ9H7C4 482 aa11.07□□□□□ -0.64
SF3B2-201ENST00000322535 EXOC1Q9NV70 894 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms