RNA–Protein interactions for RNA: ENST00000308488.10

RSF1-201, Transcript of remodeling and spacing factor 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RSF1, Length 11,550 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RSF1-201ENST00000308488 KDM5CP41229 1560 aa8.33□□□□□ -1.08
RSF1-201ENST00000308488 PALMO75781 387 aa8.33□□□□□ -1.08
RSF1-201ENST00000308488 TTKP33981 857 aa8.33□□□□□ -1.08
RSF1-201ENST00000308488 SKIV2L2P42285 1042 aaKnown RBP8.33□□□□□ -1.08
RSF1-201ENST00000308488 VCPP55072 806 aaKnown RBP8.33□□□□□ -1.08
RSF1-201ENST00000308488 APOA5Q6Q788 366 aa8.33□□□□□ -1.08
RSF1-201ENST00000308488 ESR2Q92731 530 aa8.33□□□□□ -1.08
RSF1-201ENST00000308488 MLPHQ9BV36 600 aaPredicted RBP8.33□□□□□ -1.08
RSF1-201ENST00000308488 AP1M1Q9BXS5 423 aa8.33□□□□□ -1.08
RSF1-201ENST00000308488 DDX56Q9NY93 547 aaKnown RBP8.33□□□□□ -1.08
RSF1-201ENST00000308488 GTF3C4Q9UKN8 822 aa8.33□□□□□ -1.08
RSF1-201ENST00000308488 MAPK8IP1Q9UQF2 711 aa8.33□□□□□ -1.08
RSF1-201ENST00000308488 DMTF1Q9Y222 760 aa8.33□□□□□ -1.08
RSF1-201ENST00000308488 TKTP29401 623 aaKnown RBP8.33□□□□□ -1.08
RSF1-201ENST00000308488 RBM20Q5T481 1227 aaKnown RBP8.33□□□□□ -1.08
RSF1-201ENST00000308488 TWF2Q6IBS0 349 aaKnown RBP8.33□□□□□ -1.08
RSF1-201ENST00000308488 CD302Q8IX05 232 aa8.33□□□□□ -1.08
RSF1-201ENST00000308488 GRIP2Q9C0E4 1043 aa8.33□□□□□ -1.08
RSF1-201ENST00000308488 LSG1Q9H089 658 aaKnown RBP8.33□□□□□ -1.08
RSF1-201ENST00000308488 TRIM45Q9H8W5 580 aaPredicted RBP8.33□□□□□ -1.08
RSF1-201ENST00000308488 FADS3Q9Y5Q0 445 aa8.33□□□□□ -1.08
RSF1-201ENST00000308488 ITSN2Q9NZM3 1697 aa8.33□□□□□ -1.08
RSF1-201ENST00000308488 SERPINB2P05120 415 aa8.33□□□□□ -1.08
RSF1-201ENST00000308488 PLEKHO1Q53GL0 409 aaPredicted RBP8.33□□□□□ -1.08
RSF1-201ENST00000308488 ALKBH8Q96BT7 664 aaKnown RBP8.33□□□□□ -1.08
RSF1-201ENST00000308488 TMEM87BQ96K49 555 aa8.33□□□□□ -1.08
RSF1-201ENST00000308488 WDR12Q9GZL7 423 aaKnown RBP8.33□□□□□ -1.08
RSF1-201ENST00000308488 NCOA5Q9HCD5 579 aaKnown RBP8.33□□□□□ -1.08
RSF1-201ENST00000308488 PRAG1Q86YV5 1406 aa8.33□□□□□ -1.08
RSF1-201ENST00000308488 F6X3S4 739 aa8.33□□□□□ -1.08
RSF1-201ENST00000308488 DEXIO95424 95 aa8.33□□□□□ -1.08
RSF1-201ENST00000308488 TNFRSF8P28908 595 aa8.33□□□□□ -1.08
RSF1-201ENST00000308488 GALNT17Q6IS24 598 aa8.33□□□□□ -1.08
RSF1-201ENST00000308488 ACAD11Q709F0 780 aa8.33□□□□□ -1.08
RSF1-201ENST00000308488 LEMD3Q9Y2U8 911 aa8.33□□□□□ -1.08
RSF1-201ENST00000308488 B2RBV5 119 aa8.33□□□□□ -1.08
RSF1-201ENST00000308488 MTSS1O43312 755 aa8.33□□□□□ -1.08
RSF1-201ENST00000308488 GAS7O60861 476 aa8.33□□□□□ -1.08
RSF1-201ENST00000308488 ARMCX4Q5H9R4 360 aa8.33□□□□□ -1.08
RSF1-201ENST00000308488 FBXO28Q9NVF7 368 aa8.33□□□□□ -1.08
RSF1-201ENST00000308488 TBK1Q9UHD2 729 aa8.33□□□□□ -1.08
RSF1-201ENST00000308488 EME2A4GXA9 379 aaPredicted RBP8.33□□□□□ -1.08
RSF1-201ENST00000308488 POTECB2RU33 542 aa8.33□□□□□ -1.08
RSF1-201ENST00000308488 ZBED1O96006 694 aa8.33□□□□□ -1.08
RSF1-201ENST00000308488 CCT3P49368 545 aaKnown RBP8.33□□□□□ -1.08
RSF1-201ENST00000308488 NAA20P61599 178 aa8.33□□□□□ -1.08
RSF1-201ENST00000308488 ELOA2Q8IYF1 753 aaPredicted RBP8.33□□□□□ -1.08
RSF1-201ENST00000308488 OSCP1Q8WVF1 389 aa8.33□□□□□ -1.08
RSF1-201ENST00000308488 CENPTQ96BT3 561 aa8.33□□□□□ -1.08
RSF1-201ENST00000308488 CLEC4MQ9H2X3 399 aaPredicted RBP8.33□□□□□ -1.08
RSF1-201ENST00000308488 PTPN22Q9Y2R2 807 aa8.33□□□□□ -1.08
RSF1-201ENST00000308488 CHRNA3P32297 505 aa8.32□□□□□ -1.08
RSF1-201ENST00000308488 CYP27A1Q02318 531 aa8.32□□□□□ -1.08
RSF1-201ENST00000308488 RSAD2Q8WXG1 361 aa8.32□□□□□ -1.08
RSF1-201ENST00000308488 TATDN2Q93075 761 aa8.32□□□□□ -1.08
RSF1-201ENST00000308488 TRIM24O15164 1050 aa8.32□□□□□ -1.08
RSF1-201ENST00000308488 VAMP4O75379 141 aa8.32□□□□□ -1.08
RSF1-201ENST00000308488 CIITAP33076 1130 aa8.32□□□□□ -1.08
RSF1-201ENST00000308488 METTL24Q5JXM2 366 aa8.32□□□□□ -1.08
RSF1-201ENST00000308488 SPATA5Q8NB90 893 aa8.32□□□□□ -1.08
RSF1-201ENST00000308488 ATP6V1E2Q96A05 226 aa8.32□□□□□ -1.08
RSF1-201ENST00000308488 ZNF274Q96GC6 653 aaPredicted RBP8.32□□□□□ -1.08
RSF1-201ENST00000308488 VMP1Q96GC9 406 aa8.32□□□□□ -1.08
RSF1-201ENST00000308488 BRIP1Q9BX63 1249 aa8.32□□□□□ -1.08
RSF1-201ENST00000308488 CNNM1Q9NRU3 951 aa8.32□□□□□ -1.08
RSF1-201ENST00000308488 CARMIL3Q8ND23 1372 aa8.32□□□□□ -1.08
RSF1-201ENST00000308488 ZC3H11AO75152 810 aaKnown RBP eCLIP8.32□□□□□ -1.08
RSF1-201ENST00000308488 TJAP1Q5JTD0 557 aa8.32□□□□□ -1.08
RSF1-201ENST00000308488 ADSSL1Q8N142 457 aa8.32□□□□□ -1.08
RSF1-201ENST00000308488 AGTPBP1Q9UPW5 1226 aa8.32□□□□□ -1.08
RSF1-201ENST00000308488 PCDHGC5Q9Y5F6 944 aa8.32□□□□□ -1.08
RSF1-201ENST00000308488 GSTA4O15217 222 aa8.32□□□□□ -1.08
RSF1-201ENST00000308488 KRT36O76013 467 aa8.32□□□□□ -1.08
RSF1-201ENST00000308488 SEMA3DO95025 777 aa8.32□□□□□ -1.08
RSF1-201ENST00000308488 FAM228BP0C875 321 aa8.32□□□□□ -1.08
RSF1-201ENST00000308488 NCF2P19878 526 aaPredicted RBP8.32□□□□□ -1.08
RSF1-201ENST00000308488 NSFP46459 744 aaKnown RBP8.32□□□□□ -1.08
RSF1-201ENST00000308488 OTUD4Q01804 1114 aaKnown RBP8.32□□□□□ -1.08
RSF1-201ENST00000308488 LRRC36Q1X8D7 754 aa8.32□□□□□ -1.08
RSF1-201ENST00000308488 PACS1Q6VY07 963 aa8.32□□□□□ -1.08
RSF1-201ENST00000308488 ANKRD13CQ8N6S4 541 aa8.32□□□□□ -1.08
RSF1-201ENST00000308488 CYGBQ8WWM9 190 aa8.32□□□□□ -1.08
RSF1-201ENST00000308488 ITIH6Q6UXX5 1313 aa8.32□□□□□ -1.08
RSF1-201ENST00000308488 FTCDO95954 541 aa8.32□□□□□ -1.08
RSF1-201ENST00000308488 YWHAGP61981 247 aaKnown RBP eCLIP8.32□□□□□ -1.08
RSF1-201ENST00000308488 RNF207Q6ZRF8 634 aa8.32□□□□□ -1.08
RSF1-201ENST00000308488 CHID1Q9BWS9 393 aa8.32□□□□□ -1.08
RSF1-201ENST00000308488 AS3MTQ9HBK9 375 aa8.32□□□□□ -1.08
RSF1-201ENST00000308488 A6NJR5 290 aa8.32□□□□□ -1.08
RSF1-201ENST00000308488 SPDYE16A6NNV3 312 aaPredicted RBP8.32□□□□□ -1.08
RSF1-201ENST00000308488 PRR23D1E9PI22 279 aaPredicted RBP8.32□□□□□ -1.08
RSF1-201ENST00000308488 GGPS1O95749 300 aa8.32□□□□□ -1.08
RSF1-201ENST00000308488 ENO1P06733 434 aaKnown RBP8.32□□□□□ -1.08
RSF1-201ENST00000308488 PRR23D2P0DMB1 279 aaPredicted RBP8.32□□□□□ -1.08
RSF1-201ENST00000308488 KLHL38Q2WGJ6 581 aa8.32□□□□□ -1.08
RSF1-201ENST00000308488 KLC2Q9H0B6 622 aa8.32□□□□□ -1.08
RSF1-201ENST00000308488 EXOC7Q9UPT5 735 aa8.32□□□□□ -1.08
RSF1-201ENST00000308488 RNF113AO15541 343 aaKnown RBP8.32□□□□□ -1.08
RSF1-201ENST00000308488 IDO1P14902 403 aa8.32□□□□□ -1.08
RSF1-201ENST00000308488 RALGDSQ12967 914 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms