RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 ARHGEF4Q9NR80 690 aa5.91□□□□□ -1.46
VPS50-202ENST00000305866 SEL1LQ9UBV2 794 aa5.91□□□□□ -1.46
VPS50-202ENST00000305866 LGALS13Q9UHV8 139 aa5.91□□□□□ -1.46
VPS50-202ENST00000305866 FOXO6A8MYZ6 492 aa5.91□□□□□ -1.46
VPS50-202ENST00000305866 CCDC188H7C350 402 aa5.91□□□□□ -1.46
VPS50-202ENST00000305866 RIPK2O43353 540 aa5.91□□□□□ -1.46
VPS50-202ENST00000305866 CHN1P15882 459 aa5.91□□□□□ -1.46
VPS50-202ENST00000305866 NPR1P16066 1061 aa5.91□□□□□ -1.46
VPS50-202ENST00000305866 POLR2FP61218 127 aaKnown RBP5.91□□□□□ -1.46
VPS50-202ENST00000305866 KLF1Q13351 362 aaPredicted RBP5.91□□□□□ -1.46
VPS50-202ENST00000305866 NEDD9Q14511 834 aa5.91□□□□□ -1.46
VPS50-202ENST00000305866 CFAP58Q5T655 872 aa5.91□□□□□ -1.46
VPS50-202ENST00000305866 CDC42EP5Q6NZY7 148 aa5.91□□□□□ -1.46
VPS50-202ENST00000305866 MYOCDQ8IZQ8 938 aa5.91□□□□□ -1.46
VPS50-202ENST00000305866 SPICE1Q8N0Z3 855 aa5.91□□□□□ -1.46
VPS50-202ENST00000305866 HVCN1Q96D96 273 aa5.91□□□□□ -1.46
VPS50-202ENST00000305866 PCDHB18PQ96TA0 734 aa5.91□□□□□ -1.46
VPS50-202ENST00000305866 PSMD1Q99460 953 aa5.91□□□□□ -1.46
VPS50-202ENST00000305866 MAP3K20Q9NYL2 800 aaKnown RBP5.91□□□□□ -1.46
VPS50-202ENST00000305866 SEC63Q9UGP8 760 aaKnown RBP5.91□□□□□ -1.46
VPS50-202ENST00000305866 COL4A5P29400 1685 aa5.91□□□□□ -1.46
VPS50-202ENST00000305866 MYLKQ15746 1914 aa5.91□□□□□ -1.46
VPS50-202ENST00000305866 E9PMD0 336 aa5.91□□□□□ -1.46
VPS50-202ENST00000305866 SMAPO00193 183 aa5.91□□□□□ -1.46
VPS50-202ENST00000305866 P4HA2O15460 535 aa5.91□□□□□ -1.46
VPS50-202ENST00000305866 SERPINB2P05120 415 aa5.91□□□□□ -1.46
VPS50-202ENST00000305866 FOXN2P32314 431 aa5.91□□□□□ -1.46
VPS50-202ENST00000305866 ASIC1P78348 528 aa5.91□□□□□ -1.46
VPS50-202ENST00000305866 CBWD6Q4V339 395 aa5.91□□□□□ -1.46
VPS50-202ENST00000305866 CBWD3Q5JTY5 395 aa5.91□□□□□ -1.46
VPS50-202ENST00000305866 CBWD5Q5RIA9 395 aa5.91□□□□□ -1.46
VPS50-202ENST00000305866 STRIP1Q5VSL9 837 aa5.91□□□□□ -1.46
VPS50-202ENST00000305866 SMIM5Q71RC9 77 aa5.91□□□□□ -1.46
VPS50-202ENST00000305866 PODNQ7Z5L7 613 aa5.91□□□□□ -1.46
VPS50-202ENST00000305866 KRT35Q92764 455 aa5.91□□□□□ -1.46
VPS50-202ENST00000305866 CHMP6Q96FZ7 201 aa5.91□□□□□ -1.46
VPS50-202ENST00000305866 ERP44Q9BS26 406 aa5.91□□□□□ -1.46
VPS50-202ENST00000305866 RANBP17Q9H2T7 1088 aaKnown RBP5.91□□□□□ -1.46
VPS50-202ENST00000305866 SEMA4AQ9H3S1 761 aa5.91□□□□□ -1.46
VPS50-202ENST00000305866 DDX25Q9UHL0 483 aaKnown RBP5.91□□□□□ -1.46
VPS50-202ENST00000305866 SERPINB13Q9UIV8 391 aa5.91□□□□□ -1.46
VPS50-202ENST00000305866 SPDYE2BA6NHP3 402 aa5.9□□□□□ -1.46
VPS50-202ENST00000305866 PEX11AO75192 247 aa5.9□□□□□ -1.46
VPS50-202ENST00000305866 PSMD10O75832 226 aa5.9□□□□□ -1.46
VPS50-202ENST00000305866 TMEM253P0C7T8 217 aa5.9□□□□□ -1.46
VPS50-202ENST00000305866 SPDYE6P0CI01 402 aa5.9□□□□□ -1.46
VPS50-202ENST00000305866 GAP43P17677 238 aa5.9□□□□□ -1.46
VPS50-202ENST00000305866 COPB2P35606 906 aa5.9□□□□□ -1.46
VPS50-202ENST00000305866 ALDH5A1P51649 535 aaPredicted RBP5.9□□□□□ -1.46
VPS50-202ENST00000305866 BLMHQ13867 455 aa5.9□□□□□ -1.46
VPS50-202ENST00000305866 RASA3Q14644 834 aa5.9□□□□□ -1.46
VPS50-202ENST00000305866 CLUL1Q15846 466 aa5.9□□□□□ -1.46
VPS50-202ENST00000305866 FAM98CQ17RN3 349 aaKnown RBP5.9□□□□□ -1.46
VPS50-202ENST00000305866 SHROOM1Q2M3G4 852 aaPredicted RBP5.9□□□□□ -1.46
VPS50-202ENST00000305866 SPDYE2Q495Y8 402 aa5.9□□□□□ -1.46
VPS50-202ENST00000305866 DACT2Q5SW24 774 aa5.9□□□□□ -1.46
VPS50-202ENST00000305866 PHLDB3Q6NSJ2 640 aa5.9□□□□□ -1.46
VPS50-202ENST00000305866 C11orf63Q6NUN7 778 aa5.9□□□□□ -1.46
VPS50-202ENST00000305866 CATSPER3Q86XQ3 398 aa5.9□□□□□ -1.46
VPS50-202ENST00000305866 DAW1Q8N136 415 aa5.9□□□□□ -1.46
VPS50-202ENST00000305866 MAML1Q92585 1016 aa5.9□□□□□ -1.46
VPS50-202ENST00000305866 CARD9Q9H257 536 aa5.9□□□□□ -1.46
VPS50-202ENST00000305866 GINM1Q9NU53 330 aa5.9□□□□□ -1.46
VPS50-202ENST00000305866 FAM198AQ9UFP1 575 aa5.9□□□□□ -1.46
VPS50-202ENST00000305866 ZMYND8Q9ULU4 1186 aaPredicted RBP5.9□□□□□ -1.46
VPS50-202ENST00000305866 RABGAP1Q9Y3P9 1069 aa5.9□□□□□ -1.46
VPS50-202ENST00000305866 PLXNA1Q9UIW2 1896 aa5.9□□□□□ -1.46
VPS50-202ENST00000305866 E7EVH7 732 aa5.9□□□□□ -1.47
VPS50-202ENST00000305866 PPEF1O14829 653 aaPredicted RBP5.9□□□□□ -1.47
VPS50-202ENST00000305866 USO1O60763 962 aaKnown RBP5.9□□□□□ -1.47
VPS50-202ENST00000305866 EYA4O95677 639 aa5.9□□□□□ -1.47
VPS50-202ENST00000305866 MTIF2P46199 727 aaKnown RBP5.9□□□□□ -1.47
VPS50-202ENST00000305866 GALCP54803 685 aa5.9□□□□□ -1.47
VPS50-202ENST00000305866 JAG1P78504 1218 aa5.9□□□□□ -1.47
VPS50-202ENST00000305866 LMNB2Q03252 620 aa5.9□□□□□ -1.47
VPS50-202ENST00000305866 KIAA0753Q2KHM9 967 aa5.9□□□□□ -1.47
VPS50-202ENST00000305866 CLEC16AQ2KHT3 1053 aa5.9□□□□□ -1.47
VPS50-202ENST00000305866 OR52E8Q6IFG1 317 aa5.9□□□□□ -1.47
VPS50-202ENST00000305866 C1orf186Q6ZWK4 172 aa5.9□□□□□ -1.47
VPS50-202ENST00000305866 ARMC9Q7Z3E5 817 aa5.9□□□□□ -1.47
VPS50-202ENST00000305866 MAPKAPK5Q8IW41 473 aa5.9□□□□□ -1.47
VPS50-202ENST00000305866 FBXO25Q8TCJ0 367 aa5.9□□□□□ -1.47
VPS50-202ENST00000305866 HOOK2Q96ED9 719 aa5.9□□□□□ -1.47
VPS50-202ENST00000305866 METTL14Q9HCE5 456 aaKnown RBP5.9□□□□□ -1.47
VPS50-202ENST00000305866 PNMA3Q9UL41 463 aa5.9□□□□□ -1.47
VPS50-202ENST00000305866 NOVA2Q9UNW9 492 aaKnown RBP5.9□□□□□ -1.47
VPS50-202ENST00000305866 ADGRA3Q8IWK6 1321 aa5.9□□□□□ -1.47
VPS50-202ENST00000305866 A0A0G2JS52 829 aa5.89□□□□□ -1.47
VPS50-202ENST00000305866 SHTN1A0MZ66 631 aa5.89□□□□□ -1.47
VPS50-202ENST00000305866 PGRMC1O00264 195 aaKnown RBP5.89□□□□□ -1.47
VPS50-202ENST00000305866 GH1P01241 217 aa5.89□□□□□ -1.47
VPS50-202ENST00000305866 MATR3P43243 847 aaKnown RBP eCLIP5.89□□□□□ -1.47
VPS50-202ENST00000305866 TRAF1Q13077 416 aa5.89□□□□□ -1.47
VPS50-202ENST00000305866 PPP2R5AQ15172 486 aa5.89□□□□□ -1.47
VPS50-202ENST00000305866 SLC9C1Q4G0N8 1177 aa5.89□□□□□ -1.47
VPS50-202ENST00000305866 EPC2Q52LR7 807 aa5.89□□□□□ -1.47
VPS50-202ENST00000305866 SPDYAQ5MJ70 313 aa5.89□□□□□ -1.47
VPS50-202ENST00000305866 MFSD14BQ5SR56 506 aa5.89□□□□□ -1.47
VPS50-202ENST00000305866 CES4AQ5XG92 561 aa5.89□□□□□ -1.47
VPS50-202ENST00000305866 KRT79Q5XKE5 535 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms