RNA–Protein interactions for RNA: ENST00000296129.5

CDCP1-201, Transcript of CUB domain containing protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDCP1, Length 6,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-201ENST00000296129 SOX5P35711 763 aa18.42■□□□□ 0.54
CDCP1-201ENST00000296129 SNCBQ16143 134 aa18.42■□□□□ 0.54
CDCP1-201ENST00000296129 BZW1Q7L1Q6 419 aaKnown RBP18.42■□□□□ 0.54
CDCP1-201ENST00000296129 NYAP2Q9P242 653 aa18.42■□□□□ 0.54
CDCP1-201ENST00000296129 ZBTB12Q9Y330 459 aaPredicted RBP18.42■□□□□ 0.54
CDCP1-201ENST00000296129 KDM6AO15550 1401 aaPredicted RBP18.42■□□□□ 0.54
CDCP1-201ENST00000296129 RNF25Q96BH1 459 aaPredicted RBP18.42■□□□□ 0.54
CDCP1-201ENST00000296129 AGO2Q9UKV8 859 aaKnown RBP18.42■□□□□ 0.54
CDCP1-201ENST00000296129 CNTNAP4Q9C0A0 1308 aa18.42■□□□□ 0.54
CDCP1-201ENST00000296129 IQANK1A0A1B0GTG1 560 aa18.42■□□□□ 0.54
CDCP1-201ENST00000296129 ESYT2A0FGR8 921 aa18.42■□□□□ 0.54
CDCP1-201ENST00000296129 SATB1Q01826 763 aa18.42■□□□□ 0.54
CDCP1-201ENST00000296129 ATP6V1E2Q96A05 226 aa18.42■□□□□ 0.54
CDCP1-201ENST00000296129 KLC2Q9H0B6 622 aa18.42■□□□□ 0.54
CDCP1-201ENST00000296129 RIMBP3CA6NJZ7 1639 aa18.42■□□□□ 0.54
CDCP1-201ENST00000296129 RIMBP3BA6NNM3 1639 aa18.42■□□□□ 0.54
CDCP1-201ENST00000296129 RIMBP3Q9UFD9 1639 aa18.42■□□□□ 0.54
CDCP1-201ENST00000296129 CNTNAP5Q8WYK1 1306 aa18.42■□□□□ 0.54
CDCP1-201ENST00000296129 CTDNEP1O95476 244 aa18.42■□□□□ 0.54
CDCP1-201ENST00000296129 SPOPLQ6IQ16 392 aa18.42■□□□□ 0.54
CDCP1-201ENST00000296129 MYLK4Q86YV6 388 aaPredicted RBP18.42■□□□□ 0.54
CDCP1-201ENST00000296129 GLYCTKQ8IVS8 523 aa18.42■□□□□ 0.54
CDCP1-201ENST00000296129 LIMA1Q9UHB6 759 aaKnown RBP18.42■□□□□ 0.54
CDCP1-201ENST00000296129 FDPSP14324 419 aaKnown RBP18.41■□□□□ 0.54
CDCP1-201ENST00000296129 MTF1Q14872 753 aa18.41■□□□□ 0.54
CDCP1-201ENST00000296129 TECPR2O15040 1411 aa18.41■□□□□ 0.54
CDCP1-201ENST00000296129 PDLIM2Q96JY6 352 aa18.41■□□□□ 0.54
CDCP1-201ENST00000296129 PRKAG2Q9UGJ0 569 aa18.41■□□□□ 0.54
CDCP1-201ENST00000296129 PDXKO00764 312 aa18.41■□□□□ 0.54
CDCP1-201ENST00000296129 ENTPD3O75355 529 aa18.41■□□□□ 0.54
CDCP1-201ENST00000296129 LCMT1Q9UIC8 334 aa18.41■□□□□ 0.54
CDCP1-201ENST00000296129 CNOT7Q9UIV1 285 aaKnown RBP18.41■□□□□ 0.54
CDCP1-201ENST00000296129 WDR46O15213 610 aaKnown RBP18.41■□□□□ 0.54
CDCP1-201ENST00000296129 STX1BP61266 288 aa18.41■□□□□ 0.54
CDCP1-201ENST00000296129 LMBRD2Q68DH5 695 aaPredicted RBP18.41■□□□□ 0.54
CDCP1-201ENST00000296129 RSBN1LQ6PCB5 846 aaPredicted RBP18.41■□□□□ 0.54
CDCP1-201ENST00000296129 UBN1Q9NPG3 1134 aa18.41■□□□□ 0.54
CDCP1-201ENST00000296129 FAM217BQ9NTX9 383 aaPredicted RBP18.41■□□□□ 0.54
CDCP1-201ENST00000296129 KLRK1P26718 216 aa18.4■□□□□ 0.54
CDCP1-201ENST00000296129 CASP2P42575 452 aa18.4■□□□□ 0.54
CDCP1-201ENST00000296129 LRGUKQ96M69 825 aa18.4■□□□□ 0.54
CDCP1-201ENST00000296129 C7orf25Q9BPX7 421 aa18.4■□□□□ 0.54
CDCP1-201ENST00000296129 HEY1Q9Y5J3 304 aa18.4■□□□□ 0.54
CDCP1-201ENST00000296129 RRP15Q9Y3B9 282 aaKnown RBP18.4■□□□□ 0.54
CDCP1-201ENST00000296129 GOLGA8MH3BSY2 632 aa18.4■□□□□ 0.54
CDCP1-201ENST00000296129 EXOC4Q96A65 974 aa18.4■□□□□ 0.54
CDCP1-201ENST00000296129 REEP2Q9BRK0 252 aa18.4■□□□□ 0.54
CDCP1-201ENST00000296129 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.4■□□□□ 0.54
CDCP1-201ENST00000296129 ATP1A1P05023 1023 aaKnown RBP18.4■□□□□ 0.54
CDCP1-201ENST00000296129 KPNA2P52292 529 aaKnown RBP18.4■□□□□ 0.54
CDCP1-201ENST00000296129 ARL4CP56559 192 aa18.4■□□□□ 0.54
CDCP1-201ENST00000296129 PSMC1P62191 440 aaKnown RBP18.4■□□□□ 0.54
CDCP1-201ENST00000296129 SCYL3Q8IZE3 742 aa18.4■□□□□ 0.54
CDCP1-201ENST00000296129 NUDCD1Q96RS6 583 aa18.4■□□□□ 0.54
CDCP1-201ENST00000296129 PCSK1NQ9UHG2 260 aa18.4■□□□□ 0.54
CDCP1-201ENST00000296129 CA4P22748 312 aa18.4■□□□□ 0.54
CDCP1-201ENST00000296129 GYS2P54840 703 aa18.4■□□□□ 0.54
CDCP1-201ENST00000296129 ADSSL1Q8N142 457 aa18.4■□□□□ 0.54
CDCP1-201ENST00000296129 MIPOL1Q8TD10 442 aa18.4■□□□□ 0.54
CDCP1-201ENST00000296129 SH2D3AQ9BRG2 576 aa18.4■□□□□ 0.54
CDCP1-201ENST00000296129 IP6K2Q9UHH9 426 aa18.4■□□□□ 0.54
CDCP1-201ENST00000296129 PRR12Q9ULL5 1215 aa18.4■□□□□ 0.54
CDCP1-201ENST00000296129 PSMD14O00487 310 aa18.39■□□□□ 0.54
CDCP1-201ENST00000296129 SLC16A3O15427 465 aaKnown RBP18.39■□□□□ 0.54
CDCP1-201ENST00000296129 EVI5O60447 810 aa18.39■□□□□ 0.54
CDCP1-201ENST00000296129 SLC8A1P32418 973 aa18.39■□□□□ 0.54
CDCP1-201ENST00000296129 GOLGA8QA0A0J9YX86 632 aa18.39■□□□□ 0.53
CDCP1-201ENST00000296129 GRID2IPA4D2P6 1211 aa18.39■□□□□ 0.53
CDCP1-201ENST00000296129 GOLGA8OA6NCC3 632 aa18.39■□□□□ 0.53
CDCP1-201ENST00000296129 GOLGA8NF8WBI6 632 aa18.39■□□□□ 0.53
CDCP1-201ENST00000296129 MYBL1P10243 752 aa18.39■□□□□ 0.53
CDCP1-201ENST00000296129 ELF1P32519 619 aa18.39■□□□□ 0.53
CDCP1-201ENST00000296129 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.39■□□□□ 0.53
CDCP1-201ENST00000296129 CIITAP33076 1130 aa18.39■□□□□ 0.53
CDCP1-201ENST00000296129 EPHB1P54762 984 aa18.39■□□□□ 0.53
CDCP1-201ENST00000296129 IQCB1Q15051 598 aa18.39■□□□□ 0.53
CDCP1-201ENST00000296129 CC2D1AQ6P1N0 951 aaPredicted RBP18.39■□□□□ 0.53
CDCP1-201ENST00000296129 EFCAB13Q8IY85 973 aa18.39■□□□□ 0.53
CDCP1-201ENST00000296129 TTC13Q8NBP0 860 aa18.39■□□□□ 0.53
CDCP1-201ENST00000296129 FBXL13Q8NEE6 735 aa18.39■□□□□ 0.53
CDCP1-201ENST00000296129 COG2Q14746 738 aa18.39■□□□□ 0.53
CDCP1-201ENST00000296129 GCOM2Q9BZD3 368 aaPredicted RBP18.39■□□□□ 0.53
CDCP1-201ENST00000296129 A0A1B0GTH6 734 aa18.39■□□□□ 0.53
CDCP1-201ENST00000296129 BAATQ14032 418 aaPredicted RBP18.39■□□□□ 0.53
CDCP1-201ENST00000296129 INTS5Q6P9B9 1019 aaKnown RBP18.39■□□□□ 0.53
CDCP1-201ENST00000296129 ADORA2BP29275 332 aa18.38■□□□□ 0.53
CDCP1-201ENST00000296129 FASTKD5Q7L8L6 764 aaKnown RBP18.38■□□□□ 0.53
CDCP1-201ENST00000296129 SCN4BQ8IWT1 228 aa18.38■□□□□ 0.53
CDCP1-201ENST00000296129 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.38■□□□□ 0.53
CDCP1-201ENST00000296129 HPS5Q9UPZ3 1129 aa18.38■□□□□ 0.53
CDCP1-201ENST00000296129 ASB14A6NK59 587 aa18.38■□□□□ 0.53
CDCP1-201ENST00000296129 COPB2P35606 906 aa18.38■□□□□ 0.53
CDCP1-201ENST00000296129 TFDP2Q14188 446 aa18.38■□□□□ 0.53
CDCP1-201ENST00000296129 CEP120Q8N960 986 aa18.38■□□□□ 0.53
CDCP1-201ENST00000296129 DDX47Q9H0S4 455 aaKnown RBP18.38■□□□□ 0.53
CDCP1-201ENST00000296129 HSPBP1Q9NZL4 362 aa18.38■□□□□ 0.53
CDCP1-201ENST00000296129 KLHL8Q9P2G9 620 aaPredicted RBP18.38■□□□□ 0.53
CDCP1-201ENST00000296129 TTC7AQ9ULT0 858 aaPredicted RBP18.38■□□□□ 0.53
CDCP1-201ENST00000296129 NOC2LQ9Y3T9 749 aaKnown RBP18.38■□□□□ 0.53
CDCP1-201ENST00000296129 ESYT3A0FGR9 886 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms