RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 PHF2O75151 1096 aa16.13■□□□□ 0.17
XRCC1-201ENST00000262887 AKAP3O75969 853 aa16.13■□□□□ 0.17
XRCC1-201ENST00000262887 CCNB1P14635 433 aa16.13■□□□□ 0.17
XRCC1-201ENST00000262887 LMNB1P20700 586 aa16.13■□□□□ 0.17
XRCC1-201ENST00000262887 KNOP1Q1ED39 458 aaKnown RBP16.13■□□□□ 0.17
XRCC1-201ENST00000262887 MAPKAPK5Q8IW41 473 aa16.13■□□□□ 0.17
XRCC1-201ENST00000262887 ALG3Q92685 438 aa16.13■□□□□ 0.17
XRCC1-201ENST00000262887 ROPN1BQ9BZX4 212 aaPredicted RBP16.13■□□□□ 0.17
XRCC1-201ENST00000262887 RIOX1Q9H6W3 641 aa16.13■□□□□ 0.17
XRCC1-201ENST00000262887 ROPN1Q9HAT0 212 aaPredicted RBP16.13■□□□□ 0.17
XRCC1-201ENST00000262887 PRKAG3Q9UGI9 489 aa16.13■□□□□ 0.17
XRCC1-201ENST00000262887 PODXLO00592 558 aa16.13■□□□□ 0.17
XRCC1-201ENST00000262887 RARGP13631 454 aa16.13■□□□□ 0.17
XRCC1-201ENST00000262887 PLCG2P16885 1265 aa16.13■□□□□ 0.17
XRCC1-201ENST00000262887 CHRNA3P32297 505 aa16.13■□□□□ 0.17
XRCC1-201ENST00000262887 SKIV2L2P42285 1042 aaKnown RBP16.13■□□□□ 0.17
XRCC1-201ENST00000262887 MAEAQ7L5Y9 396 aa16.13■□□□□ 0.17
XRCC1-201ENST00000262887 SLC30A5Q8TAD4 765 aa16.13■□□□□ 0.17
XRCC1-201ENST00000262887 MAST2Q6P0Q8 1798 aa16.12■□□□□ 0.17
XRCC1-201ENST00000262887 CALUO43852 315 aaPredicted RBP16.12■□□□□ 0.17
XRCC1-201ENST00000262887 VCAM1P19320 739 aa16.12■□□□□ 0.17
XRCC1-201ENST00000262887 SF3B3Q15393 1217 aaKnown RBP16.12■□□□□ 0.17
XRCC1-201ENST00000262887 AADACL2Q6P093 401 aa16.12■□□□□ 0.17
XRCC1-201ENST00000262887 FBF1Q8TES7 1133 aa16.12■□□□□ 0.17
XRCC1-201ENST00000262887 ARHGEF2Q92974 986 aaKnown RBP16.12■□□□□ 0.17
XRCC1-201ENST00000262887 CEP95Q96GE4 821 aa16.12■□□□□ 0.17
XRCC1-201ENST00000262887 RMDN2Q96LZ7 410 aa16.12■□□□□ 0.17
XRCC1-201ENST00000262887 NLRP3Q96P20 1036 aa16.12■□□□□ 0.17
XRCC1-201ENST00000262887 TSC22D3Q99576 134 aa16.12■□□□□ 0.17
XRCC1-201ENST00000262887 RTCBQ9Y3I0 505 aaKnown RBP16.12■□□□□ 0.17
XRCC1-201ENST00000262887 LRRC42Q9Y546 428 aa16.12■□□□□ 0.17
XRCC1-201ENST00000262887 DPPA5A6NC42 116 aa16.12■□□□□ 0.17
XRCC1-201ENST00000262887 HGSO14964 777 aaPredicted RBP16.12■□□□□ 0.17
XRCC1-201ENST00000262887 GNAZP19086 355 aa16.12■□□□□ 0.17
XRCC1-201ENST00000262887 CCDC25Q86WR0 208 aa16.12■□□□□ 0.17
XRCC1-201ENST00000262887 SLC35C1Q96A29 364 aa16.12■□□□□ 0.17
XRCC1-201ENST00000262887 ARHGEF26Q96DR7 871 aa16.12■□□□□ 0.17
XRCC1-201ENST00000262887 RUNDC3BQ96NL0 473 aa16.12■□□□□ 0.17
XRCC1-201ENST00000262887 TAOK3Q9H2K8 898 aa16.12■□□□□ 0.17
XRCC1-201ENST00000262887 ETNK1Q9HBU6 452 aa16.12■□□□□ 0.17
XRCC1-201ENST00000262887 METTL14Q9HCE5 456 aaKnown RBP16.12■□□□□ 0.17
XRCC1-201ENST00000262887 KLHL14Q9P2G3 628 aa16.12■□□□□ 0.17
XRCC1-201ENST00000262887 NKX1-2Q9UD57 310 aaPredicted RBP16.12■□□□□ 0.17
XRCC1-201ENST00000262887 SYNGAP1Q96PV0 1343 aa16.12■□□□□ 0.17
XRCC1-201ENST00000262887 BAG3O95817 575 aa16.11■□□□□ 0.17
XRCC1-201ENST00000262887 LDHBP07195 334 aaKnown RBP16.11■□□□□ 0.17
XRCC1-201ENST00000262887 CDK8P49336 464 aa16.11■□□□□ 0.17
XRCC1-201ENST00000262887 LONRF1Q17RB8 773 aa16.11■□□□□ 0.17
XRCC1-201ENST00000262887 ARSHQ5FYA8 562 aa16.11■□□□□ 0.17
XRCC1-201ENST00000262887 LMNTD2Q8IXW0 634 aa16.11■□□□□ 0.17
XRCC1-201ENST00000262887 ANKRD42Q8N9B4 389 aa16.11■□□□□ 0.17
XRCC1-201ENST00000262887 KLHL23Q8NBE8 558 aa16.11■□□□□ 0.17
XRCC1-201ENST00000262887 NEDD1Q8NHV4 660 aa16.11■□□□□ 0.17
XRCC1-201ENST00000262887 SNED1Q8TER0 1413 aa16.11■□□□□ 0.17
XRCC1-201ENST00000262887 CKAP2Q8WWK9 683 aa16.11■□□□□ 0.17
XRCC1-201ENST00000262887 MLXIPLQ9NP71 852 aa16.11■□□□□ 0.17
XRCC1-201ENST00000262887 SEPT11Q9NVA2 429 aaKnown RBP16.11■□□□□ 0.17
XRCC1-201ENST00000262887 PITPNM2Q9BZ72 1349 aa16.11■□□□□ 0.17
XRCC1-201ENST00000262887 LRRD1A4D1F6 860 aa16.11■□□□□ 0.17
XRCC1-201ENST00000262887 SMIM24O75264 130 aa16.11■□□□□ 0.17
XRCC1-201ENST00000262887 UPP2O95045 317 aa16.11■□□□□ 0.17
XRCC1-201ENST00000262887 UNC5CO95185 931 aa16.11■□□□□ 0.17
XRCC1-201ENST00000262887 SOX5P35711 763 aa16.11■□□□□ 0.17
XRCC1-201ENST00000262887 PAPOLAP51003 745 aaKnown RBP16.11■□□□□ 0.17
XRCC1-201ENST00000262887 ANO7Q6IWH7 933 aa16.11■□□□□ 0.17
XRCC1-201ENST00000262887 RPUSD2Q8IZ73 545 aaKnown RBP16.11■□□□□ 0.17
XRCC1-201ENST00000262887 PRELID2Q8N945 189 aa16.11■□□□□ 0.17
XRCC1-201ENST00000262887 THAP2Q9H0W7 228 aa16.11■□□□□ 0.17
XRCC1-201ENST00000262887 KCNK9Q9NPC2 374 aa16.11■□□□□ 0.17
XRCC1-201ENST00000262887 HSPA6P17066 643 aa16.1■□□□□ 0.17
XRCC1-201ENST00000262887 CASP4P49662 377 aa16.1■□□□□ 0.17
XRCC1-201ENST00000262887 RNF43Q68DV7 783 aa16.1■□□□□ 0.17
XRCC1-201ENST00000262887 CCDC137Q6PK04 289 aaKnown RBP16.1■□□□□ 0.17
XRCC1-201ENST00000262887 VSTM1Q6UX27 236 aa16.1■□□□□ 0.17
XRCC1-201ENST00000262887 GDAP1Q8TB36 358 aa16.1■□□□□ 0.17
XRCC1-201ENST00000262887 RNPEPL1Q9HAU8 725 aa16.1■□□□□ 0.17
XRCC1-201ENST00000262887 PAPOLBQ9NRJ5 636 aaKnown RBP16.1■□□□□ 0.17
XRCC1-201ENST00000262887 PCYOX1Q9UHG3 505 aa16.1■□□□□ 0.17
XRCC1-201ENST00000262887 E7ENQ6 273 aa16.1■□□□□ 0.17
XRCC1-201ENST00000262887 PDXKO00764 312 aa16.1■□□□□ 0.17
XRCC1-201ENST00000262887 NR3C1P04150 777 aa16.1■□□□□ 0.17
XRCC1-201ENST00000262887 CREB1P16220 341 aa16.1■□□□□ 0.17
XRCC1-201ENST00000262887 CALB2P22676 271 aa16.1■□□□□ 0.17
XRCC1-201ENST00000262887 PCK1P35558 622 aa16.1■□□□□ 0.17
XRCC1-201ENST00000262887 MRPS35P82673 323 aaKnown RBP16.1■□□□□ 0.17
XRCC1-201ENST00000262887 MKRN3Q13064 507 aaKnown RBP16.1■□□□□ 0.17
XRCC1-201ENST00000262887 GNPTABQ3T906 1256 aa16.1■□□□□ 0.17
XRCC1-201ENST00000262887 TTC27Q6P3X3 843 aa16.1■□□□□ 0.17
XRCC1-201ENST00000262887 SFR1Q86XK3 245 aa16.1■□□□□ 0.17
XRCC1-201ENST00000262887 OLIG1Q8TAK6 271 aa16.1■□□□□ 0.17
XRCC1-201ENST00000262887 UTP4Q969X6 686 aaKnown RBP16.1■□□□□ 0.17
XRCC1-201ENST00000262887 DHX36Q9H2U1 1008 aaKnown RBP16.1■□□□□ 0.17
XRCC1-201ENST00000262887 TXLNGQ9NUQ3 528 aa16.1■□□□□ 0.17
XRCC1-201ENST00000262887 ANKIB1Q9P2G1 1089 aa16.1■□□□□ 0.17
XRCC1-201ENST00000262887 ZNF652Q9Y2D9 606 aa16.1■□□□□ 0.17
XRCC1-201ENST00000262887 PCDHB13Q9Y5F0 798 aa16.1■□□□□ 0.17
XRCC1-201ENST00000262887 POTEFA5A3E0 1075 aa16.09■□□□□ 0.17
XRCC1-201ENST00000262887 RTN3O95197 1032 aaPredicted RBP16.09■□□□□ 0.17
XRCC1-201ENST00000262887 POTEIP0CG38 1075 aa16.09■□□□□ 0.17
XRCC1-201ENST00000262887 RPL13P26373 211 aaKnown RBP16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms