RNA–Protein interactions for RNA: ENST00000260777.14

SHTN1-201, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHTN1, Length 5,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-201ENST00000260777 CSF1RP07333 972 aa16.93■□□□□ 0.3
SHTN1-201ENST00000260777 MDM2Q00987 491 aaPredicted RBP16.93■□□□□ 0.3
SHTN1-201ENST00000260777 RHOT1Q8IXI2 618 aa16.93■□□□□ 0.3
SHTN1-201ENST00000260777 ST13P4Q8IZP2 240 aaPredicted RBP16.93■□□□□ 0.3
SHTN1-201ENST00000260777 RNPC3Q96LT9 517 aaKnown RBP16.93■□□□□ 0.3
SHTN1-201ENST00000260777 LRRC37BQ96QE4 947 aa16.93■□□□□ 0.3
SHTN1-201ENST00000260777 EPN3Q9H201 632 aa16.93■□□□□ 0.3
SHTN1-201ENST00000260777 CACYBPQ9HB71 228 aaKnown RBP16.93■□□□□ 0.3
SHTN1-201ENST00000260777 PSD3Q9NYI0 1048 aa16.93■□□□□ 0.3
SHTN1-201ENST00000260777 STOML1Q9UBI4 398 aa16.93■□□□□ 0.3
SHTN1-201ENST00000260777 PPARGC1AQ9UBK2 798 aaKnown RBP16.93■□□□□ 0.3
SHTN1-201ENST00000260777 RAD17O75943 681 aa16.93■□□□□ 0.3
SHTN1-201ENST00000260777 SRGAP2CP0DJJ0 459 aa16.93■□□□□ 0.3
SHTN1-201ENST00000260777 MDH1P40925 334 aaKnown RBP16.93■□□□□ 0.3
SHTN1-201ENST00000260777 FAM167AQ96KS9 214 aa16.93■□□□□ 0.3
SHTN1-201ENST00000260777 TSPYL2Q9H2G4 693 aaPredicted RBP16.93■□□□□ 0.3
SHTN1-201ENST00000260777 CLDN3O15551 220 aa16.92■□□□□ 0.3
SHTN1-201ENST00000260777 RSRC2Q7L4I2 434 aaKnown RBP16.92■□□□□ 0.3
SHTN1-201ENST00000260777 CYP26B1Q9NR63 512 aa16.92■□□□□ 0.3
SHTN1-201ENST00000260777 HSPA8P11142 646 aaKnown RBP16.92■□□□□ 0.3
SHTN1-201ENST00000260777 RMDN3Q96TC7 470 aa16.92■□□□□ 0.3
SHTN1-201ENST00000260777 AGPAT1Q99943 283 aa16.92■□□□□ 0.3
SHTN1-201ENST00000260777 FAM213AQ9BRX8 229 aa16.92■□□□□ 0.3
SHTN1-201ENST00000260777 DDX56Q9NY93 547 aaKnown RBP16.92■□□□□ 0.3
SHTN1-201ENST00000260777 AMACRQ9UHK6 382 aa16.92■□□□□ 0.3
SHTN1-201ENST00000260777 INTUQ9ULD6 942 aa16.92■□□□□ 0.3
SHTN1-201ENST00000260777 HPCAL4Q9UM19 191 aa16.92■□□□□ 0.3
SHTN1-201ENST00000260777 DENND3A2RUS2 1198 aa16.92■□□□□ 0.3
SHTN1-201ENST00000260777 HAUS5O94927 633 aa16.92■□□□□ 0.3
SHTN1-201ENST00000260777 BYSLQ13895 437 aaKnown RBP16.92■□□□□ 0.3
SHTN1-201ENST00000260777 CENPKQ9BS16 269 aa16.92■□□□□ 0.3
SHTN1-201ENST00000260777 TUFT1Q9NNX1 390 aa16.92■□□□□ 0.3
SHTN1-201ENST00000260777 GUCY1A3Q02108 690 aa16.92■□□□□ 0.3
SHTN1-201ENST00000260777 PODNQ7Z5L7 613 aa16.92■□□□□ 0.3
SHTN1-201ENST00000260777 DPP9Q86TI2 863 aa16.92■□□□□ 0.3
SHTN1-201ENST00000260777 RSPH3Q86UC2 560 aa16.92■□□□□ 0.3
SHTN1-201ENST00000260777 GIMAP8Q8ND71 665 aaPredicted RBP16.92■□□□□ 0.3
SHTN1-201ENST00000260777 PDS5AQ29RF7 1337 aaKnown RBP16.92■□□□□ 0.3
SHTN1-201ENST00000260777 NEXMIFQ5QGS0 1516 aa16.92■□□□□ 0.3
SHTN1-201ENST00000260777 SPDYE16A6NNV3 312 aaPredicted RBP16.91■□□□□ 0.3
SHTN1-201ENST00000260777 HSPA4LO95757 839 aa16.91■□□□□ 0.3
SHTN1-201ENST00000260777 KRT14P02533 472 aa16.91■□□□□ 0.3
SHTN1-201ENST00000260777 ARL13BQ3SXY8 428 aa16.91■□□□□ 0.3
SHTN1-201ENST00000260777 SPDYE2Q495Y8 402 aa16.91■□□□□ 0.3
SHTN1-201ENST00000260777 THOC1Q96FV9 657 aaKnown RBP16.91■□□□□ 0.3
SHTN1-201ENST00000260777 APOBEC2Q9Y235 224 aaKnown RBP16.91■□□□□ 0.3
SHTN1-201ENST00000260777 PPRC1Q5VV67 1664 aaKnown RBP16.91■□□□□ 0.3
SHTN1-201ENST00000260777 INO80Q9ULG1 1556 aaPredicted RBP16.91■□□□□ 0.3
SHTN1-201ENST00000260777 MEFVO15553 781 aaPredicted RBP16.91■□□□□ 0.3
SHTN1-201ENST00000260777 GYPCP04921 128 aa16.91■□□□□ 0.3
SHTN1-201ENST00000260777 CDO1Q16878 200 aa16.91■□□□□ 0.3
SHTN1-201ENST00000260777 PASD1Q8IV76 773 aa16.91■□□□□ 0.3
SHTN1-201ENST00000260777 LXNQ9BS40 222 aa16.91■□□□□ 0.3
SHTN1-201ENST00000260777 ECT2Q9H8V3 914 aa16.91■□□□□ 0.3
SHTN1-201ENST00000260777 NGRNQ9NPE2 291 aaKnown RBP16.91■□□□□ 0.3
SHTN1-201ENST00000260777 KIAA1210Q9ULL0 1709 aa16.91■□□□□ 0.3
SHTN1-201ENST00000260777 ATP8B3O60423 1300 aa16.91■□□□□ 0.3
SHTN1-201ENST00000260777 MYO3BQ8WXR4 1341 aa16.91■□□□□ 0.3
SHTN1-201ENST00000260777 WDR46O15213 610 aaKnown RBP16.91■□□□□ 0.3
SHTN1-201ENST00000260777 EIF3HO15372 352 aaKnown RBP eCLIP16.91■□□□□ 0.32e-7■■□□□ 13.2
SHTN1-201ENST00000260777 AGTP01019 485 aa16.91■□□□□ 0.3
SHTN1-201ENST00000260777 RFX5P48382 616 aaPredicted RBP16.91■□□□□ 0.3
SHTN1-201ENST00000260777 CACNB3P54284 484 aa16.91■□□□□ 0.3
SHTN1-201ENST00000260777 DEUP1Q05D60 604 aa16.91■□□□□ 0.3
SHTN1-201ENST00000260777 FSCBQ5H9T9 825 aa16.91■□□□□ 0.3
SHTN1-201ENST00000260777 SYDE1Q6ZW31 735 aaPredicted RBP16.91■□□□□ 0.3
SHTN1-201ENST00000260777 DCLK2Q8N568 766 aa16.91■□□□□ 0.3
SHTN1-201ENST00000260777 RNF25Q96BH1 459 aaPredicted RBP16.91■□□□□ 0.3
SHTN1-201ENST00000260777 AGPAT5Q9NUQ2 364 aa16.91■□□□□ 0.3
SHTN1-201ENST00000260777 RTN2O75298 545 aa16.91■□□□□ 0.3
SHTN1-201ENST00000260777 CHGBP05060 677 aa16.91■□□□□ 0.3
SHTN1-201ENST00000260777 KRT7P08729 469 aa16.91■□□□□ 0.3
SHTN1-201ENST00000260777 POLE2P56282 527 aa16.91■□□□□ 0.3
SHTN1-201ENST00000260777 ZNF746Q6NUN9 644 aaPredicted RBP16.91■□□□□ 0.3
SHTN1-201ENST00000260777 HNRNPLLQ8WVV9 542 aaKnown RBP16.91■□□□□ 0.3
SHTN1-201ENST00000260777 SLC12A6Q9UHW9 1150 aa16.91■□□□□ 0.3
SHTN1-201ENST00000260777 UBE4BO95155 1302 aa16.9■□□□□ 0.3
SHTN1-201ENST00000260777 EMSYQ7Z589 1322 aa16.9■□□□□ 0.3
SHTN1-201ENST00000260777 F5H6K3 240 aa16.9■□□□□ 0.3
SHTN1-201ENST00000260777 HSPA9P38646 679 aaKnown RBP16.9■□□□□ 0.3
SHTN1-201ENST00000260777 KLRC3Q07444 240 aa16.9■□□□□ 0.3
SHTN1-201ENST00000260777 EPHA7Q15375 998 aa16.9■□□□□ 0.3
SHTN1-201ENST00000260777 ZNF699Q32M78 642 aa16.9■□□□□ 0.3
SHTN1-201ENST00000260777 EAPPQ56P03 285 aaPredicted RBP16.9■□□□□ 0.3
SHTN1-201ENST00000260777 KRT80Q6KB66 452 aa16.9■□□□□ 0.3
SHTN1-201ENST00000260777 RTKN2Q8IZC4 609 aa16.9■□□□□ 0.3
SHTN1-201ENST00000260777 TNFAIP2Q03169 654 aa16.9■□□□□ 0.3
SHTN1-201ENST00000260777 TAF1BQ53T94 588 aaPredicted RBP16.9■□□□□ 0.3
SHTN1-201ENST00000260777 ANGPTL3Q9Y5C1 460 aa16.9■□□□□ 0.3
SHTN1-201ENST00000260777 TAF6LQ9Y6J9 622 aa16.9■□□□□ 0.3
SHTN1-201ENST00000260777 MGEA5O60502 916 aa16.9■□□□□ 0.3
SHTN1-201ENST00000260777 PFDN1O60925 122 aa16.9■□□□□ 0.3
SHTN1-201ENST00000260777 TRIM49P0CI25 452 aa16.9■□□□□ 0.3
SHTN1-201ENST00000260777 TRIM49CP0CI26 452 aa16.9■□□□□ 0.3
SHTN1-201ENST00000260777 STMN1P16949 149 aa16.9■□□□□ 0.3
SHTN1-201ENST00000260777 ZNF18P17022 549 aa16.9■□□□□ 0.3
SHTN1-201ENST00000260777 GNA15P30679 374 aa16.9■□□□□ 0.3
SHTN1-201ENST00000260777 DHX38Q92620 1227 aaKnown RBP16.9■□□□□ 0.3
SHTN1-201ENST00000260777 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.9■□□□□ 0.3
SHTN1-201ENST00000260777 ARHGEF37A1IGU5 675 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms