RNA–Protein interactions for RNA: ENST00000251775.8

SNX4-201, Transcript of sorting nexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX4, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-201ENST00000251775 CCDC26Q8TAB7 109 aa20.49■□□□□ 0.87
SNX4-201ENST00000251775 ARHGEF10LQ9HCE6 1279 aa20.49■□□□□ 0.87
SNX4-201ENST00000251775 TMX2Q9Y320 296 aa20.49■□□□□ 0.87
SNX4-201ENST00000251775 PSME4Q14997 1843 aa20.49■□□□□ 0.87
SNX4-201ENST00000251775 TBCAO75347 108 aaKnown RBP20.49■□□□□ 0.87
SNX4-201ENST00000251775 SLITRK3O94933 977 aa20.49■□□□□ 0.87
SNX4-201ENST00000251775 UBXN2AP68543 259 aa20.49■□□□□ 0.87
SNX4-201ENST00000251775 POU5F1Q01860 360 aaKnown RBP20.49■□□□□ 0.87
SNX4-201ENST00000251775 PEX26Q7Z412 305 aa20.49■□□□□ 0.87
SNX4-201ENST00000251775 ATP8B4Q8TF62 1192 aa20.49■□□□□ 0.87
SNX4-201ENST00000251775 IKZF4Q9H2S9 585 aa20.49■□□□□ 0.87
SNX4-201ENST00000251775 FAM114A2Q9NRY5 505 aa20.49■□□□□ 0.87
SNX4-201ENST00000251775 ZBTB39O15060 712 aa20.48■□□□□ 0.87
SNX4-201ENST00000251775 CLIC2O15247 247 aa20.48■□□□□ 0.87
SNX4-201ENST00000251775 PPFIA2O75334 1257 aa20.48■□□□□ 0.87
SNX4-201ENST00000251775 ECM2O94769 699 aaPredicted RBP20.48■□□□□ 0.87
SNX4-201ENST00000251775 XRCC5P13010 732 aaKnown RBP20.48■□□□□ 0.87
SNX4-201ENST00000251775 UCHL3P15374 230 aa20.48■□□□□ 0.87
SNX4-201ENST00000251775 PON1P27169 355 aa20.48■□□□□ 0.87
SNX4-201ENST00000251775 PPP1R7Q15435 360 aa20.48■□□□□ 0.87
SNX4-201ENST00000251775 ACCSLQ4AC99 568 aa20.48■□□□□ 0.87
SNX4-201ENST00000251775 DCAF17Q5H9S7 520 aaPredicted RBP20.48■□□□□ 0.87
SNX4-201ENST00000251775 ALKBH5Q6P6C2 394 aaKnown RBP20.48■□□□□ 0.87
SNX4-201ENST00000251775 DYDC2Q96IM9 177 aa20.48■□□□□ 0.87
SNX4-201ENST00000251775 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.48■□□□□ 0.87
SNX4-201ENST00000251775 ATP8A1Q9Y2Q0 1164 aa20.48■□□□□ 0.87
SNX4-201ENST00000251775 CHMP2AO43633 222 aa20.48■□□□□ 0.87
SNX4-201ENST00000251775 PSMD10O75832 226 aa20.48■□□□□ 0.87
SNX4-201ENST00000251775 MYCNP04198 464 aaPredicted RBP20.48■□□□□ 0.87
SNX4-201ENST00000251775 EIF3BP55884 814 aaKnown RBP20.48■□□□□ 0.87
SNX4-201ENST00000251775 TPH2Q8IWU9 490 aa20.48■□□□□ 0.87
SNX4-201ENST00000251775 SUCLA2Q9P2R7 463 aaPredicted RBP20.48■□□□□ 0.87
SNX4-201ENST00000251775 SLC12A4Q9UP95 1085 aa20.48■□□□□ 0.87
SNX4-201ENST00000251775 UTP11Q9Y3A2 253 aaKnown RBP20.48■□□□□ 0.87
SNX4-201ENST00000251775 SPDYE2BA6NHP3 402 aa20.47■□□□□ 0.87
SNX4-201ENST00000251775 RPSAP08865 295 aaKnown RBP20.47■□□□□ 0.87
SNX4-201ENST00000251775 SPDYE6P0CI01 402 aa20.47■□□□□ 0.87
SNX4-201ENST00000251775 CHN1P15882 459 aa20.47■□□□□ 0.87
SNX4-201ENST00000251775 PAX7P23759 505 aa20.47■□□□□ 0.87
SNX4-201ENST00000251775 EPHA7Q15375 998 aa20.47■□□□□ 0.87
SNX4-201ENST00000251775 LRCH2Q5VUJ6 765 aa20.47■□□□□ 0.87
SNX4-201ENST00000251775 TRIM51Q9BSJ1 452 aa20.47■□□□□ 0.87
SNX4-201ENST00000251775 BAIAP2L1Q9UHR4 511 aa20.47■□□□□ 0.87
SNX4-201ENST00000251775 NENFQ9UMX5 172 aa20.47■□□□□ 0.87
SNX4-201ENST00000251775 TGFB1I1O43294 461 aa20.47■□□□□ 0.87
SNX4-201ENST00000251775 PPP1R12BO60237 982 aaPredicted RBP20.47■□□□□ 0.87
SNX4-201ENST00000251775 RTN2O75298 545 aa20.47■□□□□ 0.87
SNX4-201ENST00000251775 EXOC3L4Q17RC7 722 aa20.47■□□□□ 0.87
SNX4-201ENST00000251775 ATXN2LQ8WWM7 1075 aaKnown RBP20.47■□□□□ 0.87
SNX4-201ENST00000251775 TBC1D31Q96DN5 1066 aa20.47■□□□□ 0.87
SNX4-201ENST00000251775 FMO2Q99518 471 aa20.47■□□□□ 0.87
SNX4-201ENST00000251775 EPB41L4BQ9H329 900 aa20.47■□□□□ 0.87
SNX4-201ENST00000251775 TUFT1Q9NNX1 390 aa20.47■□□□□ 0.87
SNX4-201ENST00000251775 OLFML3Q9NRN5 406 aa20.47■□□□□ 0.87
SNX4-201ENST00000251775 TMOD2Q9NZR1 351 aa20.47■□□□□ 0.87
SNX4-201ENST00000251775 ZBTB21Q9ULJ3 1066 aa20.47■□□□□ 0.87
SNX4-201ENST00000251775 A0A1B0GUA9 196 aa20.46■□□□□ 0.87
SNX4-201ENST00000251775 SHBGP04278 402 aa20.46■□□□□ 0.87
SNX4-201ENST00000251775 POLR2MP0CAP2 368 aa20.46■□□□□ 0.87
SNX4-201ENST00000251775 NMT1P30419 496 aaKnown RBP20.46■□□□□ 0.87
SNX4-201ENST00000251775 TCERG1LQ5VWI1 586 aa20.46■□□□□ 0.87
SNX4-201ENST00000251775 C1orf186Q6ZWK4 172 aa20.46■□□□□ 0.87
SNX4-201ENST00000251775 PIGWQ7Z7B1 504 aa20.46■□□□□ 0.87
SNX4-201ENST00000251775 NT5DC3Q86UY8 548 aa20.46■□□□□ 0.87
SNX4-201ENST00000251775 KIRREL3Q8IZU9 778 aa20.46■□□□□ 0.87
SNX4-201ENST00000251775 RBM46Q8TBY0 533 aaKnown RBP20.46■□□□□ 0.87
SNX4-201ENST00000251775 SLC5A5Q92911 643 aa20.46■□□□□ 0.87
SNX4-201ENST00000251775 SLC35C1Q96A29 364 aa20.46■□□□□ 0.87
SNX4-201ENST00000251775 TRIM31Q9BZY9 425 aa20.46■□□□□ 0.87
SNX4-201ENST00000251775 ZNF70Q9UC06 446 aaPredicted RBP20.46■□□□□ 0.87
SNX4-201ENST00000251775 AJAP1Q9UKB5 411 aaPredicted RBP20.46■□□□□ 0.87
SNX4-201ENST00000251775 BZW2Q9Y6E2 419 aaKnown RBP20.46■□□□□ 0.87
SNX4-201ENST00000251775 ZMYM2Q9UBW7 1377 aa20.46■□□□□ 0.87
SNX4-201ENST00000251775 ASAP2O43150 1006 aa20.46■□□□□ 0.87
SNX4-201ENST00000251775 GSTA1P08263 222 aa20.46■□□□□ 0.87
SNX4-201ENST00000251775 MMEP08473 750 aa20.46■□□□□ 0.87
SNX4-201ENST00000251775 PPP2R5CQ13362 524 aa20.46■□□□□ 0.87
SNX4-201ENST00000251775 SPDYCQ5MJ68 293 aa20.46■□□□□ 0.87
SNX4-201ENST00000251775 CDAN1Q8IWY9 1227 aa20.46■□□□□ 0.87
SNX4-201ENST00000251775 SUPT20HQ8NEM7 779 aa20.46■□□□□ 0.87
SNX4-201ENST00000251775 SPAG5Q96R06 1193 aa20.46■□□□□ 0.87
SNX4-201ENST00000251775 RANBP17Q9H2T7 1088 aaKnown RBP20.46■□□□□ 0.87
SNX4-201ENST00000251775 ADAM7Q9H2U9 754 aa20.46■□□□□ 0.87
SNX4-201ENST00000251775 GOPCQ9HD26 462 aa20.46■□□□□ 0.87
SNX4-201ENST00000251775 SIX2Q9NPC8 291 aa20.46■□□□□ 0.87
SNX4-201ENST00000251775 NR2E1Q9Y466 385 aa20.46■□□□□ 0.87
SNX4-201ENST00000251775 CNTNAP1P78357 1384 aa20.45■□□□□ 0.86
SNX4-201ENST00000251775 GAP43P17677 238 aa20.45■□□□□ 0.86
SNX4-201ENST00000251775 RPL13P26373 211 aaKnown RBP20.45■□□□□ 0.86
SNX4-201ENST00000251775 ITIH4Q14624 930 aa20.45■□□□□ 0.86
SNX4-201ENST00000251775 ZYXQ15942 572 aaKnown RBP20.45■□□□□ 0.86
SNX4-201ENST00000251775 ZC2HC1CQ53FD0 456 aaPredicted RBP20.45■□□□□ 0.86
SNX4-201ENST00000251775 ANKS4BQ8N8V4 417 aa20.45■□□□□ 0.86
SNX4-201ENST00000251775 CCDC63Q8NA47 563 aa20.45■□□□□ 0.86
SNX4-201ENST00000251775 FAM151AQ8WW52 585 aa20.45■□□□□ 0.86
SNX4-201ENST00000251775 METTL14Q9HCE5 456 aaKnown RBP20.45■□□□□ 0.86
SNX4-201ENST00000251775 PCDHB13Q9Y5F0 798 aa20.45■□□□□ 0.86
SNX4-201ENST00000251775 SLC16A3O15427 465 aaKnown RBP20.45■□□□□ 0.86
SNX4-201ENST00000251775 FAM13AO94988 1023 aa20.45■□□□□ 0.86
SNX4-201ENST00000251775 GBP2P32456 591 aaPredicted RBP20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms