RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 EPAS1Q99814 870 aa14.1□□□□□ -0.15
COL1A1-201ENST00000225964 TRIM55Q9BYV6 548 aa14.1□□□□□ -0.15
COL1A1-201ENST00000225964 ZC3H4Q9UPT8 1303 aaKnown RBP14.1□□□□□ -0.15
COL1A1-201ENST00000225964 USP6P35125 1406 aa14.1□□□□□ -0.15
COL1A1-201ENST00000225964 STAT3P40763 770 aa14.1□□□□□ -0.15
COL1A1-201ENST00000225964 VAMP7P51809 220 aa14.1□□□□□ -0.15
COL1A1-201ENST00000225964 XXYLT1Q8NBI6 393 aa14.1□□□□□ -0.15
COL1A1-201ENST00000225964 TDRD7Q8NHU6 1098 aaKnown RBP14.1□□□□□ -0.15
COL1A1-201ENST00000225964 NUP85Q9BW27 656 aa14.1□□□□□ -0.15
COL1A1-201ENST00000225964 TRPV6Q9H1D0 765 aa14.1□□□□□ -0.15
COL1A1-201ENST00000225964 ACAD9Q9H845 621 aa14.1□□□□□ -0.15
COL1A1-201ENST00000225964 TNPO2O14787 897 aaKnown RBP14.1□□□□□ -0.15
COL1A1-201ENST00000225964 UPP2O95045 317 aa14.1□□□□□ -0.15
COL1A1-201ENST00000225964 SERPIND1P05546 499 aa14.1□□□□□ -0.15
COL1A1-201ENST00000225964 SDC4P31431 198 aa14.1□□□□□ -0.15
COL1A1-201ENST00000225964 DOLKQ9UPQ8 538 aa14.1□□□□□ -0.15
COL1A1-201ENST00000225964 PIK3R2O00459 728 aa14.1□□□□□ -0.15
COL1A1-201ENST00000225964 MAPK13O15264 365 aa14.1□□□□□ -0.15
COL1A1-201ENST00000225964 MYO1DO94832 1006 aa14.1□□□□□ -0.15
COL1A1-201ENST00000225964 IRF1P10914 325 aa14.1□□□□□ -0.15
COL1A1-201ENST00000225964 PSMC1P62191 440 aaKnown RBP14.1□□□□□ -0.15
COL1A1-201ENST00000225964 ADCY2Q08462 1091 aa14.1□□□□□ -0.15
COL1A1-201ENST00000225964 ALKBH5Q6P6C2 394 aaKnown RBP14.1□□□□□ -0.15
COL1A1-201ENST00000225964 RMDN1Q96DB5 314 aa14.1□□□□□ -0.15
COL1A1-201ENST00000225964 DDX50Q9BQ39 737 aaKnown RBP14.1□□□□□ -0.15
COL1A1-201ENST00000225964 MINPP1Q9UNW1 487 aa14.1□□□□□ -0.15
COL1A1-201ENST00000225964 A0A0G2JND7 137 aa14.09□□□□□ -0.15
COL1A1-201ENST00000225964 E9PMD0 336 aa14.09□□□□□ -0.15
COL1A1-201ENST00000225964 SFNP31947 248 aa14.09□□□□□ -0.15
COL1A1-201ENST00000225964 BLVRAP53004 296 aa14.09□□□□□ -0.15
COL1A1-201ENST00000225964 ARL6IP4Q66PJ3 421 aaKnown RBP14.09□□□□□ -0.15
COL1A1-201ENST00000225964 ANKS3Q6ZW76 656 aa14.09□□□□□ -0.15
COL1A1-201ENST00000225964 SAAL1Q96ER3 474 aa14.09□□□□□ -0.15
COL1A1-201ENST00000225964 TJP2Q9UDY2 1190 aa14.09□□□□□ -0.15
COL1A1-201ENST00000225964 DIS3Q9Y2L1 958 aaKnown RBP14.09□□□□□ -0.15
COL1A1-201ENST00000225964 CLASP1Q7Z460 1538 aa14.09□□□□□ -0.15
COL1A1-201ENST00000225964 KRT37O76014 449 aa14.09□□□□□ -0.15
COL1A1-201ENST00000225964 CYBBP04839 570 aa14.09□□□□□ -0.15
COL1A1-201ENST00000225964 TBXAS1P24557 533 aaPredicted RBP14.09□□□□□ -0.15
COL1A1-201ENST00000225964 ARL4DP49703 201 aa14.09□□□□□ -0.15
COL1A1-201ENST00000225964 PRAMEP78395 509 aa14.09□□□□□ -0.15
COL1A1-201ENST00000225964 KRT31Q15323 416 aa14.09□□□□□ -0.15
COL1A1-201ENST00000225964 E2F5Q15329 346 aa14.09□□□□□ -0.15
COL1A1-201ENST00000225964 TMEM47Q9BQJ4 181 aa14.09□□□□□ -0.15
COL1A1-201ENST00000225964 SMYD3Q9H7B4 428 aa14.09□□□□□ -0.15
COL1A1-201ENST00000225964 CD209Q9NNX6 404 aa14.09□□□□□ -0.15
COL1A1-201ENST00000225964 TTC7AQ9ULT0 858 aaPredicted RBP14.09□□□□□ -0.15
COL1A1-201ENST00000225964 CYP2E1P05181 493 aaPredicted RBP14.09□□□□□ -0.15
COL1A1-201ENST00000225964 GPC5P78333 572 aa14.09□□□□□ -0.15
COL1A1-201ENST00000225964 COASYQ13057 564 aa14.09□□□□□ -0.15
COL1A1-201ENST00000225964 GTF2H3Q13889 308 aa14.09□□□□□ -0.15
COL1A1-201ENST00000225964 HEATR6Q6AI08 1181 aaKnown RBP14.09□□□□□ -0.15
COL1A1-201ENST00000225964 RNF168Q8IYW5 571 aaPredicted RBP14.09□□□□□ -0.15
COL1A1-201ENST00000225964 ADGRF4Q8IZF3 695 aa14.09□□□□□ -0.15
COL1A1-201ENST00000225964 WDR48Q8TAF3 677 aa14.09□□□□□ -0.15
COL1A1-201ENST00000225964 C11orf70Q9BRQ4 267 aa14.09□□□□□ -0.15
COL1A1-201ENST00000225964 RNF14Q9UBS8 474 aa14.09□□□□□ -0.15
COL1A1-201ENST00000225964 PRDX5P30044 214 aa14.09□□□□□ -0.15
COL1A1-201ENST00000225964 RAD51Q06609 339 aa14.09□□□□□ -0.15
COL1A1-201ENST00000225964 ZNF235Q14590 738 aa14.09□□□□□ -0.15
COL1A1-201ENST00000225964 SEPT8Q92599 483 aa14.09□□□□□ -0.15
COL1A1-201ENST00000225964 OTULINQ96BN8 352 aa14.09□□□□□ -0.15
COL1A1-201ENST00000225964 CEP95Q96GE4 821 aa14.09□□□□□ -0.15
COL1A1-201ENST00000225964 LCMT1Q9UIC8 334 aa14.09□□□□□ -0.15
COL1A1-201ENST00000225964 ROR1Q01973 937 aa14.09□□□□□ -0.15
COL1A1-201ENST00000225964 EN1Q05925 392 aaPredicted RBP14.09□□□□□ -0.15
COL1A1-201ENST00000225964 KDELC2Q7Z4H8 507 aa14.09□□□□□ -0.15
COL1A1-201ENST00000225964 TTC13Q8NBP0 860 aa14.09□□□□□ -0.15
COL1A1-201ENST00000225964 SH3TC2Q8TF17 1288 aa14.09□□□□□ -0.15
COL1A1-201ENST00000225964 DCUN1D1Q96GG9 259 aa14.09□□□□□ -0.15
COL1A1-201ENST00000225964 MROH7-TTC4A0A0A0MT08 1334 aa14.09□□□□□ -0.15
COL1A1-201ENST00000225964 UTYO14607 1347 aa14.09□□□□□ -0.15
COL1A1-201ENST00000225964 TFDP2Q14188 446 aa14.08□□□□□ -0.15
COL1A1-201ENST00000225964 TAGAPQ8N103 731 aa14.08□□□□□ -0.15
COL1A1-201ENST00000225964 ZC3H15Q8WU90 426 aaKnown RBP14.08□□□□□ -0.15
COL1A1-201ENST00000225964 RPAP1Q9BWH6 1393 aaPredicted RBP14.08□□□□□ -0.15
COL1A1-201ENST00000225964 POTEB3A0JP26 581 aa14.08□□□□□ -0.16
COL1A1-201ENST00000225964 SYCE1LA8MT33 242 aa14.08□□□□□ -0.16
COL1A1-201ENST00000225964 POTECB2RU33 542 aa14.08□□□□□ -0.16
COL1A1-201ENST00000225964 PYGBP11216 843 aa14.08□□□□□ -0.16
COL1A1-201ENST00000225964 GRAMD1BQ3KR37 738 aa14.08□□□□□ -0.16
COL1A1-201ENST00000225964 POTEBQ6S5H4 581 aa14.08□□□□□ -0.16
COL1A1-201ENST00000225964 CLEC4GQ6UXB4 293 aa14.08□□□□□ -0.16
COL1A1-201ENST00000225964 ENOX1Q8TC92 643 aaKnown RBP14.08□□□□□ -0.16
COL1A1-201ENST00000225964 RNF25Q96BH1 459 aaPredicted RBP14.08□□□□□ -0.16
COL1A1-201ENST00000225964 ADAMTS1Q9UHI8 967 aa14.08□□□□□ -0.16
COL1A1-201ENST00000225964 PIN4Q9Y237 131 aaKnown RBP14.08□□□□□ -0.16
COL1A1-201ENST00000225964 MRPS25P82663 173 aaKnown RBP14.08□□□□□ -0.16
COL1A1-201ENST00000225964 NAALADL2Q58DX5 795 aa14.08□□□□□ -0.16
COL1A1-201ENST00000225964 CCNYL1Q8N7R7 359 aa14.08□□□□□ -0.16
COL1A1-201ENST00000225964 DHX35Q9H5Z1 703 aaKnown RBP14.08□□□□□ -0.16
COL1A1-201ENST00000225964 STX18Q9P2W9 335 aaKnown RBP14.08□□□□□ -0.16
COL1A1-201ENST00000225964 PPARGC1AQ9UBK2 798 aaKnown RBP14.08□□□□□ -0.16
COL1A1-201ENST00000225964 ALDH1A1P00352 501 aa14.08□□□□□ -0.16
COL1A1-201ENST00000225964 SULT1E1P49888 294 aa14.08□□□□□ -0.16
COL1A1-201ENST00000225964 FLOT2Q14254 428 aa14.08□□□□□ -0.16
COL1A1-201ENST00000225964 FSCBQ5H9T9 825 aa14.08□□□□□ -0.16
COL1A1-201ENST00000225964 TRIM54Q9BYV2 358 aa14.08□□□□□ -0.16
COL1A1-201ENST00000225964 CEP72Q9P209 647 aa14.08□□□□□ -0.16
COL1A1-201ENST00000225964 IP6K2Q9UHH9 426 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms