RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 TCP11Q8WWU5 503 aa19.83■□□□□ 0.76
VIM-201ENST00000224237 SOCS4Q8WXH5 440 aa19.83■□□□□ 0.76
VIM-201ENST00000224237 C16orf45Q96MC5 204 aaPredicted RBP19.83■□□□□ 0.76
VIM-201ENST00000224237 ZNHIT6Q9NWK9 470 aaKnown RBP19.83■□□□□ 0.76
VIM-201ENST00000224237 GTPBP10A4D1E9 387 aaKnown RBP19.82■□□□□ 0.76
VIM-201ENST00000224237 TISP43B9A030 160 aa19.82■□□□□ 0.76
VIM-201ENST00000224237 EPHB6O15197 1021 aa19.82■□□□□ 0.76
VIM-201ENST00000224237 CA12O43570 354 aa19.82■□□□□ 0.76
VIM-201ENST00000224237 LGALS2P05162 132 aa19.82■□□□□ 0.76
VIM-201ENST00000224237 BFSP1Q12934 665 aa19.82■□□□□ 0.76
VIM-201ENST00000224237 MEA1Q16626 185 aa19.82■□□□□ 0.76
VIM-201ENST00000224237 PRAMEF19Q5SWL8 479 aa19.82■□□□□ 0.76
VIM-201ENST00000224237 INTS8Q75QN2 995 aaKnown RBP19.82■□□□□ 0.76
VIM-201ENST00000224237 AFG1LQ8WV93 481 aa19.82■□□□□ 0.76
VIM-201ENST00000224237 LSM14BQ9BX40 385 aaKnown RBP19.82■□□□□ 0.76
VIM-201ENST00000224237 PCIF1Q9H4Z3 704 aa19.82■□□□□ 0.76
VIM-201ENST00000224237 LRRIQ4A6NIV6 560 aa19.82■□□□□ 0.76
VIM-201ENST00000224237 ZBTB42B2RXF5 422 aa19.82■□□□□ 0.76
VIM-201ENST00000224237 ADCY6O43306 1168 aa19.82■□□□□ 0.76
VIM-201ENST00000224237 KRT13P13646 458 aa19.82■□□□□ 0.76
VIM-201ENST00000224237 SMPD1P17405 629 aa19.82■□□□□ 0.76
VIM-201ENST00000224237 CYP2B6P20813 491 aa19.82■□□□□ 0.76
VIM-201ENST00000224237 IER5Q5VY09 327 aa19.82■□□□□ 0.76
VIM-201ENST00000224237 RAD9BQ6WBX8 426 aa19.82■□□□□ 0.76
VIM-201ENST00000224237 TOGARAM2Q6ZUX3 1019 aa19.82■□□□□ 0.76
VIM-201ENST00000224237 CACNA2D4Q7Z3S7 1137 aa19.82■□□□□ 0.76
VIM-201ENST00000224237 DEPTORQ8TB45 409 aa19.82■□□□□ 0.76
VIM-201ENST00000224237 USP6NLQ92738 828 aa19.82■□□□□ 0.76
VIM-201ENST00000224237 CEP72Q9P209 647 aa19.82■□□□□ 0.76
VIM-201ENST00000224237 PPP2R2CQ9Y2T4 447 aa19.82■□□□□ 0.76
VIM-201ENST00000224237 SIP14410 1827 aa19.81■□□□□ 0.76
VIM-201ENST00000224237 IGKV6-21A0A0C4DH24 114 aa19.81■□□□□ 0.76
VIM-201ENST00000224237 TNPO2O14787 897 aaKnown RBP19.81■□□□□ 0.76
VIM-201ENST00000224237 HNRNPDLO14979 420 aaKnown RBP19.81■□□□□ 0.76
VIM-201ENST00000224237 PPFIA4O75335 1185 aa19.81■□□□□ 0.76
VIM-201ENST00000224237 RGS2P41220 211 aa19.81■□□□□ 0.76
VIM-201ENST00000224237 STRN3Q13033 797 aa19.81■□□□□ 0.76
VIM-201ENST00000224237 MTF1Q14872 753 aa19.81■□□□□ 0.76
VIM-201ENST00000224237 PTPN14Q15678 1187 aa19.81■□□□□ 0.76
VIM-201ENST00000224237 EXOC3L4Q17RC7 722 aa19.81■□□□□ 0.76
VIM-201ENST00000224237 NYAP1Q6ZVC0 841 aa19.81■□□□□ 0.76
VIM-201ENST00000224237 TAS1R3Q7RTX0 852 aa19.81■□□□□ 0.76
VIM-201ENST00000224237 CAPNS2Q96L46 248 aa19.81■□□□□ 0.76
VIM-201ENST00000224237 CRACR2AQ9BSW2 395 aa19.81■□□□□ 0.76
VIM-201ENST00000224237 ARHGAP39Q9C0H5 1083 aa19.81■□□□□ 0.76
VIM-201ENST00000224237 GOLGA6L9A6NEM1 432 aa19.8■□□□□ 0.76
VIM-201ENST00000224237 ANKRD63C9JTQ0 380 aa19.8■□□□□ 0.76
VIM-201ENST00000224237 CCDC175P0C221 793 aa19.8■□□□□ 0.76
VIM-201ENST00000224237 ADSSP30520 456 aa19.8■□□□□ 0.76
VIM-201ENST00000224237 HNRNPH3P31942 346 aaKnown RBP19.8■□□□□ 0.76
VIM-201ENST00000224237 WDR59Q6PJI9 974 aa19.8■□□□□ 0.76
VIM-201ENST00000224237 GBP6Q6ZN66 633 aa19.8■□□□□ 0.76
VIM-201ENST00000224237 RDH13Q8NBN7 331 aa19.8■□□□□ 0.76
VIM-201ENST00000224237 OR6J1Q8NGC5 347 aa19.8■□□□□ 0.76
VIM-201ENST00000224237 BICD1Q96G01 975 aa19.8■□□□□ 0.76
VIM-201ENST00000224237 NUCKS1Q9H1E3 243 aaKnown RBP19.8■□□□□ 0.76
VIM-201ENST00000224237 PLCB1Q9NQ66 1216 aa19.8■□□□□ 0.76
VIM-201ENST00000224237 GJD2Q9UKL4 321 aa19.8■□□□□ 0.76
VIM-201ENST00000224237 ZNF215Q9UL58 517 aaPredicted RBP19.8■□□□□ 0.76
VIM-201ENST00000224237 PLAGL2Q9UPG8 496 aa19.8■□□□□ 0.76
VIM-201ENST00000224237 NOL4O94818 638 aa19.79■□□□□ 0.76
VIM-201ENST00000224237 GARTP22102 1010 aa19.79■□□□□ 0.76
VIM-201ENST00000224237 CYP2C19P33261 490 aa19.79■□□□□ 0.76
VIM-201ENST00000224237 CDK17Q00537 523 aa19.79■□□□□ 0.76
VIM-201ENST00000224237 NOGQ13253 232 aa19.79■□□□□ 0.76
VIM-201ENST00000224237 MXD4Q14582 209 aaPredicted RBP19.79■□□□□ 0.76
VIM-201ENST00000224237 OLFML2BQ68BL8 750 aa19.79■□□□□ 0.76
VIM-201ENST00000224237 PSPC1Q8WXF1 523 aaKnown RBP19.79■□□□□ 0.76
VIM-201ENST00000224237 BAP1Q92560 729 aa19.79■□□□□ 0.76
VIM-201ENST00000224237 APBA2Q99767 749 aa19.79■□□□□ 0.76
VIM-201ENST00000224237 PHLPP2Q6ZVD8 1323 aa19.79■□□□□ 0.76
VIM-201ENST00000224237 KIF2AO00139 706 aaPredicted RBP19.79■□□□□ 0.76
VIM-201ENST00000224237 ALDH1A1P00352 501 aa19.79■□□□□ 0.76
VIM-201ENST00000224237 HOXD8P13378 290 aaPredicted RBP19.79■□□□□ 0.76
VIM-201ENST00000224237 TNNT1P13805 278 aa19.79■□□□□ 0.76
VIM-201ENST00000224237 FMO5P49326 533 aa19.79■□□□□ 0.76
VIM-201ENST00000224237 TNFAIP2Q03169 654 aa19.79■□□□□ 0.76
VIM-201ENST00000224237 CAPSQ13938 189 aa19.79■□□□□ 0.76
VIM-201ENST00000224237 DEFB115Q30KQ5 88 aa19.79■□□□□ 0.76
VIM-201ENST00000224237 ZNF484Q5JVG2 852 aa19.79■□□□□ 0.76
VIM-201ENST00000224237 SLC39A4Q6P5W5 647 aa19.79■□□□□ 0.76
VIM-201ENST00000224237 POMGNT1Q8WZA1 660 aa19.79■□□□□ 0.76
VIM-201ENST00000224237 CHP1Q99653 195 aa19.79■□□□□ 0.76
VIM-201ENST00000224237 RNPEPQ9H4A4 650 aa19.79■□□□□ 0.76
VIM-201ENST00000224237 TMEM134Q9H6X4 195 aa19.79■□□□□ 0.76
VIM-201ENST00000224237 SUGCTQ9HAC7 445 aa19.79■□□□□ 0.76
VIM-201ENST00000224237 GCNT4Q9P109 453 aa19.79■□□□□ 0.76
VIM-201ENST00000224237 MGAMO43451 1857 aa19.79■□□□□ 0.76
VIM-201ENST00000224237 CENPFP49454 3210 aa19.78■□□□□ 0.76
VIM-201ENST00000224237 K7ERI5 159 aa19.78■□□□□ 0.76
VIM-201ENST00000224237 MMP3P08254 477 aa19.78■□□□□ 0.76
VIM-201ENST00000224237 LIG4P49917 911 aa19.78■□□□□ 0.76
VIM-201ENST00000224237 DRP2Q13474 957 aa19.78■□□□□ 0.76
VIM-201ENST00000224237 RRAGAQ7L523 313 aa19.78■□□□□ 0.76
VIM-201ENST00000224237 ZNF784Q8NCA9 323 aaPredicted RBP19.78■□□□□ 0.76
VIM-201ENST00000224237 PRPF31Q8WWY3 499 aaKnown RBP19.78■□□□□ 0.76
VIM-201ENST00000224237 LENG1Q96BZ8 264 aaPredicted RBP19.78■□□□□ 0.76
VIM-201ENST00000224237 DESI2Q9BSY9 194 aa19.78■□□□□ 0.76
VIM-201ENST00000224237 ADGRG1Q9Y653 693 aa19.78■□□□□ 0.76
VIM-201ENST00000224237 LRRC53A6NM62 1247 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms