RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 TwistnbQ78WZ7 330 aaKnown RBP13.93□□□□□ -0.18
Nup88-203ENSMUST00000108531 Unc5bQ8K1S3 945 aa13.93□□□□□ -0.18
Nup88-203ENSMUST00000108531 Atp2a1Q8R429 994 aa13.93□□□□□ -0.18
Nup88-203ENSMUST00000108531 Dnajc28Q8VCE1 385 aa13.93□□□□□ -0.18
Nup88-203ENSMUST00000108531 Ssr1Q9CY50 286 aaKnown RBP13.93□□□□□ -0.18
Nup88-203ENSMUST00000108531 Rtn3Q9ES97 964 aa13.93□□□□□ -0.18
Nup88-203ENSMUST00000108531 Myoz2Q9JJW5 264 aa13.93□□□□□ -0.18
Nup88-203ENSMUST00000108531 Krt71Q9R0H5 524 aa13.93□□□□□ -0.18
Nup88-203ENSMUST00000108531 Col4a5Q63ZW6 1691 aa13.93□□□□□ -0.18
Nup88-203ENSMUST00000108531 Gm382B1AXN3 1250 aa13.92□□□□□ -0.18
Nup88-203ENSMUST00000108531 Calb1P12658 261 aa13.92□□□□□ -0.18
Nup88-203ENSMUST00000108531 Hoxa11P31311 313 aa13.92□□□□□ -0.18
Nup88-203ENSMUST00000108531 Cep126Q0VBV7 1103 aa13.92□□□□□ -0.18
Nup88-203ENSMUST00000108531 Ice2Q3UZ18 988 aaKnown RBP13.92□□□□□ -0.18
Nup88-203ENSMUST00000108531 Klra6Q60653 266 aa13.92□□□□□ -0.18
Nup88-203ENSMUST00000108531 Vav2Q60992 868 aa13.92□□□□□ -0.18
Nup88-203ENSMUST00000108531 Msantd2Q6NZR2 559 aa13.92□□□□□ -0.18
Nup88-203ENSMUST00000108531 Tas2r134Q7TQB0 298 aa13.92□□□□□ -0.18
Nup88-203ENSMUST00000108531 Sh3d21Q7TSG5 549 aa13.92□□□□□ -0.18
Nup88-203ENSMUST00000108531 Efl1Q8C0D5 1127 aa13.92□□□□□ -0.18
Nup88-203ENSMUST00000108531 Lin9Q8C735 542 aa13.92□□□□□ -0.18
Nup88-203ENSMUST00000108531 Dnm1lQ8K1M6 742 aa13.92□□□□□ -0.18
Nup88-203ENSMUST00000108531 Cntnap2Q9CPW0 1332 aa13.92□□□□□ -0.18
Nup88-203ENSMUST00000108531 Znf354bQ9QXT9 601 aa13.92□□□□□ -0.18
Nup88-203ENSMUST00000108531 Grk1Q9WVL4 564 aa13.92□□□□□ -0.18
Nup88-203ENSMUST00000108531 Cyp11b2P15539 500 aa13.92□□□□□ -0.18
Nup88-203ENSMUST00000108531 Ctnna2Q61301 953 aa13.92□□□□□ -0.18
Nup88-203ENSMUST00000108531 Churc1Q6DG52 112 aa13.92□□□□□ -0.18
Nup88-203ENSMUST00000108531 Q922C1 641 aa13.92□□□□□ -0.18
Nup88-203ENSMUST00000108531 Ttc6G3UYY4 1857 aa13.92□□□□□ -0.18
Nup88-203ENSMUST00000108531 Serpinb8O08800 374 aaKnown RBP13.91□□□□□ -0.18
Nup88-203ENSMUST00000108531 Cyth3O08967 399 aa13.91□□□□□ -0.18
Nup88-203ENSMUST00000108531 Slc3a2P10852 526 aaKnown RBP13.91□□□□□ -0.18
Nup88-203ENSMUST00000108531 Pik3caP42337 1068 aa13.91□□□□□ -0.18
Nup88-203ENSMUST00000108531 Lig3P97386 1015 aa13.91□□□□□ -0.18
Nup88-203ENSMUST00000108531 Gja5Q01231 358 aa13.91□□□□□ -0.18
Nup88-203ENSMUST00000108531 Vwa3aQ3UVV9 1148 aa13.91□□□□□ -0.18
Nup88-203ENSMUST00000108531 Gm10488Q4KL05 212 aa13.91□□□□□ -0.18
Nup88-203ENSMUST00000108531 Dlg4Q62108 724 aa13.91□□□□□ -0.18
Nup88-203ENSMUST00000108531 Ddx31Q6NZQ2 687 aaKnown RBP13.91□□□□□ -0.18
Nup88-203ENSMUST00000108531 Ints8Q80V86 995 aa13.91□□□□□ -0.18
Nup88-203ENSMUST00000108531 Slc9a9Q8BZ00 644 aa13.91□□□□□ -0.18
Nup88-203ENSMUST00000108531 Usp20Q8C6M1 916 aa13.91□□□□□ -0.18
Nup88-203ENSMUST00000108531 Vps36Q91XD6 386 aa13.91□□□□□ -0.18
Nup88-203ENSMUST00000108531 Gimap4Q99JY3 219 aa13.91□□□□□ -0.18
Nup88-203ENSMUST00000108531 Serpina9Q9D7D2 418 aa13.91□□□□□ -0.18
Nup88-203ENSMUST00000108531 Tlr5Q9JLF7 859 aa13.91□□□□□ -0.18
Nup88-203ENSMUST00000108531 Gm45194A0A140LJG2 572 aa13.91□□□□□ -0.18
Nup88-203ENSMUST00000108531 C87977A2A958 498 aa13.91□□□□□ -0.18
Nup88-203ENSMUST00000108531 Gm4297D3YWB7 211 aa13.91□□□□□ -0.18
Nup88-203ENSMUST00000108531 Exoc4O35382 975 aa13.91□□□□□ -0.18
Nup88-203ENSMUST00000108531 AaasP58742 546 aa13.91□□□□□ -0.18
Nup88-203ENSMUST00000108531 Cyp11b1Q3TG86 501 aa13.91□□□□□ -0.18
Nup88-203ENSMUST00000108531 Mier3Q3UHF3 551 aa13.91□□□□□ -0.18
Nup88-203ENSMUST00000108531 P4ha1Q60715 534 aa13.91□□□□□ -0.18
Nup88-203ENSMUST00000108531 Btnl9Q8BJE2 536 aa13.91□□□□□ -0.18
Nup88-203ENSMUST00000108531 Fsd1lQ8BYN5 507 aa13.91□□□□□ -0.18
Nup88-203ENSMUST00000108531 Pkn3Q8K045 878 aa13.91□□□□□ -0.18
Nup88-203ENSMUST00000108531 Bst2Q8R2Q8 172 aa13.91□□□□□ -0.18
Nup88-203ENSMUST00000108531 Mis12Q9CY25 206 aa13.91□□□□□ -0.18
Nup88-203ENSMUST00000108531 Xab2Q9DCD2 855 aaKnown RBP13.91□□□□□ -0.18
Nup88-203ENSMUST00000108531 Slc15a2Q9ES07 729 aa13.91□□□□□ -0.18
Nup88-203ENSMUST00000108531 Cfap221A9Q751 836 aa13.9□□□□□ -0.18
Nup88-203ENSMUST00000108531 Cdk14O35495 469 aa13.9□□□□□ -0.18
Nup88-203ENSMUST00000108531 ArP19091 899 aa13.9□□□□□ -0.18
Nup88-203ENSMUST00000108531 Slc1a1P51906 523 aa13.9□□□□□ -0.18
Nup88-203ENSMUST00000108531 Ppp3caP63328 521 aa13.9□□□□□ -0.18
Nup88-203ENSMUST00000108531 SpertQ32MG2 446 aa13.9□□□□□ -0.18
Nup88-203ENSMUST00000108531 Kctd19Q562E2 927 aa13.9□□□□□ -0.18
Nup88-203ENSMUST00000108531 Ctc1Q5SUQ9 1212 aa13.9□□□□□ -0.18
Nup88-203ENSMUST00000108531 Large2Q5XPT3 690 aa13.9□□□□□ -0.18
Nup88-203ENSMUST00000108531 A1cfQ5YD48 595 aa13.9□□□□□ -0.18
Nup88-203ENSMUST00000108531 Cnot7Q60809 285 aa13.9□□□□□ -0.18
Nup88-203ENSMUST00000108531 Tshz2Q68FE9 1030 aa13.9□□□□□ -0.18
Nup88-203ENSMUST00000108531 Inpp4bQ6P1Y8 924 aa13.9□□□□□ -0.18
Nup88-203ENSMUST00000108531 Brd2Q7JJ13 798 aaKnown RBP13.9□□□□□ -0.18
Nup88-203ENSMUST00000108531 L3mbtl3Q8BLB7 883 aa13.9□□□□□ -0.18
Nup88-203ENSMUST00000108531 Aldh5a1Q8BWF0 523 aa13.9□□□□□ -0.18
Nup88-203ENSMUST00000108531 Rapgef5Q8C0Q9 814 aa13.9□□□□□ -0.18
Nup88-203ENSMUST00000108531 Kcnv2Q8CFS6 562 aa13.9□□□□□ -0.18
Nup88-203ENSMUST00000108531 Champ1Q8K327 802 aaKnown RBP13.9□□□□□ -0.18
Nup88-203ENSMUST00000108531 Trpm8Q8R4D5 1104 aa13.9□□□□□ -0.18
Nup88-203ENSMUST00000108531 Ccdc65Q8VHI7 493 aa13.9□□□□□ -0.18
Nup88-203ENSMUST00000108531 Trex1Q91XB0 314 aa13.9□□□□□ -0.18
Nup88-203ENSMUST00000108531 Asb11Q9CQ31 323 aa13.9□□□□□ -0.18
Nup88-203ENSMUST00000108531 Prl2b1Q9DAZ2 228 aa13.9□□□□□ -0.18
Nup88-203ENSMUST00000108531 Rnf103Q9R1W3 683 aa13.9□□□□□ -0.18
Nup88-203ENSMUST00000108531 Mms22lB1AUR6 1238 aa13.9□□□□□ -0.18
Nup88-203ENSMUST00000108531 Pex5O09012 639 aa13.9□□□□□ -0.18
Nup88-203ENSMUST00000108531 Krt8P11679 490 aaKnown RBP13.9□□□□□ -0.18
Nup88-203ENSMUST00000108531 Pik3r1P26450 724 aa13.9□□□□□ -0.18
Nup88-203ENSMUST00000108531 Mtus1Q5HZI1 1210 aa13.9□□□□□ -0.18
Nup88-203ENSMUST00000108531 Atp13a3Q5XF89 1219 aa13.9□□□□□ -0.18
Nup88-203ENSMUST00000108531 Vgll2Q8BGW8 322 aa13.9□□□□□ -0.18
Nup88-203ENSMUST00000108531 Bicd1Q8BR07 835 aa13.9□□□□□ -0.18
Nup88-203ENSMUST00000108531 Rccd1Q8BTU7 377 aa13.9□□□□□ -0.18
Nup88-203ENSMUST00000108531 Apol9bQ8C7I4 310 aa13.9□□□□□ -0.18
Nup88-203ENSMUST00000108531 Znf830Q8R1N0 363 aaKnown RBP13.9□□□□□ -0.18
Nup88-203ENSMUST00000108531 Apol9aQ8VDU3 310 aa13.9□□□□□ -0.18
Nup88-203ENSMUST00000108531 Med24Q99K74 987 aa13.9□□□□□ -0.18
Retrieved 100 of 22,080 RNA–protein pairs in 71 ms