RNA–Protein interactions for RNA: ENST00000641272.1

PHGDH-213, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-213ENST00000641272 CEP89Q96ST8 783 aa18.77■□□□□ 0.6
PHGDH-213ENST00000641272 GCOM2Q9BZD3 368 aaPredicted RBP18.77■□□□□ 0.6
PHGDH-213ENST00000641272 CYP3A7-CYP3A51PA0A087WV96 503 aa18.76■□□□□ 0.59
PHGDH-213ENST00000641272 CCDC194A0A1B0GVG4 234 aa18.76■□□□□ 0.59
PHGDH-213ENST00000641272 CYP3A7P24462 503 aa18.76■□□□□ 0.59
PHGDH-213ENST00000641272 PPM1AP35813 382 aa18.76■□□□□ 0.59
PHGDH-213ENST00000641272 PLCB3Q01970 1234 aa18.76■□□□□ 0.59
PHGDH-213ENST00000641272 TWF2Q6IBS0 349 aaKnown RBP18.76■□□□□ 0.59
PHGDH-213ENST00000641272 FAM43BQ6ZT52 329 aaPredicted RBP18.76■□□□□ 0.59
PHGDH-213ENST00000641272 TMC7Q7Z402 723 aa18.76■□□□□ 0.59
PHGDH-213ENST00000641272 MBOAT7Q96N66 472 aa18.76■□□□□ 0.59
PHGDH-213ENST00000641272 CDCA3Q99618 268 aaPredicted RBP18.76■□□□□ 0.59
PHGDH-213ENST00000641272 TM6SF1Q9BZW5 370 aa18.76■□□□□ 0.59
PHGDH-213ENST00000641272 SPG21Q9NZD8 308 aa18.76■□□□□ 0.59
PHGDH-213ENST00000641272 SUCLA2Q9P2R7 463 aaPredicted RBP18.76■□□□□ 0.59
PHGDH-213ENST00000641272 PUF60Q9UHX1 559 aaKnown RBP18.76■□□□□ 0.59
PHGDH-213ENST00000641272 LZTS1Q9Y250 596 aa18.76■□□□□ 0.59
PHGDH-213ENST00000641272 INPP5FQ9Y2H2 1132 aa18.76■□□□□ 0.59
PHGDH-213ENST00000641272 ARIH1Q9Y4X5 557 aaPredicted RBP18.76■□□□□ 0.59
PHGDH-213ENST00000641272 ZNF318Q5VUA4 2279 aa18.76■□□□□ 0.59
PHGDH-213ENST00000641272 A0A0U1RQF3 1178 aa18.75■□□□□ 0.59
PHGDH-213ENST00000641272 MEIS3P2A8K0S8 358 aa18.75■□□□□ 0.59
PHGDH-213ENST00000641272 LOC730098B7Z3J9 87 aa18.75■□□□□ 0.59
PHGDH-213ENST00000641272 ZC3H11AO75152 810 aaKnown RBP eCLIP18.75■□□□□ 0.59
PHGDH-213ENST00000641272 SFPQP23246 707 aaKnown RBP eCLIP18.75■□□□□ 0.59
PHGDH-213ENST00000641272 NPEPPSP55786 919 aa18.75■□□□□ 0.59
PHGDH-213ENST00000641272 MOXD1Q6UVY6 613 aa18.75■□□□□ 0.59
PHGDH-213ENST00000641272 ANO5Q75V66 913 aa18.75■□□□□ 0.59
PHGDH-213ENST00000641272 SLC39A11Q8N1S5 342 aa18.75■□□□□ 0.59
PHGDH-213ENST00000641272 OXER1Q8TDS5 423 aa18.75■□□□□ 0.59
PHGDH-213ENST00000641272 PHF20Q9BVI0 1012 aa18.75■□□□□ 0.59
PHGDH-213ENST00000641272 PHF7Q9BWX1 381 aaPredicted RBP18.75■□□□□ 0.59
PHGDH-213ENST00000641272 NIFKQ9BYG3 293 aaKnown RBP18.75■□□□□ 0.59
PHGDH-213ENST00000641272 DACT1Q9NYF0 836 aa18.75■□□□□ 0.59
PHGDH-213ENST00000641272 WRAP73Q9P2S5 460 aaPredicted RBP18.75■□□□□ 0.59
PHGDH-213ENST00000641272 VAV3Q9UKW4 847 aa18.75■□□□□ 0.59
PHGDH-213ENST00000641272 IGKV6-21A0A0C4DH24 114 aa18.74■□□□□ 0.59
PHGDH-213ENST00000641272 FAM205CA6NFA0 338 aa18.74■□□□□ 0.59
PHGDH-213ENST00000641272 SRGAP2BP0DMP2 458 aa18.74■□□□□ 0.59
PHGDH-213ENST00000641272 DNM2P50570 870 aa18.74■□□□□ 0.59
PHGDH-213ENST00000641272 BCAR1P56945 870 aa18.74■□□□□ 0.59
PHGDH-213ENST00000641272 PSMC5P62195 406 aa18.74■□□□□ 0.59
PHGDH-213ENST00000641272 PDE12Q6L8Q7 609 aaKnown RBP18.74■□□□□ 0.59
PHGDH-213ENST00000641272 ANKRD54Q6NXT1 300 aa18.74■□□□□ 0.59
PHGDH-213ENST00000641272 PIK3AP1Q6ZUJ8 805 aa18.74■□□□□ 0.59
PHGDH-213ENST00000641272 CATSPER4Q7RTX7 472 aa18.74■□□□□ 0.59
PHGDH-213ENST00000641272 TMEM173Q86WV6 379 aaPredicted RBP18.74■□□□□ 0.59
PHGDH-213ENST00000641272 POTEDQ86YR6 584 aa18.74■□□□□ 0.59
PHGDH-213ENST00000641272 ZNF579Q8NAF0 562 aaKnown RBP18.74■□□□□ 0.59
PHGDH-213ENST00000641272 MRPL9Q9BYD2 267 aaKnown RBP18.74■□□□□ 0.59
PHGDH-213ENST00000641272 SLKQ9H2G2 1235 aaPredicted RBP18.74■□□□□ 0.59
PHGDH-213ENST00000641272 STK36Q9NRP7 1315 aa18.74■□□□□ 0.59
PHGDH-213ENST00000641272 KMT2EQ8IZD2 1858 aa18.73■□□□□ 0.59
PHGDH-213ENST00000641272 EPB41L2O43491 1005 aaKnown RBP18.73■□□□□ 0.59
PHGDH-213ENST00000641272 CCNT1O60563 726 aaKnown RBP18.73■□□□□ 0.59
PHGDH-213ENST00000641272 CDKL5O76039 1030 aa18.73■□□□□ 0.59
PHGDH-213ENST00000641272 PHKA2P46019 1235 aa18.73■□□□□ 0.59
PHGDH-213ENST00000641272 FOSBP53539 338 aa18.73■□□□□ 0.59
PHGDH-213ENST00000641272 KRT17Q04695 432 aa18.73■□□□□ 0.59
PHGDH-213ENST00000641272 SMC1AQ14683 1233 aaKnown RBP18.73■□□□□ 0.59
PHGDH-213ENST00000641272 CBX2Q14781 532 aaPredicted RBP18.73■□□□□ 0.59
PHGDH-213ENST00000641272 EARS2Q5JPH6 523 aaKnown RBP18.73■□□□□ 0.59
PHGDH-213ENST00000641272 NCAPH2Q6IBW4 605 aa18.73■□□□□ 0.59
PHGDH-213ENST00000641272 GALNT17Q6IS24 598 aa18.73■□□□□ 0.59
PHGDH-213ENST00000641272 SYCE2Q6PIF2 218 aa18.73■□□□□ 0.59
PHGDH-213ENST00000641272 NEK8Q86SG6 692 aa18.73■□□□□ 0.59
PHGDH-213ENST00000641272 ZNF710Q8N1W2 664 aa18.73■□□□□ 0.59
PHGDH-213ENST00000641272 AUTS2Q8WXX7 1259 aa18.73■□□□□ 0.59
PHGDH-213ENST00000641272 SUSD6Q92537 303 aa18.73■□□□□ 0.59
PHGDH-213ENST00000641272 EDAQ92838 391 aa18.73■□□□□ 0.59
PHGDH-213ENST00000641272 GBP3Q9H0R5 595 aa18.73■□□□□ 0.59
PHGDH-213ENST00000641272 TPCN1Q9ULQ1 816 aa18.73■□□□□ 0.59
PHGDH-213ENST00000641272 FSD2A1L4K1 749 aa18.72■□□□□ 0.59
PHGDH-213ENST00000641272 MAFO75444 373 aaPredicted RBP18.72■□□□□ 0.59
PHGDH-213ENST00000641272 POLGP54098 1239 aaPredicted RBP18.72■□□□□ 0.59
PHGDH-213ENST00000641272 KCNC3Q14003 757 aa18.72■□□□□ 0.59
PHGDH-213ENST00000641272 ZNF410Q86VK4 478 aa18.72■□□□□ 0.59
PHGDH-213ENST00000641272 BCL7CQ8WUZ0 217 aaPredicted RBP18.72■□□□□ 0.59
PHGDH-213ENST00000641272 TMEM169Q96HH4 297 aa18.72■□□□□ 0.59
PHGDH-213ENST00000641272 FBXL18Q96ME1 805 aa18.72■□□□□ 0.59
PHGDH-213ENST00000641272 LXNQ9BS40 222 aa18.72■□□□□ 0.59
PHGDH-213ENST00000641272 KCNMB3Q9NPA1 279 aa18.72■□□□□ 0.59
PHGDH-213ENST00000641272 NGRNQ9NPE2 291 aaKnown RBP18.72■□□□□ 0.59
PHGDH-213ENST00000641272 CYP26B1Q9NR63 512 aa18.72■□□□□ 0.59
PHGDH-213ENST00000641272 TSHZ2Q9NRE2 1034 aa18.72■□□□□ 0.59
PHGDH-213ENST00000641272 COL4A3BPQ9Y5P4 624 aa18.72■□□□□ 0.59
PHGDH-213ENST00000641272 HCFC2Q9Y5Z7 792 aa18.72■□□□□ 0.59
PHGDH-213ENST00000641272 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.71■□□□□ 0.59
PHGDH-213ENST00000641272 TMEM221A6NGB7 291 aa18.71■□□□□ 0.59
PHGDH-213ENST00000641272 M0R296 226 aa18.71■□□□□ 0.59
PHGDH-213ENST00000641272 B4GALT3O60512 393 aa18.71■□□□□ 0.59
PHGDH-213ENST00000641272 EOMESO95936 686 aa18.71■□□□□ 0.59
PHGDH-213ENST00000641272 QARSP47897 775 aaKnown RBP18.71■□□□□ 0.59
PHGDH-213ENST00000641272 CYP4A11Q02928 519 aa18.71■□□□□ 0.59
PHGDH-213ENST00000641272 PPP2R5CQ13362 524 aa18.71■□□□□ 0.59
PHGDH-213ENST00000641272 ALYREFQ86V81 257 aaKnown RBP18.71■□□□□ 0.59
PHGDH-213ENST00000641272 TMEM143Q96AN5 459 aa18.71■□□□□ 0.59
PHGDH-213ENST00000641272 CEP170P1Q96L14 293 aa18.71■□□□□ 0.59
PHGDH-213ENST00000641272 S1PR5Q9H228 398 aa18.71■□□□□ 0.59
PHGDH-213ENST00000641272 FAM105AQ9NUU6 356 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 106.8 ms