RNA–Protein interactions for RNA: ENST00000639487.1

RTTN-215, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 3,175 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-215ENST00000639487 RMDN3Q96TC7 470 aa7.24□□□□□ -1.25
RTTN-215ENST00000639487 UNC45AQ9H3U1 944 aa7.24□□□□□ -1.25
RTTN-215ENST00000639487 DZANK1Q9NVP4 752 aa7.24□□□□□ -1.25
RTTN-215ENST00000639487 GEMIN8Q9NWZ8 242 aaKnown RBP7.24□□□□□ -1.25
RTTN-215ENST00000639487 STOML2Q9UJZ1 356 aa7.24□□□□□ -1.25
RTTN-215ENST00000639487 PCDH15Q96QU1 1955 aa7.23□□□□□ -1.25
RTTN-215ENST00000639487 BTNL10A8MVZ5 291 aa7.23□□□□□ -1.25
RTTN-215ENST00000639487 LARGE1O95461 756 aa7.23□□□□□ -1.25
RTTN-215ENST00000639487 LDHAP00338 332 aaKnown RBP7.23□□□□□ -1.25
RTTN-215ENST00000639487 SLFN14P0C7P3 912 aa7.23□□□□□ -1.25
RTTN-215ENST00000639487 CDC25BP30305 580 aa7.23□□□□□ -1.25
RTTN-215ENST00000639487 RBM5P52756 815 aaKnown RBP eCLIP7.23□□□□□ -1.25
RTTN-215ENST00000639487 HADHBP55084 474 aaKnown RBP7.23□□□□□ -1.25
RTTN-215ENST00000639487 ACTR2P61160 394 aa7.23□□□□□ -1.25
RTTN-215ENST00000639487 LRRC63Q05C16 580 aa7.23□□□□□ -1.25
RTTN-215ENST00000639487 DPYDQ12882 1025 aa7.23□□□□□ -1.25
RTTN-215ENST00000639487 SNW1Q13573 536 aaKnown RBP7.23□□□□□ -1.25
RTTN-215ENST00000639487 C5orf22Q49AR2 442 aa7.23□□□□□ -1.25
RTTN-215ENST00000639487 TTC38Q5R3I4 469 aa7.23□□□□□ -1.25
RTTN-215ENST00000639487 UBXN11Q5T124 520 aa7.23□□□□□ -1.25
RTTN-215ENST00000639487 TAF3Q5VWG9 929 aa7.23□□□□□ -1.25
RTTN-215ENST00000639487 ZBTB9Q96C00 473 aa7.23□□□□□ -1.25
RTTN-215ENST00000639487 ZIC5Q96T25 663 aa7.23□□□□□ -1.25
RTTN-215ENST00000639487 TMEM206Q9H813 350 aa7.23□□□□□ -1.25
RTTN-215ENST00000639487 SPC25Q9HBM1 224 aa7.23□□□□□ -1.25
RTTN-215ENST00000639487 KCNH3Q9ULD8 1083 aa7.23□□□□□ -1.25
RTTN-215ENST00000639487 ABT1Q9ULW3 272 aaKnown RBP7.23□□□□□ -1.25
RTTN-215ENST00000639487 KBTBD13C9JR72 458 aa7.23□□□□□ -1.25
RTTN-215ENST00000639487 GFRA2O00451 464 aa7.23□□□□□ -1.25
RTTN-215ENST00000639487 STX6O43752 255 aa7.23□□□□□ -1.25
RTTN-215ENST00000639487 STX10O60499 249 aa7.23□□□□□ -1.25
RTTN-215ENST00000639487 NEMFO60524 1076 aa7.23□□□□□ -1.25
RTTN-215ENST00000639487 SEC24BO95487 1268 aa7.23□□□□□ -1.25
RTTN-215ENST00000639487 PLS3P13797 630 aa7.23□□□□□ -1.25
RTTN-215ENST00000639487 HTR7P34969 479 aa7.23□□□□□ -1.25
RTTN-215ENST00000639487 GPC3P51654 580 aa7.23□□□□□ -1.25
RTTN-215ENST00000639487 TFDP1Q14186 410 aa7.23□□□□□ -1.25
RTTN-215ENST00000639487 CCDC144BQ3MJ40 725 aa7.23□□□□□ -1.25
RTTN-215ENST00000639487 ANO1Q5XXA6 986 aa7.23□□□□□ -1.25
RTTN-215ENST00000639487 SLFN12LQ6IEE8 588 aa7.23□□□□□ -1.25
RTTN-215ENST00000639487 TTBK2Q6IQ55 1244 aa7.23□□□□□ -1.25
RTTN-215ENST00000639487 GUF1Q8N442 669 aaKnown RBP7.23□□□□□ -1.25
RTTN-215ENST00000639487 NELL1Q92832 810 aa7.23□□□□□ -1.25
RTTN-215ENST00000639487 BRF1Q92994 677 aa7.23□□□□□ -1.25
RTTN-215ENST00000639487 ALG1Q9BT22 464 aa7.23□□□□□ -1.25
RTTN-215ENST00000639487 DISC1Q9NRI5 854 aa7.23□□□□□ -1.25
RTTN-215ENST00000639487 C17orf102A2RUQ5 167 aa7.22□□□□□ -1.25
RTTN-215ENST00000639487 PDXKO00764 312 aa7.22□□□□□ -1.25
RTTN-215ENST00000639487 SYN3O14994 580 aa7.22□□□□□ -1.25
RTTN-215ENST00000639487 KIF20AO95235 890 aa7.22□□□□□ -1.25
RTTN-215ENST00000639487 IQCF3P0C7M6 154 aa7.22□□□□□ -1.25
RTTN-215ENST00000639487 DARSP14868 501 aaKnown RBP7.22□□□□□ -1.25
RTTN-215ENST00000639487 LIG1P18858 919 aa7.22□□□□□ -1.25
RTTN-215ENST00000639487 DDX6P26196 483 aaKnown RBP eCLIP7.22□□□□□ -1.25
RTTN-215ENST00000639487 HNRNPH3P31942 346 aaKnown RBP7.22□□□□□ -1.25
RTTN-215ENST00000639487 RARRES1P49788 294 aa7.22□□□□□ -1.25
RTTN-215ENST00000639487 INCA1Q0VD86 236 aa7.22□□□□□ -1.25
RTTN-215ENST00000639487 FAM47AQ5JRC9 791 aa7.22□□□□□ -1.25
RTTN-215ENST00000639487 SARM1Q6SZW1 724 aa7.22□□□□□ -1.25
RTTN-215ENST00000639487 BMP8AQ7Z5Y6 402 aa7.22□□□□□ -1.25
RTTN-215ENST00000639487 ZDHHC14Q8IZN3 488 aa7.22□□□□□ -1.25
RTTN-215ENST00000639487 RNF217Q8TC41 542 aa7.22□□□□□ -1.25
RTTN-215ENST00000639487 DHTKD1Q96HY7 919 aaPredicted RBP7.22□□□□□ -1.25
RTTN-215ENST00000639487 SPATA17Q96L03 361 aa7.22□□□□□ -1.25
RTTN-215ENST00000639487 CCDC85AQ96PX6 553 aaPredicted RBP7.22□□□□□ -1.25
RTTN-215ENST00000639487 OSBPL6Q9BZF3 934 aa7.22□□□□□ -1.25
RTTN-215ENST00000639487 KCTD10Q9H3F6 313 aa7.22□□□□□ -1.25
RTTN-215ENST00000639487 RYDENQ9NUL5 291 aaKnown RBP7.22□□□□□ -1.25
RTTN-215ENST00000639487 RMND1Q9NWS8 449 aa7.22□□□□□ -1.25
RTTN-215ENST00000639487 TPX2Q9ULW0 747 aaKnown RBP7.22□□□□□ -1.25
RTTN-215ENST00000639487 CNPY2Q9Y2B0 182 aa7.22□□□□□ -1.25
RTTN-215ENST00000639487 IVNS1ABPQ9Y6Y0 642 aa7.22□□□□□ -1.25
RTTN-215ENST00000639487 A0A1W2PQJ5 194 aa7.22□□□□□ -1.25
RTTN-215ENST00000639487 SPDYE3A6NKU9 549 aa7.22□□□□□ -1.25
RTTN-215ENST00000639487 CHGBP05060 677 aa7.22□□□□□ -1.25
RTTN-215ENST00000639487 TPM2P07951 284 aa7.22□□□□□ -1.25
RTTN-215ENST00000639487 ATP2B2Q01814 1243 aa7.22□□□□□ -1.25
RTTN-215ENST00000639487 APOBRQ0VD83 1088 aa7.22□□□□□ -1.25
RTTN-215ENST00000639487 FERMT3Q86UX7 667 aa7.22□□□□□ -1.25
RTTN-215ENST00000639487 SLC22A17Q8WUG5 538 aa7.22□□□□□ -1.25
RTTN-215ENST00000639487 PPP1R10Q96QC0 940 aaKnown RBP7.22□□□□□ -1.25
RTTN-215ENST00000639487 IFT122Q9HBG6 1241 aa7.22□□□□□ -1.25
RTTN-215ENST00000639487 CYP26B1Q9NR63 512 aa7.22□□□□□ -1.25
RTTN-215ENST00000639487 A0A0A0MRY4 1105 aa7.22□□□□□ -1.25
RTTN-215ENST00000639487 IPO5O00410 1097 aaKnown RBP7.22□□□□□ -1.25
RTTN-215ENST00000639487 NMT2O60551 498 aa7.22□□□□□ -1.25
RTTN-215ENST00000639487 SMIM10L2AP0DMW4 78 aa7.22□□□□□ -1.25
RTTN-215ENST00000639487 SMIM10L2BP0DMW5 78 aa7.22□□□□□ -1.25
RTTN-215ENST00000639487 CENPPQ6IPU0 288 aa7.22□□□□□ -1.25
RTTN-215ENST00000639487 SUGP1Q8IWZ8 645 aaKnown RBP7.22□□□□□ -1.25
RTTN-215ENST00000639487 KCNV2Q8TDN2 545 aa7.22□□□□□ -1.25
RTTN-215ENST00000639487 DDX27Q96GQ7 796 aaKnown RBP7.22□□□□□ -1.25
RTTN-215ENST00000639487 YY1AP1Q9H869 796 aa7.22□□□□□ -1.25
RTTN-215ENST00000639487 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.22□□□□□ -1.25
RTTN-215ENST00000639487 ACKR2O00590 384 aa7.21□□□□□ -1.25
RTTN-215ENST00000639487 GPR182O15218 404 aa7.21□□□□□ -1.25
RTTN-215ENST00000639487 PRKAR2AP13861 404 aaKnown RBP7.21□□□□□ -1.25
RTTN-215ENST00000639487 TMEM266Q2M3C6 531 aa7.21□□□□□ -1.25
RTTN-215ENST00000639487 SKOR2Q2VWA4 1001 aaPredicted RBP7.21□□□□□ -1.25
RTTN-215ENST00000639487 UVSSAQ2YD98 709 aa7.21□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms