RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 TRIM49P0CI25 452 aa21.5■■□□□ 1.03
PCDHB11-202ENST00000624887 TRIM49CP0CI26 452 aa21.5■■□□□ 1.03
PCDHB11-202ENST00000624887 TCP1P17987 556 aaKnown RBP21.5■■□□□ 1.03
PCDHB11-202ENST00000624887 INTS8Q75QN2 995 aaKnown RBP21.5■■□□□ 1.03
PCDHB11-202ENST00000624887 CREG2Q8IUH2 290 aa21.5■■□□□ 1.03
PCDHB11-202ENST00000624887 GPRC5CQ9NQ84 441 aa21.5■■□□□ 1.03
PCDHB11-202ENST00000624887 DAAM1Q9Y4D1 1078 aa21.5■■□□□ 1.03
PCDHB11-202ENST00000624887 HYOU1Q9Y4L1 999 aa21.5■■□□□ 1.03
PCDHB11-202ENST00000624887 BTNL10A8MVZ5 291 aa21.49■■□□□ 1.03
PCDHB11-202ENST00000624887 PDE2AO00408 941 aaPredicted RBP21.49■■□□□ 1.03
PCDHB11-202ENST00000624887 KLRC1P26715 233 aa21.49■■□□□ 1.03
PCDHB11-202ENST00000624887 PEX3P56589 373 aa21.49■■□□□ 1.03
PCDHB11-202ENST00000624887 PRKG1Q13976 671 aa21.49■■□□□ 1.03
PCDHB11-202ENST00000624887 DPY19L2Q6NUT2 758 aa21.49■■□□□ 1.03
PCDHB11-202ENST00000624887 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.49■■□□□ 1.03
PCDHB11-202ENST00000624887 CAGE1Q8TC20 777 aa21.49■■□□□ 1.03
PCDHB11-202ENST00000624887 OSBPL9Q96SU4 736 aa21.49■■□□□ 1.03
PCDHB11-202ENST00000624887 STK33Q9BYT3 514 aa21.49■■□□□ 1.03
PCDHB11-202ENST00000624887 SNCAIPQ9Y6H5 919 aa21.49■■□□□ 1.03
PCDHB11-202ENST00000624887 DKC1O60832 514 aaKnown RBP eCLIP21.48■■□□□ 1.03
PCDHB11-202ENST00000624887 KRT13P13646 458 aa21.48■■□□□ 1.03
PCDHB11-202ENST00000624887 FERP16591 822 aa21.48■■□□□ 1.03
PCDHB11-202ENST00000624887 STAT1P42224 750 aa21.48■■□□□ 1.03
PCDHB11-202ENST00000624887 NAP1L1P55209 391 aaKnown RBP21.48■■□□□ 1.03
PCDHB11-202ENST00000624887 MYL7Q01449 175 aa21.48■■□□□ 1.03
PCDHB11-202ENST00000624887 LONRF2Q1L5Z9 754 aa21.48■■□□□ 1.03
PCDHB11-202ENST00000624887 FAM102BQ5T8I3 360 aa21.48■■□□□ 1.03
PCDHB11-202ENST00000624887 WDR93Q6P2C0 686 aa21.48■■□□□ 1.03
PCDHB11-202ENST00000624887 OTUD6AQ7L8S5 288 aa21.48■■□□□ 1.03
PCDHB11-202ENST00000624887 TRMT1LQ7Z2T5 733 aaKnown RBP21.48■■□□□ 1.03
PCDHB11-202ENST00000624887 ZNF572Q7Z3I7 529 aaPredicted RBP21.48■■□□□ 1.03
PCDHB11-202ENST00000624887 RDH13Q8NBN7 331 aa21.48■■□□□ 1.03
PCDHB11-202ENST00000624887 ATP6V0A1Q93050 837 aa21.48■■□□□ 1.03
PCDHB11-202ENST00000624887 GABBR1Q9UBS5 961 aa21.48■■□□□ 1.03
PCDHB11-202ENST00000624887 TSKSQ9UJT2 592 aa21.48■■□□□ 1.03
PCDHB11-202ENST00000624887 NAGPAQ9UK23 515 aa21.48■■□□□ 1.03
PCDHB11-202ENST00000624887 ATP8B3O60423 1300 aa21.48■■□□□ 1.03
PCDHB11-202ENST00000624887 TISP43B9A030 160 aa21.48■■□□□ 1.03
PCDHB11-202ENST00000624887 SLC16A4O15374 487 aa21.48■■□□□ 1.03
PCDHB11-202ENST00000624887 ERLIN1O75477 346 aa21.48■■□□□ 1.03
PCDHB11-202ENST00000624887 VSNL1P62760 191 aa21.48■■□□□ 1.03
PCDHB11-202ENST00000624887 VGLL4Q14135 290 aa21.48■■□□□ 1.03
PCDHB11-202ENST00000624887 CBWD1Q9BRT8 395 aa21.48■■□□□ 1.03
PCDHB11-202ENST00000624887 TLR10Q9BXR5 811 aa21.48■■□□□ 1.03
PCDHB11-202ENST00000624887 PACSIN1Q9BY11 444 aa21.48■■□□□ 1.03
PCDHB11-202ENST00000624887 INTS2Q9H0H0 1204 aaKnown RBP21.48■■□□□ 1.03
PCDHB11-202ENST00000624887 PCIF1Q9H4Z3 704 aa21.48■■□□□ 1.03
PCDHB11-202ENST00000624887 JPH1Q9HDC5 661 aaPredicted RBP21.48■■□□□ 1.03
PCDHB11-202ENST00000624887 NENFQ9UMX5 172 aa21.48■■□□□ 1.03
PCDHB11-202ENST00000624887 PCDHGC5Q9Y5F6 944 aa21.48■■□□□ 1.03
PCDHB11-202ENST00000624887 LCTP09848 1927 aa21.47■■□□□ 1.03
PCDHB11-202ENST00000624887 F8VZ95 297 aa21.47■■□□□ 1.03
PCDHB11-202ENST00000624887 MAPK13O15264 365 aa21.47■■□□□ 1.03
PCDHB11-202ENST00000624887 ZNF862O60290 1169 aa21.47■■□□□ 1.03
PCDHB11-202ENST00000624887 SASH3O75995 380 aa21.47■■□□□ 1.03
PCDHB11-202ENST00000624887 STBD1O95210 358 aa21.47■■□□□ 1.03
PCDHB11-202ENST00000624887 PSAPP07602 524 aa21.47■■□□□ 1.03
PCDHB11-202ENST00000624887 ITIH3Q06033 890 aa21.47■■□□□ 1.03
PCDHB11-202ENST00000624887 GPR162Q16538 588 aa21.47■■□□□ 1.03
PCDHB11-202ENST00000624887 GNPTABQ3T906 1256 aa21.47■■□□□ 1.03
PCDHB11-202ENST00000624887 BEND6Q5SZJ8 279 aaPredicted RBP21.47■■□□□ 1.03
PCDHB11-202ENST00000624887 VPS36Q86VN1 386 aa21.47■■□□□ 1.03
PCDHB11-202ENST00000624887 XXYLT1Q8NBI6 393 aa21.47■■□□□ 1.03
PCDHB11-202ENST00000624887 COG1Q8WTW3 980 aa21.47■■□□□ 1.03
PCDHB11-202ENST00000624887 FUT8Q9BYC5 575 aa21.47■■□□□ 1.03
PCDHB11-202ENST00000624887 HSPBP1Q9NZL4 362 aa21.47■■□□□ 1.03
PCDHB11-202ENST00000624887 APEX2Q9UBZ4 518 aa21.47■■□□□ 1.03
PCDHB11-202ENST00000624887 PTPRFP10586 1907 aa21.47■■□□□ 1.03
PCDHB11-202ENST00000624887 SPATA31C2B4DYI2 1134 aa21.47■■□□□ 1.03
PCDHB11-202ENST00000624887 SOX5P35711 763 aa21.47■■□□□ 1.03
PCDHB11-202ENST00000624887 PLA2G4AP47712 749 aa21.47■■□□□ 1.03
PCDHB11-202ENST00000624887 SMTNP53814 917 aa21.47■■□□□ 1.03
PCDHB11-202ENST00000624887 NFRKBQ6P4R8 1299 aa21.47■■□□□ 1.03
PCDHB11-202ENST00000624887 ALKBH5Q6P6C2 394 aaKnown RBP21.47■■□□□ 1.03
PCDHB11-202ENST00000624887 CHST13Q8NET6 341 aa21.47■■□□□ 1.03
PCDHB11-202ENST00000624887 HVCN1Q96D96 273 aa21.47■■□□□ 1.03
PCDHB11-202ENST00000624887 SLC9A2Q9UBY0 812 aa21.47■■□□□ 1.03
PCDHB11-202ENST00000624887 DNAJC12Q9UKB3 198 aa21.47■■□□□ 1.03
PCDHB11-202ENST00000624887 ARID2Q68CP9 1835 aa21.46■■□□□ 1.03
PCDHB11-202ENST00000624887 PALMO75781 387 aa21.46■■□□□ 1.03
PCDHB11-202ENST00000624887 GFPT2O94808 682 aa21.46■■□□□ 1.03
PCDHB11-202ENST00000624887 VAMP7P51809 220 aa21.46■■□□□ 1.03
PCDHB11-202ENST00000624887 FMNL3Q8IVF7 1028 aa21.46■■□□□ 1.03
PCDHB11-202ENST00000624887 TMEM161BQ8NDZ6 487 aa21.46■■□□□ 1.03
PCDHB11-202ENST00000624887 KIFAP3Q92845 792 aa21.46■■□□□ 1.03
PCDHB11-202ENST00000624887 L3MBTL3Q96JM7 780 aaPredicted RBP21.46■■□□□ 1.03
PCDHB11-202ENST00000624887 CEP170P1Q96L14 293 aa21.46■■□□□ 1.03
PCDHB11-202ENST00000624887 C17orf75Q9HAS0 396 aa21.46■■□□□ 1.03
PCDHB11-202ENST00000624887 EXOC7Q9UPT5 735 aa21.46■■□□□ 1.03
PCDHB11-202ENST00000624887 DOCK5Q9H7D0 1870 aa21.46■■□□□ 1.03
PCDHB11-202ENST00000624887 TARSL2A2RTX5 802 aaKnown RBP21.45■■□□□ 1.02
PCDHB11-202ENST00000624887 P4HA2O15460 535 aa21.45■■□□□ 1.02
PCDHB11-202ENST00000624887 EVI5O60447 810 aa21.45■■□□□ 1.02
PCDHB11-202ENST00000624887 N4BP1O75113 896 aaKnown RBP21.45■■□□□ 1.02
PCDHB11-202ENST00000624887 RFX1P22670 979 aa21.45■■□□□ 1.02
PCDHB11-202ENST00000624887 NPTX2P47972 431 aa21.45■■□□□ 1.02
PCDHB11-202ENST00000624887 DMP1Q13316 513 aaPredicted RBP21.45■■□□□ 1.02
PCDHB11-202ENST00000624887 DRAP1Q14919 205 aaPredicted RBP21.45■■□□□ 1.02
PCDHB11-202ENST00000624887 SWSAP1Q6NVH7 229 aa21.45■■□□□ 1.02
PCDHB11-202ENST00000624887 DNERQ8NFT8 737 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms