RNA–Protein interactions for RNA: ENST00000619555.4

TARDBP-221, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-221ENST00000619555 ZNF558Q96NG5 402 aa12.55□□□□□ -0.4
TARDBP-221ENST00000619555 KIF2CQ99661 725 aa12.55□□□□□ -0.4
TARDBP-221ENST00000619555 DDX25Q9UHL0 483 aaKnown RBP12.55□□□□□ -0.4
TARDBP-221ENST00000619555 PUF60Q9UHX1 559 aaKnown RBP12.55□□□□□ -0.4
TARDBP-221ENST00000619555 LZTS1Q9Y250 596 aa12.55□□□□□ -0.4
TARDBP-221ENST00000619555 A0A087WZ62 844 aa12.54□□□□□ -0.4
TARDBP-221ENST00000619555 IGKV6-21A0A0C4DH24 114 aa12.54□□□□□ -0.4
TARDBP-221ENST00000619555 LOC730098B7Z3J9 87 aa12.54□□□□□ -0.4
TARDBP-221ENST00000619555 EML1O00423 815 aa12.54□□□□□ -0.4
TARDBP-221ENST00000619555 SLC37A4O43826 429 aa12.54□□□□□ -0.4
TARDBP-221ENST00000619555 ABCB7O75027 752 aa12.54□□□□□ -0.4
TARDBP-221ENST00000619555 ATF7P17544 494 aaPredicted RBP12.54□□□□□ -0.4
TARDBP-221ENST00000619555 LETM2Q2VYF4 491 aa12.54□□□□□ -0.4
TARDBP-221ENST00000619555 GALNT17Q6IS24 598 aa12.54□□□□□ -0.4
TARDBP-221ENST00000619555 PDE12Q6L8Q7 609 aaKnown RBP12.54□□□□□ -0.4
TARDBP-221ENST00000619555 CPLX2Q6PUV4 134 aaKnown RBP12.54□□□□□ -0.4
TARDBP-221ENST00000619555 MOXD1Q6UVY6 613 aa12.54□□□□□ -0.4
TARDBP-221ENST00000619555 HFE2Q6ZVN8 426 aa12.54□□□□□ -0.4
TARDBP-221ENST00000619555 KSR1Q8IVT5 923 aa12.54□□□□□ -0.4
TARDBP-221ENST00000619555 HELQQ8TDG4 1101 aa12.54□□□□□ -0.4
TARDBP-221ENST00000619555 CDCA3Q99618 268 aaPredicted RBP12.54□□□□□ -0.4
TARDBP-221ENST00000619555 TCF25Q9BQ70 676 aa12.54□□□□□ -0.4
TARDBP-221ENST00000619555 FDXACB1Q9BRP7 624 aaPredicted RBP12.54□□□□□ -0.4
TARDBP-221ENST00000619555 GCOM2Q9BZD3 368 aaPredicted RBP12.54□□□□□ -0.4
TARDBP-221ENST00000619555 ENTPD7Q9NQZ7 604 aa12.54□□□□□ -0.4
TARDBP-221ENST00000619555 GJB4Q9NTQ9 266 aa12.54□□□□□ -0.4
TARDBP-221ENST00000619555 SUCLA2Q9P2R7 463 aaPredicted RBP12.54□□□□□ -0.4
TARDBP-221ENST00000619555 MAFO75444 373 aaPredicted RBP12.53□□□□□ -0.4
TARDBP-221ENST00000619555 EOMESO95936 686 aa12.53□□□□□ -0.4
TARDBP-221ENST00000619555 TECP42680 631 aa12.53□□□□□ -0.4
TARDBP-221ENST00000619555 PSMC5P62195 406 aa12.53□□□□□ -0.4
TARDBP-221ENST00000619555 SCRN1Q12765 414 aa12.53□□□□□ -0.4
TARDBP-221ENST00000619555 KCNC3Q14003 757 aa12.53□□□□□ -0.4
TARDBP-221ENST00000619555 LONRF3Q496Y0 759 aa12.53□□□□□ -0.4
TARDBP-221ENST00000619555 PLA2G4FQ68DD2 849 aa12.53□□□□□ -0.4
TARDBP-221ENST00000619555 LLGL2Q6P1M3 1020 aa12.53□□□□□ -0.4
TARDBP-221ENST00000619555 ANO5Q75V66 913 aa12.53□□□□□ -0.4
TARDBP-221ENST00000619555 KRT25Q7Z3Z0 450 aa12.53□□□□□ -0.4
TARDBP-221ENST00000619555 RHPN2Q8IUC4 686 aa12.53□□□□□ -0.4
TARDBP-221ENST00000619555 SUSD6Q92537 303 aa12.53□□□□□ -0.4
TARDBP-221ENST00000619555 RPGRIP1Q96KN7 1286 aa12.53□□□□□ -0.4
TARDBP-221ENST00000619555 APOL5Q9BWW9 433 aa12.53□□□□□ -0.4
TARDBP-221ENST00000619555 PHF7Q9BWX1 381 aaPredicted RBP12.53□□□□□ -0.4
TARDBP-221ENST00000619555 DACT1Q9NYF0 836 aa12.53□□□□□ -0.4
TARDBP-221ENST00000619555 SPG21Q9NZD8 308 aa12.53□□□□□ -0.4
TARDBP-221ENST00000619555 VAV3Q9UKW4 847 aa12.53□□□□□ -0.4
TARDBP-221ENST00000619555 MYO10Q9HD67 2058 aa12.52□□□□□ -0.4
TARDBP-221ENST00000619555 NT5C1B-RDH14C9J2C7 533 aa12.52□□□□□ -0.41
TARDBP-221ENST00000619555 PPM1AP35813 382 aa12.52□□□□□ -0.41
TARDBP-221ENST00000619555 PHKA2P46019 1235 aa12.52□□□□□ -0.41
TARDBP-221ENST00000619555 DNM2P50570 870 aa12.52□□□□□ -0.41
TARDBP-221ENST00000619555 NPEPPSP55786 919 aa12.52□□□□□ -0.41
TARDBP-221ENST00000619555 CDC42EP1Q00587 391 aa12.52□□□□□ -0.41
TARDBP-221ENST00000619555 KRT17Q04695 432 aa12.52□□□□□ -0.41
TARDBP-221ENST00000619555 CBX2Q14781 532 aaPredicted RBP12.52□□□□□ -0.41
TARDBP-221ENST00000619555 ANKRD54Q6NXT1 300 aa12.52□□□□□ -0.41
TARDBP-221ENST00000619555 SYCE2Q6PIF2 218 aa12.52□□□□□ -0.41
TARDBP-221ENST00000619555 TMEM184AQ6ZMB5 413 aa12.52□□□□□ -0.41
TARDBP-221ENST00000619555 TMC7Q7Z402 723 aa12.52□□□□□ -0.41
TARDBP-221ENST00000619555 FAM177A1Q8N128 213 aaPredicted RBP12.52□□□□□ -0.41
TARDBP-221ENST00000619555 SLC39A11Q8N1S5 342 aa12.52□□□□□ -0.41
TARDBP-221ENST00000619555 ZNF579Q8NAF0 562 aaKnown RBP12.52□□□□□ -0.41
TARDBP-221ENST00000619555 OXER1Q8TDS5 423 aa12.52□□□□□ -0.41
TARDBP-221ENST00000619555 EDAQ92838 391 aa12.52□□□□□ -0.41
TARDBP-221ENST00000619555 LPPQ93052 612 aa12.52□□□□□ -0.41
TARDBP-221ENST00000619555 PHF20Q9BVI0 1012 aa12.52□□□□□ -0.41
TARDBP-221ENST00000619555 S1PR5Q9H228 398 aa12.52□□□□□ -0.41
TARDBP-221ENST00000619555 SLKQ9H2G2 1235 aaPredicted RBP12.52□□□□□ -0.41
TARDBP-221ENST00000619555 NGRNQ9NPE2 291 aaKnown RBP12.52□□□□□ -0.41
TARDBP-221ENST00000619555 CHST12Q9NRB3 414 aa12.52□□□□□ -0.41
TARDBP-221ENST00000619555 TPCN1Q9ULQ1 816 aa12.52□□□□□ -0.41
TARDBP-221ENST00000619555 WDFY4Q6ZS81 3184 aa12.52□□□□□ -0.41
TARDBP-221ENST00000619555 CCDC194A0A1B0GVG4 234 aa12.51□□□□□ -0.41
TARDBP-221ENST00000619555 MEIS3P2A8K0S8 358 aa12.51□□□□□ -0.41
TARDBP-221ENST00000619555 EIF5BO60841 1220 aaKnown RBP12.51□□□□□ -0.41
TARDBP-221ENST00000619555 SFPQP23246 707 aaKnown RBP eCLIP12.51□□□□□ -0.41
TARDBP-221ENST00000619555 QARSP47897 775 aaKnown RBP12.51□□□□□ -0.41
TARDBP-221ENST00000619555 RBM25P49756 843 aaKnown RBP12.51□□□□□ -0.41
TARDBP-221ENST00000619555 AK2P54819 239 aa12.51□□□□□ -0.41
TARDBP-221ENST00000619555 BCAR1P56945 870 aa12.51□□□□□ -0.41
TARDBP-221ENST00000619555 PPP2R5CQ13362 524 aa12.51□□□□□ -0.41
TARDBP-221ENST00000619555 EARS2Q5JPH6 523 aaKnown RBP12.51□□□□□ -0.41
TARDBP-221ENST00000619555 TWF2Q6IBS0 349 aaKnown RBP12.51□□□□□ -0.41
TARDBP-221ENST00000619555 PIK3AP1Q6ZUJ8 805 aa12.51□□□□□ -0.41
TARDBP-221ENST00000619555 CATSPER4Q7RTX7 472 aa12.51□□□□□ -0.41
TARDBP-221ENST00000619555 NEK8Q86SG6 692 aa12.51□□□□□ -0.41
TARDBP-221ENST00000619555 ZNF410Q86VK4 478 aa12.51□□□□□ -0.41
TARDBP-221ENST00000619555 MRPL43Q8N983 215 aaKnown RBP12.51□□□□□ -0.41
TARDBP-221ENST00000619555 FAM20AQ96MK3 541 aa12.51□□□□□ -0.41
TARDBP-221ENST00000619555 NLRP4Q96MN2 994 aa12.51□□□□□ -0.41
TARDBP-221ENST00000619555 KCNMB3Q9NPA1 279 aa12.51□□□□□ -0.41
TARDBP-221ENST00000619555 CYP26B1Q9NR63 512 aa12.51□□□□□ -0.41
TARDBP-221ENST00000619555 WRAP73Q9P2S5 460 aaPredicted RBP12.51□□□□□ -0.41
TARDBP-221ENST00000619555 PIN4Q9Y237 131 aaKnown RBP12.51□□□□□ -0.41
TARDBP-221ENST00000619555 CACNA1HO95180 2353 aa12.5□□□□□ -0.41
TARDBP-221ENST00000619555 FSD2A1L4K1 749 aa12.5□□□□□ -0.41
TARDBP-221ENST00000619555 FAM205CA6NFA0 338 aa12.5□□□□□ -0.41
TARDBP-221ENST00000619555 C2orf71A6NGG8 1288 aa12.5□□□□□ -0.41
TARDBP-221ENST00000619555 CCNT1O60563 726 aaKnown RBP12.5□□□□□ -0.41
TARDBP-221ENST00000619555 PFKFB2O60825 505 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms