RNA–Protein interactions for RNA: ENST00000617556.4

CYFIP1-207, Transcript of cytoplasmic FMR1 interacting protein 1, humanhuman

TSL 1 (best) BASIC

Gene CYFIP1, Length 5,674 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYFIP1-207ENST00000617556 PRKAG2Q9UGJ0 569 aa13.17□□□□□ -0.3
CYFIP1-207ENST00000617556 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.17□□□□□ -0.3
CYFIP1-207ENST00000617556 SLIT3O75094 1523 aa13.17□□□□□ -0.3
CYFIP1-207ENST00000617556 A0A1B0GTH6 734 aa13.17□□□□□ -0.3
CYFIP1-207ENST00000617556 PLS3P13797 630 aa13.17□□□□□ -0.3
CYFIP1-207ENST00000617556 MNAT1P51948 309 aa13.17□□□□□ -0.3
CYFIP1-207ENST00000617556 PRAMEF18Q5VWM3 479 aa13.17□□□□□ -0.3
CYFIP1-207ENST00000617556 MOXD1Q6UVY6 613 aa13.17□□□□□ -0.3
CYFIP1-207ENST00000617556 SAMD3Q8N6K7 520 aa13.17□□□□□ -0.3
CYFIP1-207ENST00000617556 CABS1Q96KC9 395 aa13.17□□□□□ -0.3
CYFIP1-207ENST00000617556 AGBL1Q96MI9 1066 aa13.17□□□□□ -0.3
CYFIP1-207ENST00000617556 PITPNM2Q9BZ72 1349 aa13.17□□□□□ -0.3
CYFIP1-207ENST00000617556 CCDC188H7C350 402 aa13.17□□□□□ -0.3
CYFIP1-207ENST00000617556 RNF40O75150 1001 aa13.17□□□□□ -0.3
CYFIP1-207ENST00000617556 SRGAP2BP0DMP2 458 aa13.17□□□□□ -0.3
CYFIP1-207ENST00000617556 CETPP11597 493 aa13.17□□□□□ -0.3
CYFIP1-207ENST00000617556 FKBP1AP62942 108 aaKnown RBP13.17□□□□□ -0.3
CYFIP1-207ENST00000617556 RDM1Q8NG50 284 aa13.17□□□□□ -0.3
CYFIP1-207ENST00000617556 OR6J1Q8NGC5 347 aa13.17□□□□□ -0.3
CYFIP1-207ENST00000617556 ATG4CQ96DT6 458 aa13.17□□□□□ -0.3
CYFIP1-207ENST00000617556 MOV10L1Q9BXT6 1211 aaKnown RBP13.17□□□□□ -0.3
CYFIP1-207ENST00000617556 EMSYQ7Z589 1322 aa13.17□□□□□ -0.3
CYFIP1-207ENST00000617556 TYW5A2RUC4 315 aaKnown RBP13.17□□□□□ -0.3
CYFIP1-207ENST00000617556 PALMO75781 387 aa13.17□□□□□ -0.3
CYFIP1-207ENST00000617556 GFPT1Q06210 699 aaPredicted RBP13.17□□□□□ -0.3
CYFIP1-207ENST00000617556 SNX1Q13596 522 aa13.17□□□□□ -0.3
CYFIP1-207ENST00000617556 MXD4Q14582 209 aaPredicted RBP13.17□□□□□ -0.3
CYFIP1-207ENST00000617556 PDXDC1Q6P996 788 aa13.17□□□□□ -0.3
CYFIP1-207ENST00000617556 PHLDB2Q86SQ0 1253 aa13.17□□□□□ -0.3
CYFIP1-207ENST00000617556 POLR3CQ9BUI4 534 aaPredicted RBP13.17□□□□□ -0.3
CYFIP1-207ENST00000617556 CALN1Q9BXU9 219 aa13.17□□□□□ -0.3
CYFIP1-207ENST00000617556 MKRN1Q9UHC7 482 aaKnown RBP13.17□□□□□ -0.3
CYFIP1-207ENST00000617556 PPP2R3BQ9Y5P8 575 aa13.17□□□□□ -0.3
CYFIP1-207ENST00000617556 TNPO2O14787 897 aaKnown RBP13.16□□□□□ -0.3
CYFIP1-207ENST00000617556 PSMA2P25787 234 aa13.16□□□□□ -0.3
CYFIP1-207ENST00000617556 RFC5P40937 340 aa13.16□□□□□ -0.3
CYFIP1-207ENST00000617556 SMC1BQ8NDV3 1235 aa13.16□□□□□ -0.3
CYFIP1-207ENST00000617556 FBXL13Q8NEE6 735 aa13.16□□□□□ -0.3
CYFIP1-207ENST00000617556 PFDN6O15212 129 aa13.16□□□□□ -0.3
CYFIP1-207ENST00000617556 HUS1O60921 280 aa13.16□□□□□ -0.3
CYFIP1-207ENST00000617556 CIB2O75838 187 aa13.16□□□□□ -0.3
CYFIP1-207ENST00000617556 TAF1CQ15572 869 aaPredicted RBP13.16□□□□□ -0.3
CYFIP1-207ENST00000617556 EDRF1Q3B7T1 1238 aa13.16□□□□□ -0.3
CYFIP1-207ENST00000617556 USP49Q70CQ1 688 aa13.16□□□□□ -0.3
CYFIP1-207ENST00000617556 THEM5Q8N1Q8 247 aa13.16□□□□□ -0.3
CYFIP1-207ENST00000617556 ANAPC5Q9UJX4 755 aa13.16□□□□□ -0.3
CYFIP1-207ENST00000617556 ITIH6Q6UXX5 1313 aa13.16□□□□□ -0.3
CYFIP1-207ENST00000617556 CCDC151A5D8V7 595 aa13.16□□□□□ -0.3
CYFIP1-207ENST00000617556 FMR1Q06787 632 aaKnown RBP eCLIP13.16□□□□□ -0.33e-6■■■■□ 21.1
CYFIP1-207ENST00000617556 GH1P01241 217 aa13.16□□□□□ -0.3
CYFIP1-207ENST00000617556 GARSP41250 739 aaKnown RBP13.16□□□□□ -0.3
CYFIP1-207ENST00000617556 PSMC4P43686 418 aa13.16□□□□□ -0.3
CYFIP1-207ENST00000617556 YWHAGP61981 247 aaKnown RBP eCLIP13.16□□□□□ -0.3
CYFIP1-207ENST00000617556 GPRASP2Q96D09 838 aa13.16□□□□□ -0.3
CYFIP1-207ENST00000617556 IPO11Q9UI26 975 aaKnown RBP13.16□□□□□ -0.3
CYFIP1-207ENST00000617556 MAD1L1Q9Y6D9 718 aa13.16□□□□□ -0.3
CYFIP1-207ENST00000617556 EIF3DO15371 548 aaKnown RBP eCLIP13.15□□□□□ -0.3
CYFIP1-207ENST00000617556 PRKCBP05771 671 aa13.15□□□□□ -0.3
CYFIP1-207ENST00000617556 DR1Q01658 176 aa13.15□□□□□ -0.3
CYFIP1-207ENST00000617556 ARL13BQ3SXY8 428 aa13.15□□□□□ -0.3
CYFIP1-207ENST00000617556 DARS2Q6PI48 645 aaKnown RBP13.15□□□□□ -0.3
CYFIP1-207ENST00000617556 TRIM72Q6ZMU5 477 aa13.15□□□□□ -0.3
CYFIP1-207ENST00000617556 FAM83AQ86UY5 434 aa13.15□□□□□ -0.3
CYFIP1-207ENST00000617556 GSDMBQ8TAX9 411 aa13.15□□□□□ -0.3
CYFIP1-207ENST00000617556 MGARPQ8TDB4 240 aa13.15□□□□□ -0.3
CYFIP1-207ENST00000617556 ANAPC7Q9UJX3 599 aa13.15□□□□□ -0.3
CYFIP1-207ENST00000617556 TMX2Q9Y320 296 aa13.15□□□□□ -0.3
CYFIP1-207ENST00000617556 ADGRG1Q9Y653 693 aa13.15□□□□□ -0.3
CYFIP1-207ENST00000617556 SYNGAP1Q96PV0 1343 aa13.15□□□□□ -0.3
CYFIP1-207ENST00000617556 TRIM49P0CI25 452 aa13.15□□□□□ -0.3
CYFIP1-207ENST00000617556 TRIM49CP0CI26 452 aa13.15□□□□□ -0.3
CYFIP1-207ENST00000617556 MYBL1P10243 752 aa13.15□□□□□ -0.3
CYFIP1-207ENST00000617556 SOX5P35711 763 aa13.15□□□□□ -0.3
CYFIP1-207ENST00000617556 PLTPP55058 493 aa13.15□□□□□ -0.3
CYFIP1-207ENST00000617556 SNRPFP62306 86 aaKnown RBP13.15□□□□□ -0.3
CYFIP1-207ENST00000617556 PTPAQ15257 358 aa13.15□□□□□ -0.3
CYFIP1-207ENST00000617556 DUOXA2Q1HG44 320 aa13.15□□□□□ -0.3
CYFIP1-207ENST00000617556 TAB3Q8N5C8 712 aaPredicted RBP13.15□□□□□ -0.3
CYFIP1-207ENST00000617556 RNF149Q8NC42 400 aa13.15□□□□□ -0.3
CYFIP1-207ENST00000617556 ADARB2Q9NS39 739 aaKnown RBP13.15□□□□□ -0.3
CYFIP1-207ENST00000617556 SUCLA2Q9P2R7 463 aaPredicted RBP13.15□□□□□ -0.3
CYFIP1-207ENST00000617556 ARHGAP25P42331 645 aa13.15□□□□□ -0.3
CYFIP1-207ENST00000617556 DDR1Q08345 913 aa13.15□□□□□ -0.3
CYFIP1-207ENST00000617556 ZNF394Q53GI3 561 aa13.15□□□□□ -0.3
CYFIP1-207ENST00000617556 GLE1Q53GS7 698 aaKnown RBP13.15□□□□□ -0.3
CYFIP1-207ENST00000617556 CAPN12Q6ZSI9 719 aa13.15□□□□□ -0.3
CYFIP1-207ENST00000617556 C15orf52Q6ZUT6 534 aaKnown RBP13.15□□□□□ -0.3
CYFIP1-207ENST00000617556 VSIG1Q86XK7 387 aa13.15□□□□□ -0.3
CYFIP1-207ENST00000617556 ENGASEQ8NFI3 743 aa13.15□□□□□ -0.3
CYFIP1-207ENST00000617556 HPS3Q969F9 1004 aa13.15□□□□□ -0.3
CYFIP1-207ENST00000617556 FAM163AQ96GL9 167 aaPredicted RBP13.15□□□□□ -0.3
CYFIP1-207ENST00000617556 RBM41Q96IZ5 413 aaKnown RBP13.15□□□□□ -0.3
CYFIP1-207ENST00000617556 HSPBP1Q9NZL4 362 aa13.15□□□□□ -0.3
CYFIP1-207ENST00000617556 TROVE2P10155 538 aaKnown RBP eCLIP13.15□□□□□ -0.3
CYFIP1-207ENST00000617556 DYNLT1P63172 113 aa13.15□□□□□ -0.3
CYFIP1-207ENST00000617556 GNGT1P63211 74 aa13.15□□□□□ -0.3
CYFIP1-207ENST00000617556 SLMAPQ14BN4 828 aa13.15□□□□□ -0.3
CYFIP1-207ENST00000617556 CCDC62Q6P9F0 684 aa13.15□□□□□ -0.3
CYFIP1-207ENST00000617556 WHAMMQ8TF30 809 aa13.15□□□□□ -0.3
CYFIP1-207ENST00000617556 RNF139Q8WU17 664 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms