RNA–Protein interactions for RNA: ENST00000617482.4

C11orf54-215, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3 BASIC

Gene C11orf54, Length 2,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-215ENST00000617482 NPEPPSP55786 919 aa12.8□□□□□ -0.36
C11orf54-215ENST00000617482 ZNF211Q13398 564 aaPredicted RBP12.8□□□□□ -0.36
C11orf54-215ENST00000617482 DCAF12L1Q5VU92 463 aa12.8□□□□□ -0.36
C11orf54-215ENST00000617482 LRIG3Q6UXM1 1119 aa12.8□□□□□ -0.36
C11orf54-215ENST00000617482 SYCP3Q8IZU3 236 aa12.8□□□□□ -0.36
C11orf54-215ENST00000617482 ACER1Q8TDN7 264 aa12.8□□□□□ -0.36
C11orf54-215ENST00000617482 ZNF473Q8WTR7 871 aaKnown RBP12.8□□□□□ -0.36
C11orf54-215ENST00000617482 RFFLQ8WZ73 363 aa12.8□□□□□ -0.36
C11orf54-215ENST00000617482 MASTLQ96GX5 879 aa12.8□□□□□ -0.36
C11orf54-215ENST00000617482 QTRT2Q9H974 415 aaKnown RBP12.8□□□□□ -0.36
C11orf54-215ENST00000617482 UTP11Q9Y3A2 253 aaKnown RBP12.8□□□□□ -0.36
C11orf54-215ENST00000617482 FOXN3O00409 490 aaPredicted RBP12.8□□□□□ -0.36
C11orf54-215ENST00000617482 ONECUT3O60422 494 aaPredicted RBP12.8□□□□□ -0.36
C11orf54-215ENST00000617482 EXOC3O60645 756 aa12.8□□□□□ -0.36
C11orf54-215ENST00000617482 TMEM253P0C7T8 217 aa12.8□□□□□ -0.36
C11orf54-215ENST00000617482 ARP10275 920 aa12.8□□□□□ -0.36
C11orf54-215ENST00000617482 TNFAIP3P21580 790 aa12.8□□□□□ -0.36
C11orf54-215ENST00000617482 TMOD1P28289 359 aa12.8□□□□□ -0.36
C11orf54-215ENST00000617482 DHX9Q08211 1270 aaKnown RBP12.8□□□□□ -0.36
C11orf54-215ENST00000617482 SLC15A2Q16348 729 aa12.8□□□□□ -0.36
C11orf54-215ENST00000617482 PHLDB3Q6NSJ2 640 aa12.8□□□□□ -0.36
C11orf54-215ENST00000617482 NLRP14Q86W24 1093 aa12.8□□□□□ -0.36
C11orf54-215ENST00000617482 KAT2BQ92831 832 aa12.8□□□□□ -0.36
C11orf54-215ENST00000617482 PRMT6Q96LA8 375 aaPredicted RBP12.8□□□□□ -0.36
C11orf54-215ENST00000617482 MRIQ9BWK5 157 aa12.8□□□□□ -0.36
C11orf54-215ENST00000617482 SLITRK6Q9H5Y7 841 aa12.8□□□□□ -0.36
C11orf54-215ENST00000617482 APEX2Q9UBZ4 518 aa12.8□□□□□ -0.36
C11orf54-215ENST00000617482 LRRC37AA6NMS7 1700 aa12.8□□□□□ -0.36
C11orf54-215ENST00000617482 SMCHD1A6NHR9 2005 aa12.79□□□□□ -0.36
C11orf54-215ENST00000617482 BHMG1C9JSJ3 638 aaPredicted RBP12.79□□□□□ -0.36
C11orf54-215ENST00000617482 DDX39AO00148 427 aaKnown RBP12.79□□□□□ -0.36
C11orf54-215ENST00000617482 DDX3YO15523 660 aaKnown RBP12.79□□□□□ -0.36
C11orf54-215ENST00000617482 POLR2MP0CAP2 368 aa12.79□□□□□ -0.36
C11orf54-215ENST00000617482 PDE6BP35913 854 aa12.79□□□□□ -0.36
C11orf54-215ENST00000617482 PRELPP51888 382 aa12.79□□□□□ -0.36
C11orf54-215ENST00000617482 HDLBPQ00341 1268 aaKnown RBP12.79□□□□□ -0.36
C11orf54-215ENST00000617482 MYL7Q01449 175 aa12.79□□□□□ -0.36
C11orf54-215ENST00000617482 PPP2R5CQ13362 524 aa12.79□□□□□ -0.36
C11orf54-215ENST00000617482 ZYXQ15942 572 aaKnown RBP12.79□□□□□ -0.36
C11orf54-215ENST00000617482 FBXW10Q5XX13 1052 aa12.79□□□□□ -0.36
C11orf54-215ENST00000617482 COL23A1Q86Y22 540 aaPredicted RBP12.79□□□□□ -0.36
C11orf54-215ENST00000617482 NLGN1Q8N2Q7 840 aa12.79□□□□□ -0.36
C11orf54-215ENST00000617482 PLCD3Q8N3E9 789 aa12.79□□□□□ -0.36
C11orf54-215ENST00000617482 OTUD6BQ8N6M0 293 aa12.79□□□□□ -0.36
C11orf54-215ENST00000617482 C1orf131Q8NDD1 294 aaKnown RBP12.79□□□□□ -0.36
C11orf54-215ENST00000617482 MYCBPAPQ8TBZ2 947 aa12.79□□□□□ -0.36
C11orf54-215ENST00000617482 UNC45AQ9H3U1 944 aa12.79□□□□□ -0.36
C11orf54-215ENST00000617482 PCIF1Q9H4Z3 704 aa12.79□□□□□ -0.36
C11orf54-215ENST00000617482 EFCC1Q9HA90 598 aa12.79□□□□□ -0.36
C11orf54-215ENST00000617482 LRRC4CQ9HCJ2 640 aa12.79□□□□□ -0.36
C11orf54-215ENST00000617482 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.79□□□□□ -0.36
C11orf54-215ENST00000617482 DMAC2Q9NW81 257 aa12.79□□□□□ -0.36
C11orf54-215ENST00000617482 CHORDC1Q9UHD1 332 aaPredicted RBP12.79□□□□□ -0.36
C11orf54-215ENST00000617482 TRPC5Q9UL62 973 aaPredicted RBP12.79□□□□□ -0.36
C11orf54-215ENST00000617482 COG5Q9UP83 839 aa12.79□□□□□ -0.36
C11orf54-215ENST00000617482 QSER1Q2KHR3 1735 aa12.79□□□□□ -0.36
C11orf54-215ENST00000617482 DCDC2CA8MYV0 355 aa12.79□□□□□ -0.36
C11orf54-215ENST00000617482 TISP43B9A030 160 aa12.79□□□□□ -0.36
C11orf54-215ENST00000617482 KIAA0754O94854 1291 aa12.79□□□□□ -0.36
C11orf54-215ENST00000617482 CPP00450 1065 aa12.79□□□□□ -0.36
C11orf54-215ENST00000617482 MMP10P09238 476 aa12.79□□□□□ -0.36
C11orf54-215ENST00000617482 HSPA1LP34931 641 aa12.79□□□□□ -0.36
C11orf54-215ENST00000617482 DLG4P78352 724 aa12.79□□□□□ -0.36
C11orf54-215ENST00000617482 PPATQ06203 517 aa12.79□□□□□ -0.36
C11orf54-215ENST00000617482 AADACL2Q6P093 401 aa12.79□□□□□ -0.36
C11orf54-215ENST00000617482 TMC3Q7Z5M5 1100 aa12.79□□□□□ -0.36
C11orf54-215ENST00000617482 GLG1Q92896 1179 aa12.79□□□□□ -0.36
C11orf54-215ENST00000617482 SLC5A5Q92911 643 aa12.79□□□□□ -0.36
C11orf54-215ENST00000617482 NACC1Q96RE7 527 aa12.79□□□□□ -0.36
C11orf54-215ENST00000617482 ZNF577Q9BSK1 485 aa12.79□□□□□ -0.36
C11orf54-215ENST00000617482 SYT11Q9BT88 431 aa12.79□□□□□ -0.36
C11orf54-215ENST00000617482 MKNK1Q9BUB5 465 aa12.79□□□□□ -0.36
C11orf54-215ENST00000617482 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.79□□□□□ -0.36
C11orf54-215ENST00000617482 PKD2L1Q9P0L9 805 aa12.79□□□□□ -0.36
C11orf54-215ENST00000617482 NOVA2Q9UNW9 492 aaKnown RBP12.79□□□□□ -0.36
C11orf54-215ENST00000617482 CEP55Q53EZ4 464 aa12.78□□□□□ -0.36
C11orf54-215ENST00000617482 FAM43BQ6ZT52 329 aaPredicted RBP12.78□□□□□ -0.36
C11orf54-215ENST00000617482 TRMT1LQ7Z2T5 733 aaKnown RBP12.78□□□□□ -0.36
C11orf54-215ENST00000617482 SLC20A1Q8WUM9 679 aa12.78□□□□□ -0.36
C11orf54-215ENST00000617482 ERVK-5Q9HDB9 667 aa12.78□□□□□ -0.36
C11orf54-215ENST00000617482 UBE2TQ9NPD8 197 aaPredicted RBP12.78□□□□□ -0.36
C11orf54-215ENST00000617482 TMOD4Q9NZQ9 345 aa12.78□□□□□ -0.36
C11orf54-215ENST00000617482 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.78□□□□□ -0.36
C11orf54-215ENST00000617482 SERPINA10Q9UK55 444 aa12.78□□□□□ -0.36
C11orf54-215ENST00000617482 ATP8A1Q9Y2Q0 1164 aa12.78□□□□□ -0.36
C11orf54-215ENST00000617482 SIPA1L1O43166 1804 aa12.78□□□□□ -0.36
C11orf54-215ENST00000617482 TCP10L2B9ZVM9 353 aa12.78□□□□□ -0.36
C11orf54-215ENST00000617482 MEFVO15553 781 aaPredicted RBP12.78□□□□□ -0.36
C11orf54-215ENST00000617482 HIP1RO75146 1068 aa12.78□□□□□ -0.36
C11orf54-215ENST00000617482 ZNF131P52739 623 aa12.78□□□□□ -0.36
C11orf54-215ENST00000617482 POU5F1Q01860 360 aaKnown RBP12.78□□□□□ -0.36
C11orf54-215ENST00000617482 BFSP1Q12934 665 aa12.78□□□□□ -0.36
C11orf54-215ENST00000617482 NFIL3Q16649 462 aa12.78□□□□□ -0.36
C11orf54-215ENST00000617482 AOC3Q16853 763 aa12.78□□□□□ -0.36
C11orf54-215ENST00000617482 RNF187Q5TA31 235 aaPredicted RBP12.78□□□□□ -0.36
C11orf54-215ENST00000617482 RUFY4Q6ZNE9 571 aa12.78□□□□□ -0.36
C11orf54-215ENST00000617482 LXNQ9BS40 222 aa12.78□□□□□ -0.36
C11orf54-215ENST00000617482 CNOT8Q9UFF9 292 aaKnown RBP12.78□□□□□ -0.36
C11orf54-215ENST00000617482 CAPN7Q9Y6W3 813 aa12.78□□□□□ -0.36
C11orf54-215ENST00000617482 ARHGEF35A5YM69 484 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms