RNA–Protein interactions for RNA: ENST00000614240.4

SMN2-213, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-213ENST00000614240 EDIL3O43854 480 aa20.08■□□□□ 0.81
SMN2-213ENST00000614240 PSMD10O75832 226 aa20.08■□□□□ 0.81
SMN2-213ENST00000614240 SFPQP23246 707 aaKnown RBP eCLIP20.08■□□□□ 0.81
SMN2-213ENST00000614240 SIGLEC14Q08ET2 396 aa20.08■□□□□ 0.81
SMN2-213ENST00000614240 DRP2Q13474 957 aa20.08■□□□□ 0.81
SMN2-213ENST00000614240 KCNC3Q14003 757 aa20.08■□□□□ 0.81
SMN2-213ENST00000614240 TARBP2Q15633 366 aaKnown RBP20.08■□□□□ 0.81
SMN2-213ENST00000614240 CES5AQ6NT32 575 aa20.08■□□□□ 0.81
SMN2-213ENST00000614240 SLC39A11Q8N1S5 342 aa20.08■□□□□ 0.81
SMN2-213ENST00000614240 FBXL6Q8N531 539 aa20.08■□□□□ 0.81
SMN2-213ENST00000614240 MRPL43Q8N983 215 aaKnown RBP20.08■□□□□ 0.81
SMN2-213ENST00000614240 SH2D3AQ9BRG2 576 aa20.08■□□□□ 0.81
SMN2-213ENST00000614240 NIFKQ9BYG3 293 aaKnown RBP20.08■□□□□ 0.81
SMN2-213ENST00000614240 TSHZ2Q9NRE2 1034 aa20.08■□□□□ 0.81
SMN2-213ENST00000614240 A0A087WZ62 844 aa20.07■□□□□ 0.8
SMN2-213ENST00000614240 TMEM150BA6NC51 233 aa20.07■□□□□ 0.8
SMN2-213ENST00000614240 C2orf71A6NGG8 1288 aa20.07■□□□□ 0.8
SMN2-213ENST00000614240 NT5C1B-RDH14C9J2C7 533 aa20.07■□□□□ 0.8
SMN2-213ENST00000614240 TDP2O95551 362 aa20.07■□□□□ 0.8
SMN2-213ENST00000614240 BCAR1P56945 870 aa20.07■□□□□ 0.8
SMN2-213ENST00000614240 EVCP57679 992 aa20.07■□□□□ 0.8
SMN2-213ENST00000614240 PTPN21Q16825 1174 aa20.07■□□□□ 0.8
SMN2-213ENST00000614240 TWF2Q6IBS0 349 aaKnown RBP20.07■□□□□ 0.8
SMN2-213ENST00000614240 ZNF598Q86UK7 904 aaKnown RBP20.07■□□□□ 0.8
SMN2-213ENST00000614240 BLIDQ8IZY5 108 aa20.07■□□□□ 0.8
SMN2-213ENST00000614240 TMEM169Q96HH4 297 aa20.07■□□□□ 0.8
SMN2-213ENST00000614240 PRRX2Q99811 253 aa20.07■□□□□ 0.8
SMN2-213ENST00000614240 FDXACB1Q9BRP7 624 aaPredicted RBP20.07■□□□□ 0.8
SMN2-213ENST00000614240 INO80BQ9C086 356 aaPredicted RBP20.07■□□□□ 0.8
SMN2-213ENST00000614240 SUCLA2Q9P2R7 463 aaPredicted RBP20.07■□□□□ 0.8
SMN2-213ENST00000614240 NR2E1Q9Y466 385 aa20.07■□□□□ 0.8
SMN2-213ENST00000614240 TECTAO75443 2155 aa20.07■□□□□ 0.8
SMN2-213ENST00000614240 ZC3H11AO75152 810 aaKnown RBP eCLIP20.06■□□□□ 0.8
SMN2-213ENST00000614240 DEXIO95424 95 aa20.06■□□□□ 0.8
SMN2-213ENST00000614240 CXCL14O95715 111 aa20.06■□□□□ 0.8
SMN2-213ENST00000614240 SKIP12755 728 aa20.06■□□□□ 0.8
SMN2-213ENST00000614240 PTPN5P54829 565 aa20.06■□□□□ 0.8
SMN2-213ENST00000614240 LONRF3Q496Y0 759 aa20.06■□□□□ 0.8
SMN2-213ENST00000614240 IER5LQ5T953 404 aa20.06■□□□□ 0.8
SMN2-213ENST00000614240 CPLX2Q6PUV4 134 aaKnown RBP20.06■□□□□ 0.8
SMN2-213ENST00000614240 RUFY3Q7L099 469 aa20.06■□□□□ 0.8
SMN2-213ENST00000614240 RHPN2Q8IUC4 686 aa20.06■□□□□ 0.8
SMN2-213ENST00000614240 PIN4Q9Y237 131 aaKnown RBP20.06■□□□□ 0.8
SMN2-213ENST00000614240 CLASP2O75122 1294 aaKnown RBP20.05■□□□□ 0.8
SMN2-213ENST00000614240 PHKA2P46019 1235 aa20.05■□□□□ 0.8
SMN2-213ENST00000614240 RNASELQ05823 741 aaKnown RBP20.05■□□□□ 0.8
SMN2-213ENST00000614240 NONOQ15233 471 aaKnown RBP eCLIP20.05■□□□□ 0.8
SMN2-213ENST00000614240 GLB1LQ6UWU2 654 aa20.05■□□□□ 0.8
SMN2-213ENST00000614240 ZNF410Q86VK4 478 aa20.05■□□□□ 0.8
SMN2-213ENST00000614240 PRSS33Q8NF86 280 aa20.05■□□□□ 0.8
SMN2-213ENST00000614240 NLRP4Q96MN2 994 aa20.05■□□□□ 0.8
SMN2-213ENST00000614240 JPH2Q9BR39 696 aaPredicted RBP20.05■□□□□ 0.8
SMN2-213ENST00000614240 SLKQ9H2G2 1235 aaPredicted RBP20.05■□□□□ 0.8
SMN2-213ENST00000614240 INPP5FQ9Y2H2 1132 aa20.05■□□□□ 0.8
SMN2-213ENST00000614240 HCFC2Q9Y5Z7 792 aa20.05■□□□□ 0.8
SMN2-213ENST00000614240 CYP46A1Q9Y6A2 500 aa20.05■□□□□ 0.8
SMN2-213ENST00000614240 CYP3A7-CYP3A51PA0A087WV96 503 aa20.04■□□□□ 0.8
SMN2-213ENST00000614240 CARNS1A5YM72 827 aa20.04■□□□□ 0.8
SMN2-213ENST00000614240 CYP3A7P24462 503 aa20.04■□□□□ 0.8
SMN2-213ENST00000614240 PSMC5P62195 406 aa20.04■□□□□ 0.8
SMN2-213ENST00000614240 ITIH3Q06033 890 aa20.04■□□□□ 0.8
SMN2-213ENST00000614240 STK3Q13188 491 aa20.04■□□□□ 0.8
SMN2-213ENST00000614240 TOB2Q14106 344 aaPredicted RBP20.04■□□□□ 0.8
SMN2-213ENST00000614240 GALNT17Q6IS24 598 aa20.04■□□□□ 0.8
SMN2-213ENST00000614240 CATSPER4Q7RTX7 472 aa20.04■□□□□ 0.8
SMN2-213ENST00000614240 VPS52Q8N1B4 723 aa20.04■□□□□ 0.8
SMN2-213ENST00000614240 RSPH1Q8WYR4 309 aa20.04■□□□□ 0.8
SMN2-213ENST00000614240 LPPQ93052 612 aa20.04■□□□□ 0.8
SMN2-213ENST00000614240 NECTIN4Q96NY8 510 aa20.04■□□□□ 0.8
SMN2-213ENST00000614240 LARP6Q9BRS8 491 aaKnown RBP20.04■□□□□ 0.8
SMN2-213ENST00000614240 ADAM7Q9H2U9 754 aa20.04■□□□□ 0.8
SMN2-213ENST00000614240 DDX25Q9UHL0 483 aaKnown RBP20.04■□□□□ 0.8
SMN2-213ENST00000614240 IGKV6-21A0A0C4DH24 114 aa20.03■□□□□ 0.8
SMN2-213ENST00000614240 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.03■□□□□ 0.8
SMN2-213ENST00000614240 STBD1O95210 358 aa20.03■□□□□ 0.8
SMN2-213ENST00000614240 INF2Q27J81 1249 aa20.03■□□□□ 0.8
SMN2-213ENST00000614240 NOMO2Q5JPE7 1267 aa20.03■□□□□ 0.8
SMN2-213ENST00000614240 MOXD1Q6UVY6 613 aa20.03■□□□□ 0.8
SMN2-213ENST00000614240 KRT25Q7Z3Z0 450 aa20.03■□□□□ 0.8
SMN2-213ENST00000614240 DAGLBQ8NCG7 672 aa20.03■□□□□ 0.8
SMN2-213ENST00000614240 RIPOR3Q96MK2 946 aa20.03■□□□□ 0.8
SMN2-213ENST00000614240 ZSWIM6Q9HCJ5 1215 aa20.03■□□□□ 0.8
SMN2-213ENST00000614240 MAFO75444 373 aaPredicted RBP20.02■□□□□ 0.8
SMN2-213ENST00000614240 MTHFRP42898 656 aa20.02■□□□□ 0.8
SMN2-213ENST00000614240 RAB27AP51159 221 aa20.02■□□□□ 0.8
SMN2-213ENST00000614240 LETM2Q2VYF4 491 aa20.02■□□□□ 0.8
SMN2-213ENST00000614240 RARS2Q5T160 578 aaKnown RBP20.02■□□□□ 0.8
SMN2-213ENST00000614240 PLA2G4FQ68DD2 849 aa20.02■□□□□ 0.8
SMN2-213ENST00000614240 KSR1Q8IVT5 923 aa20.02■□□□□ 0.8
SMN2-213ENST00000614240 ETNPPLQ8TBG4 499 aa20.02■□□□□ 0.8
SMN2-213ENST00000614240 PGBD4Q96DM1 585 aa20.02■□□□□ 0.8
SMN2-213ENST00000614240 ASIC4Q96FT7 647 aa20.02■□□□□ 0.8
SMN2-213ENST00000614240 ZNF274Q96GC6 653 aaPredicted RBP20.02■□□□□ 0.8
SMN2-213ENST00000614240 CEP89Q96ST8 783 aa20.02■□□□□ 0.8
SMN2-213ENST00000614240 TRAIPQ9BWF2 469 aa20.02■□□□□ 0.8
SMN2-213ENST00000614240 GBP3Q9H0R5 595 aa20.02■□□□□ 0.8
SMN2-213ENST00000614240 FAM105AQ9NUU6 356 aa20.02■□□□□ 0.8
SMN2-213ENST00000614240 CDH22Q9UJ99 828 aa20.02■□□□□ 0.8
SMN2-213ENST00000614240 ZNF318Q5VUA4 2279 aa20.02■□□□□ 0.8
SMN2-213ENST00000614240 CCDC194A0A1B0GVG4 234 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 128.4 ms