RNA–Protein interactions for RNA: ENST00000612369.4

VCX3A-203, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-203ENST00000612369 PSPC1Q8WXF1 523 aaKnown RBP20.34■□□□□ 0.85
VCX3A-203ENST00000612369 RSPH1Q8WYR4 309 aa20.34■□□□□ 0.85
VCX3A-203ENST00000612369 PABPC5Q96DU9 382 aaKnown RBP20.34■□□□□ 0.85
VCX3A-203ENST00000612369 ALG13Q9NP73 1137 aaKnown RBP20.34■□□□□ 0.85
VCX3A-203ENST00000612369 ANKEF1Q9NU02 776 aa20.34■□□□□ 0.85
VCX3A-203ENST00000612369 BRWD1Q9NSI6 2320 aa20.34■□□□□ 0.85
VCX3A-203ENST00000612369 NCOR1O75376 2440 aa20.34■□□□□ 0.85
VCX3A-203ENST00000612369 KIAA1671Q9BY89 1806 aa20.33■□□□□ 0.85
VCX3A-203ENST00000612369 WNT7AO00755 349 aa20.33■□□□□ 0.85
VCX3A-203ENST00000612369 ITGB1P05556 798 aa20.33■□□□□ 0.85
VCX3A-203ENST00000612369 XRCC6P12956 609 aaKnown RBP eCLIP20.33■□□□□ 0.85
VCX3A-203ENST00000612369 FGFR4P22455 802 aa20.33■□□□□ 0.85
VCX3A-203ENST00000612369 TRAPPC10P48553 1259 aa20.33■□□□□ 0.85
VCX3A-203ENST00000612369 UBE3AQ05086 875 aa20.33■□□□□ 0.85
VCX3A-203ENST00000612369 GNL2Q13823 731 aaKnown RBP20.33■□□□□ 0.85
VCX3A-203ENST00000612369 LEXMQ3ZCV2 418 aa20.33■□□□□ 0.85
VCX3A-203ENST00000612369 SPOUT1Q5T280 376 aaKnown RBP20.33■□□□□ 0.85
VCX3A-203ENST00000612369 SRGAP1Q7Z6B7 1085 aa20.33■□□□□ 0.85
VCX3A-203ENST00000612369 ABI1Q8IZP0 508 aa20.33■□□□□ 0.85
VCX3A-203ENST00000612369 PRPF31Q8WWY3 499 aaKnown RBP20.33■□□□□ 0.85
VCX3A-203ENST00000612369 PPP2R3CQ969Q6 453 aa20.33■□□□□ 0.85
VCX3A-203ENST00000612369 NLRP4Q96MN2 994 aa20.33■□□□□ 0.85
VCX3A-203ENST00000612369 IFT122Q9HBG6 1241 aa20.33■□□□□ 0.85
VCX3A-203ENST00000612369 TYW1Q9NV66 732 aaKnown RBP20.33■□□□□ 0.85
VCX3A-203ENST00000612369 KIF3AQ9Y496 699 aa20.33■□□□□ 0.85
VCX3A-203ENST00000612369 CSDE1O75534 798 aaKnown RBP20.32■□□□□ 0.84
VCX3A-203ENST00000612369 FGFR1P11362 822 aa20.32■□□□□ 0.84
VCX3A-203ENST00000612369 SKIP12755 728 aa20.32■□□□□ 0.84
VCX3A-203ENST00000612369 ATP2B1P20020 1258 aa20.32■□□□□ 0.84
VCX3A-203ENST00000612369 MCM7P33993 719 aa20.32■□□□□ 0.84
VCX3A-203ENST00000612369 EMC2Q15006 297 aa20.32■□□□□ 0.84
VCX3A-203ENST00000612369 PUS10Q3MIT2 529 aaKnown RBP20.32■□□□□ 0.84
VCX3A-203ENST00000612369 ZNF598Q86UK7 904 aaKnown RBP20.32■□□□□ 0.84
VCX3A-203ENST00000612369 NOSTRINQ8IVI9 506 aa20.32■□□□□ 0.84
VCX3A-203ENST00000612369 KSR1Q8IVT5 923 aa20.32■□□□□ 0.84
VCX3A-203ENST00000612369 CASD1Q96PB1 797 aa20.32■□□□□ 0.84
VCX3A-203ENST00000612369 MTRQ99707 1265 aa20.32■□□□□ 0.84
VCX3A-203ENST00000612369 TMEM60Q9H2L4 133 aa20.32■□□□□ 0.84
VCX3A-203ENST00000612369 DGAT1O75907 488 aa20.31■□□□□ 0.84
VCX3A-203ENST00000612369 LAG3P18627 525 aa20.31■□□□□ 0.84
VCX3A-203ENST00000612369 KCNA5P22460 613 aa20.31■□□□□ 0.84
VCX3A-203ENST00000612369 LAMTOR4Q0VGL1 99 aa20.31■□□□□ 0.84
VCX3A-203ENST00000612369 CAMK1Q14012 370 aa20.31■□□□□ 0.84
VCX3A-203ENST00000612369 MXD4Q14582 209 aaPredicted RBP20.31■□□□□ 0.84
VCX3A-203ENST00000612369 CATSPER4Q7RTX7 472 aa20.31■□□□□ 0.84
VCX3A-203ENST00000612369 LRRC43Q8N309 656 aa20.31■□□□□ 0.84
VCX3A-203ENST00000612369 POF1BQ8WVV4 589 aa20.31■□□□□ 0.84
VCX3A-203ENST00000612369 TMEM143Q96AN5 459 aa20.31■□□□□ 0.84
VCX3A-203ENST00000612369 CWH43Q9H720 699 aa20.31■□□□□ 0.84
VCX3A-203ENST00000612369 RNF19AQ9NV58 838 aa20.31■□□□□ 0.84
VCX3A-203ENST00000612369 NOL7Q9UMY1 257 aaKnown RBP20.31■□□□□ 0.84
VCX3A-203ENST00000612369 TCF20Q9UGU0 1960 aaKnown RBP20.31■□□□□ 0.84
VCX3A-203ENST00000612369 MUC3AQ02505 3323 aa20.31■□□□□ 0.84
VCX3A-203ENST00000612369 MYO7AQ13402 2215 aa20.3■□□□□ 0.84
VCX3A-203ENST00000612369 ZBTB39O15060 712 aa20.3■□□□□ 0.84
VCX3A-203ENST00000612369 ZNF623O75123 536 aa20.3■□□□□ 0.84
VCX3A-203ENST00000612369 U2AF2P26368 475 aaKnown RBP eCLIP20.3■□□□□ 0.84
VCX3A-203ENST00000612369 PHKA2P46019 1235 aa20.3■□□□□ 0.84
VCX3A-203ENST00000612369 RAB27AP51159 221 aa20.3■□□□□ 0.84
VCX3A-203ENST00000612369 PCBP1Q15365 356 aaKnown RBP eCLIP20.3■□□□□ 0.84
VCX3A-203ENST00000612369 TWF2Q6IBS0 349 aaKnown RBP20.3■□□□□ 0.84
VCX3A-203ENST00000612369 FERMT3Q86UX7 667 aa20.3■□□□□ 0.84
VCX3A-203ENST00000612369 COLGALT1Q8NBJ5 622 aa20.3■□□□□ 0.84
VCX3A-203ENST00000612369 CCDC43Q96MW1 224 aaKnown RBP20.3■□□□□ 0.84
VCX3A-203ENST00000612369 MRPL9Q9BYD2 267 aaKnown RBP20.3■□□□□ 0.84
VCX3A-203ENST00000612369 TUFT1Q9NNX1 390 aa20.3■□□□□ 0.84
VCX3A-203ENST00000612369 PIN4Q9Y237 131 aaKnown RBP20.3■□□□□ 0.84
VCX3A-203ENST00000612369 POTEMA6NI47 508 aa20.29■□□□□ 0.84
VCX3A-203ENST00000612369 OR52Z1P0C646 297 aa20.29■□□□□ 0.84
VCX3A-203ENST00000612369 SRGAP2CP0DJJ0 459 aa20.29■□□□□ 0.84
VCX3A-203ENST00000612369 DNAJB1P25685 340 aa20.29■□□□□ 0.84
VCX3A-203ENST00000612369 MCM2P49736 904 aa20.29■□□□□ 0.84
VCX3A-203ENST00000612369 POU5F1BQ06416 359 aa20.29■□□□□ 0.84
VCX3A-203ENST00000612369 ZNF174Q15697 407 aa20.29■□□□□ 0.84
VCX3A-203ENST00000612369 CTC1Q2NKJ3 1217 aa20.29■□□□□ 0.84
VCX3A-203ENST00000612369 TTC38Q5R3I4 469 aa20.29■□□□□ 0.84
VCX3A-203ENST00000612369 THNSL1Q8IYQ7 743 aa20.29■□□□□ 0.84
VCX3A-203ENST00000612369 RNF169Q8NCN4 708 aa20.29■□□□□ 0.84
VCX3A-203ENST00000612369 ERMNQ8TAM6 284 aa20.29■□□□□ 0.84
VCX3A-203ENST00000612369 LZTS1Q9Y250 596 aa20.29■□□□□ 0.84
VCX3A-203ENST00000612369 ARID2Q68CP9 1835 aa20.29■□□□□ 0.84
VCX3A-203ENST00000612369 ATG2AQ2TAZ0 1938 aa20.28■□□□□ 0.84
VCX3A-203ENST00000612369 CARNS1A5YM72 827 aa20.28■□□□□ 0.84
VCX3A-203ENST00000612369 FGF18O76093 207 aa20.28■□□□□ 0.84
VCX3A-203ENST00000612369 ATF7P17544 494 aaPredicted RBP20.28■□□□□ 0.84
VCX3A-203ENST00000612369 PPM1AP35813 382 aa20.28■□□□□ 0.84
VCX3A-203ENST00000612369 RARRES1P49788 294 aa20.28■□□□□ 0.84
VCX3A-203ENST00000612369 PLCB3Q01970 1234 aa20.28■□□□□ 0.84
VCX3A-203ENST00000612369 HYAL1Q12794 435 aa20.28■□□□□ 0.84
VCX3A-203ENST00000612369 TFDP1Q14186 410 aa20.28■□□□□ 0.84
VCX3A-203ENST00000612369 CLLU1OSQ5K130 101 aa20.28■□□□□ 0.84
VCX3A-203ENST00000612369 PDE12Q6L8Q7 609 aaKnown RBP20.28■□□□□ 0.84
VCX3A-203ENST00000612369 RNF149Q8NC42 400 aa20.28■□□□□ 0.84
VCX3A-203ENST00000612369 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.28■□□□□ 0.84
VCX3A-203ENST00000612369 POLR3CQ9BUI4 534 aaPredicted RBP20.28■□□□□ 0.84
VCX3A-203ENST00000612369 XPNPEP1Q9NQW7 623 aa20.28■□□□□ 0.84
VCX3A-203ENST00000612369 BMP2KQ9NSY1 1161 aaPredicted RBP20.28■□□□□ 0.84
VCX3A-203ENST00000612369 AGPAT5Q9NUQ2 364 aa20.28■□□□□ 0.84
VCX3A-203ENST00000612369 FAM105AQ9NUU6 356 aa20.28■□□□□ 0.84
VCX3A-203ENST00000612369 CLDND1Q9NY35 253 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms